RNA–Protein interactions for RNA: ENST00000340019.4

TMC1-202, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TMC1, Length 3,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-202ENST00000340019 A0A0G2JLL6 359 aaPredicted RBP9□□□□□ -0.97
TMC1-202ENST00000340019 CXCL11O14625 94 aa9□□□□□ -0.97
TMC1-202ENST00000340019 CELF2O95319 508 aaKnown RBP9□□□□□ -0.97
TMC1-202ENST00000340019 NAPAP54920 295 aa9□□□□□ -0.97
TMC1-202ENST00000340019 MYSM1Q5VVJ2 828 aa9□□□□□ -0.97
TMC1-202ENST00000340019 PRRT2Q7Z6L0 340 aaPredicted RBP9□□□□□ -0.97
TMC1-202ENST00000340019 KIFC2Q96AC6 838 aa9□□□□□ -0.97
TMC1-202ENST00000340019 COA7Q96BR5 231 aa9□□□□□ -0.97
TMC1-202ENST00000340019 OPTNQ96CV9 577 aa9□□□□□ -0.97
TMC1-202ENST00000340019 OTUD5Q96G74 571 aa9□□□□□ -0.97
TMC1-202ENST00000340019 SLF1Q9BQI6 1058 aa9□□□□□ -0.97
TMC1-202ENST00000340019 CNPY2Q9Y2B0 182 aa9□□□□□ -0.97
TMC1-202ENST00000340019 SNAP25P60880 206 aa9□□□□□ -0.97
TMC1-202ENST00000340019 ATL3Q6DD88 541 aa9□□□□□ -0.97
TMC1-202ENST00000340019 BLIDQ8IZY5 108 aa9□□□□□ -0.97
TMC1-202ENST00000340019 PRPF38AQ8NAV1 312 aaKnown RBP9□□□□□ -0.97
TMC1-202ENST00000340019 TMEM87AQ8NBN3 555 aa9□□□□□ -0.97
TMC1-202ENST00000340019 AMNQ9BXJ7 453 aa9□□□□□ -0.97
TMC1-202ENST00000340019 GPBP1L1Q9HC44 474 aaPredicted RBP9□□□□□ -0.97
TMC1-202ENST00000340019 BRMS1Q9HCU9 246 aa9□□□□□ -0.97
TMC1-202ENST00000340019 TMOD4Q9NZQ9 345 aa9□□□□□ -0.97
TMC1-202ENST00000340019 PPP1R9AQ9ULJ8 1098 aa9□□□□□ -0.97
TMC1-202ENST00000340019 COL11A1P12107 1806 aaPredicted RBP9□□□□□ -0.97
TMC1-202ENST00000340019 SMCO2A6NFE2 343 aa8.99□□□□□ -0.97
TMC1-202ENST00000340019 KIF3CO14782 793 aa8.99□□□□□ -0.97
TMC1-202ENST00000340019 GJA5P36382 358 aa8.99□□□□□ -0.97
TMC1-202ENST00000340019 KRT85P78386 507 aa8.99□□□□□ -0.97
TMC1-202ENST00000340019 EARS2Q5JPH6 523 aaKnown RBP8.99□□□□□ -0.97
TMC1-202ENST00000340019 CATSPERGQ6ZRH7 1159 aa8.99□□□□□ -0.97
TMC1-202ENST00000340019 TANGO6Q9C0B7 1094 aa8.99□□□□□ -0.97
TMC1-202ENST00000340019 PASKQ96RG2 1323 aa8.99□□□□□ -0.97
TMC1-202ENST00000340019 GNA11P29992 359 aa8.99□□□□□ -0.97
TMC1-202ENST00000340019 MOGSQ13724 837 aa8.99□□□□□ -0.97
TMC1-202ENST00000340019 GNL2Q13823 731 aaKnown RBP8.99□□□□□ -0.97
TMC1-202ENST00000340019 FBXO11Q86XK2 927 aa8.99□□□□□ -0.97
TMC1-202ENST00000340019 C2orf69Q8N8R5 385 aa8.99□□□□□ -0.97
TMC1-202ENST00000340019 USP28Q96RU2 1077 aa8.99□□□□□ -0.97
TMC1-202ENST00000340019 C6orf50Q9HD87 102 aa8.99□□□□□ -0.97
TMC1-202ENST00000340019 PCDHA6Q9UN73 950 aa8.99□□□□□ -0.97
TMC1-202ENST00000340019 ADAMTS5Q9UNA0 930 aa8.99□□□□□ -0.97
TMC1-202ENST00000340019 PCDHA8Q9Y5H6 950 aa8.99□□□□□ -0.97
TMC1-202ENST00000340019 PCDHA1Q9Y5I3 950 aa8.99□□□□□ -0.97
TMC1-202ENST00000340019 ZNF536O15090 1300 aa8.99□□□□□ -0.97
TMC1-202ENST00000340019 A0A0G2JMZ2 1700 aa8.99□□□□□ -0.97
TMC1-202ENST00000340019 DDX11L8A8MPP1 907 aa8.99□□□□□ -0.97
TMC1-202ENST00000340019 FLOT1O75955 427 aa8.99□□□□□ -0.97
TMC1-202ENST00000340019 TOB1P50616 345 aaPredicted RBP8.99□□□□□ -0.97
TMC1-202ENST00000340019 PROCA1Q8NCQ7 364 aaPredicted RBP8.99□□□□□ -0.97
TMC1-202ENST00000340019 SLC38A10Q9HBR0 1119 aa8.99□□□□□ -0.97
TMC1-202ENST00000340019 GDPD2Q9HCC8 539 aa8.99□□□□□ -0.97
TMC1-202ENST00000340019 RIC8AQ9NPQ8 531 aa8.99□□□□□ -0.97
TMC1-202ENST00000340019 LMBRD1Q9NUN5 540 aa8.99□□□□□ -0.97
TMC1-202ENST00000340019 CFAP45Q9UL16 551 aa8.99□□□□□ -0.97
TMC1-202ENST00000340019 NOM1Q5C9Z4 860 aaKnown RBP8.98□□□□□ -0.97
TMC1-202ENST00000340019 TREML2Q5T2D2 321 aa8.98□□□□□ -0.97
TMC1-202ENST00000340019 SLC10A4Q96EP9 437 aa8.98□□□□□ -0.97
TMC1-202ENST00000340019 ZNF396Q96N95 335 aaPredicted RBP8.98□□□□□ -0.97
TMC1-202ENST00000340019 FTOQ9C0B1 505 aaKnown RBP eCLIP8.98□□□□□ -0.97
TMC1-202ENST00000340019 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.98□□□□□ -0.97
TMC1-202ENST00000340019 TFIP11Q9UBB9 837 aaKnown RBP8.98□□□□□ -0.97
TMC1-202ENST00000340019 ELP1O95163 1332 aa8.98□□□□□ -0.97
TMC1-202ENST00000340019 MYPNQ86TC9 1320 aa8.98□□□□□ -0.97
TMC1-202ENST00000340019 FAM205CA6NFA0 338 aa8.98□□□□□ -0.97
TMC1-202ENST00000340019 USP17L15C9J2P7 530 aa8.98□□□□□ -0.97
TMC1-202ENST00000340019 USP17L13C9JLJ4 530 aa8.98□□□□□ -0.97
TMC1-202ENST00000340019 USP17L11C9JVI0 530 aa8.98□□□□□ -0.97
TMC1-202ENST00000340019 USP17L18D6R9N7 530 aa8.98□□□□□ -0.97
TMC1-202ENST00000340019 USP17L22D6RA61 530 aa8.98□□□□□ -0.97
TMC1-202ENST00000340019 USP17L17D6RBQ6 530 aa8.98□□□□□ -0.97
TMC1-202ENST00000340019 USP17L19D6RCP7 530 aa8.98□□□□□ -0.97
TMC1-202ENST00000340019 USP17L20D6RJB6 530 aa8.98□□□□□ -0.97
TMC1-202ENST00000340019 OPLAHO14841 1288 aa8.98□□□□□ -0.97
TMC1-202ENST00000340019 ICAM1P05362 532 aa8.98□□□□□ -0.97
TMC1-202ENST00000340019 FDX1P10109 184 aa8.98□□□□□ -0.97
TMC1-202ENST00000340019 HOXA7P31268 230 aaPredicted RBP8.98□□□□□ -0.97
TMC1-202ENST00000340019 DSG3P32926 999 aa8.98□□□□□ -0.97
TMC1-202ENST00000340019 CLK2P49760 499 aaKnown RBP8.98□□□□□ -0.97
TMC1-202ENST00000340019 USP17L24Q0WX57 530 aa8.98□□□□□ -0.97
TMC1-202ENST00000340019 RILPL1Q5EBL4 403 aa8.98□□□□□ -0.97
TMC1-202ENST00000340019 REPS2Q8NFH8 660 aa8.98□□□□□ -0.97
TMC1-202ENST00000340019 BICD2Q8TD16 824 aa8.98□□□□□ -0.97
TMC1-202ENST00000340019 RASGRP4Q8TDF6 673 aa8.98□□□□□ -0.97
TMC1-202ENST00000340019 SCAND2PQ9GZW5 306 aaPredicted RBP8.98□□□□□ -0.97
TMC1-202ENST00000340019 POLR3EQ9NVU0 708 aa8.98□□□□□ -0.97
TMC1-202ENST00000340019 RTEL1Q9NZ71 1219 aa8.98□□□□□ -0.97
TMC1-202ENST00000340019 GOLGA6L22H0YM25 854 aa8.97□□□□□ -0.97
TMC1-202ENST00000340019 VWA5AO00534 786 aa8.97□□□□□ -0.97
TMC1-202ENST00000340019 FIBPO43427 364 aa8.97□□□□□ -0.97
TMC1-202ENST00000340019 NCLP19338 710 aaKnown RBP8.97□□□□□ -0.97
TMC1-202ENST00000340019 NASPP49321 788 aaPredicted RBP8.97□□□□□ -0.97
TMC1-202ENST00000340019 ADCY7P51828 1080 aa8.97□□□□□ -0.97
TMC1-202ENST00000340019 TRAF1Q13077 416 aa8.97□□□□□ -0.97
TMC1-202ENST00000340019 COG2Q14746 738 aa8.97□□□□□ -0.97
TMC1-202ENST00000340019 USH1GQ495M9 461 aa8.97□□□□□ -0.97
TMC1-202ENST00000340019 CCDC174Q6PII3 467 aa8.97□□□□□ -0.97
TMC1-202ENST00000340019 LEO1Q8WVC0 666 aaPredicted RBP8.97□□□□□ -0.97
TMC1-202ENST00000340019 CUL5Q93034 780 aa8.97□□□□□ -0.97
TMC1-202ENST00000340019 WNK4Q96J92 1243 aa8.97□□□□□ -0.97
TMC1-202ENST00000340019 RCOR1Q9UKL0 485 aa8.97□□□□□ -0.97
TMC1-202ENST00000340019 PRPF40AO75400 957 aaKnown RBP8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms