RNA–Protein interactions for RNA: ENST00000339754.10

NECAP1-201, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NECAP1, Length 2,593 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-201ENST00000339754 PIP4K2AP48426 406 aaPredicted RBP10.48□□□□□ -0.73
NECAP1-201ENST00000339754 CLNS1AP54105 237 aaKnown RBP10.48□□□□□ -0.73
NECAP1-201ENST00000339754 CYP27A1Q02318 531 aa10.48□□□□□ -0.73
NECAP1-201ENST00000339754 TBC1D8BQ0IIM8 1120 aa10.48□□□□□ -0.73
NECAP1-201ENST00000339754 ITGB3BPQ13352 177 aaPredicted RBP10.48□□□□□ -0.73
NECAP1-201ENST00000339754 TSR1Q2NL82 804 aaKnown RBP10.48□□□□□ -0.73
NECAP1-201ENST00000339754 CFAP58Q5T655 872 aa10.48□□□□□ -0.73
NECAP1-201ENST00000339754 PPP4R3AQ6IN85 833 aa10.48□□□□□ -0.73
NECAP1-201ENST00000339754 ZNF790Q6PG37 636 aa10.48□□□□□ -0.73
NECAP1-201ENST00000339754 CCDC170Q8IYT3 715 aa10.48□□□□□ -0.73
NECAP1-201ENST00000339754 SMCR8Q8TEV9 937 aaPredicted RBP10.48□□□□□ -0.73
NECAP1-201ENST00000339754 CYFIP2Q96F07 1278 aa10.48□□□□□ -0.73
NECAP1-201ENST00000339754 ZNF594Q96JF6 807 aaPredicted RBP10.48□□□□□ -0.73
NECAP1-201ENST00000339754 BLZF1Q9H2G9 400 aa10.48□□□□□ -0.73
NECAP1-201ENST00000339754 INCENPQ9NQS7 918 aa10.48□□□□□ -0.73
NECAP1-201ENST00000339754 AGPAT5Q9NUQ2 364 aa10.48□□□□□ -0.73
NECAP1-201ENST00000339754 SMARCAL1Q9NZC9 954 aa10.48□□□□□ -0.73
NECAP1-201ENST00000339754 LGALS16A8MUM7 142 aa10.47□□□□□ -0.73
NECAP1-201ENST00000339754 E7EVH7 732 aa10.47□□□□□ -0.73
NECAP1-201ENST00000339754 ZNF263O14978 683 aa10.47□□□□□ -0.73
NECAP1-201ENST00000339754 EZRP15311 586 aaKnown RBP10.47□□□□□ -0.73
NECAP1-201ENST00000339754 LIFRP42702 1097 aa10.47□□□□□ -0.73
NECAP1-201ENST00000339754 IRX1P78414 480 aaPredicted RBP10.47□□□□□ -0.73
NECAP1-201ENST00000339754 TMEM67Q5HYA8 995 aa10.47□□□□□ -0.73
NECAP1-201ENST00000339754 CCDC121Q6ZUS5 278 aa10.47□□□□□ -0.73
NECAP1-201ENST00000339754 RNF217Q8TC41 542 aa10.47□□□□□ -0.73
NECAP1-201ENST00000339754 ATP6V1G3Q96LB4 118 aa10.47□□□□□ -0.73
NECAP1-201ENST00000339754 OSBPL9Q96SU4 736 aa10.47□□□□□ -0.73
NECAP1-201ENST00000339754 MTRQ99707 1265 aa10.47□□□□□ -0.73
NECAP1-201ENST00000339754 PUS3Q9BZE2 481 aaKnown RBP10.47□□□□□ -0.73
NECAP1-201ENST00000339754 TTYH3Q9C0H2 523 aa10.47□□□□□ -0.73
NECAP1-201ENST00000339754 HAUS2Q9NVX0 235 aa10.47□□□□□ -0.73
NECAP1-201ENST00000339754 DCCP43146 1447 aa10.47□□□□□ -0.73
NECAP1-201ENST00000339754 A0A1B0GUA9 196 aa10.47□□□□□ -0.73
NECAP1-201ENST00000339754 FAM205CA6NFA0 338 aa10.47□□□□□ -0.73
NECAP1-201ENST00000339754 H7C1D1 291 aa10.47□□□□□ -0.73
NECAP1-201ENST00000339754 CLSTN1O94985 981 aa10.47□□□□□ -0.73
NECAP1-201ENST00000339754 ADORA1P30542 326 aa10.47□□□□□ -0.73
NECAP1-201ENST00000339754 ZAP70P43403 619 aa10.47□□□□□ -0.73
NECAP1-201ENST00000339754 CARSP49589 748 aaKnown RBP10.47□□□□□ -0.73
NECAP1-201ENST00000339754 CCNHP51946 323 aaPredicted RBP10.47□□□□□ -0.73
NECAP1-201ENST00000339754 VAV2P52735 878 aa10.47□□□□□ -0.73
NECAP1-201ENST00000339754 E2F5Q15329 346 aa10.47□□□□□ -0.73
NECAP1-201ENST00000339754 ANKRD20A8PQ5CZ79 823 aa10.47□□□□□ -0.73
NECAP1-201ENST00000339754 DHX37Q8IY37 1157 aaKnown RBP10.47□□□□□ -0.73
NECAP1-201ENST00000339754 KIRREL3Q8IZU9 778 aa10.47□□□□□ -0.73
NECAP1-201ENST00000339754 MREGQ8N565 214 aa10.47□□□□□ -0.73
NECAP1-201ENST00000339754 GDF3Q9NR23 364 aa10.47□□□□□ -0.73
NECAP1-201ENST00000339754 EHD2Q9NZN4 543 aa10.47□□□□□ -0.73
NECAP1-201ENST00000339754 IQSEC3Q9UPP2 1182 aaPredicted RBP10.47□□□□□ -0.73
NECAP1-201ENST00000339754 SLC12A7Q9Y666 1083 aa10.47□□□□□ -0.73
NECAP1-201ENST00000339754 CAPN6Q9Y6Q1 641 aa10.47□□□□□ -0.73
NECAP1-201ENST00000339754 ALS2Q96Q42 1657 aa10.47□□□□□ -0.73
NECAP1-201ENST00000339754 GOLGA6L7A0A1B0GV03 622 aa10.46□□□□□ -0.73
NECAP1-201ENST00000339754 FRMD3A2A2Y4 597 aa10.46□□□□□ -0.73
NECAP1-201ENST00000339754 SSBP05455 408 aaKnown RBP eCLIP10.46□□□□□ -0.73
NECAP1-201ENST00000339754 GLI1P08151 1106 aa10.46□□□□□ -0.73
NECAP1-201ENST00000339754 CTDSPL2Q05D32 466 aa10.46□□□□□ -0.73
NECAP1-201ENST00000339754 KIF5AQ12840 1032 aa10.46□□□□□ -0.73
NECAP1-201ENST00000339754 CHRNA2Q15822 529 aa10.46□□□□□ -0.73
NECAP1-201ENST00000339754 GLE1Q53GS7 698 aaKnown RBP10.46□□□□□ -0.73
NECAP1-201ENST00000339754 MAB21L3Q8N8X9 362 aa10.46□□□□□ -0.73
NECAP1-201ENST00000339754 TRIM58Q8NG06 486 aa10.46□□□□□ -0.73
NECAP1-201ENST00000339754 SHISA4Q96DD7 197 aa10.46□□□□□ -0.73
NECAP1-201ENST00000339754 SCLT1Q96NL6 688 aa10.46□□□□□ -0.73
NECAP1-201ENST00000339754 PARP4Q9UKK3 1724 aaKnown RBP10.46□□□□□ -0.74
NECAP1-201ENST00000339754 TRIM75PA6NK02 468 aa10.46□□□□□ -0.74
NECAP1-201ENST00000339754 MGRN1O60291 552 aa10.46□□□□□ -0.74
NECAP1-201ENST00000339754 CXCR5P32302 372 aa10.46□□□□□ -0.74
NECAP1-201ENST00000339754 PRCPP42785 496 aa10.46□□□□□ -0.74
NECAP1-201ENST00000339754 XRCC4Q13426 336 aa10.46□□□□□ -0.74
NECAP1-201ENST00000339754 LACTB2Q53H82 288 aaPredicted RBP10.46□□□□□ -0.74
NECAP1-201ENST00000339754 EARS2Q5JPH6 523 aaKnown RBP10.46□□□□□ -0.74
NECAP1-201ENST00000339754 ZNF658Q5TYW1 1059 aaPredicted RBP10.46□□□□□ -0.74
NECAP1-201ENST00000339754 NFRKBQ6P4R8 1299 aa10.46□□□□□ -0.74
NECAP1-201ENST00000339754 CRACR2BQ8N4Y2 399 aaPredicted RBP10.46□□□□□ -0.74
NECAP1-201ENST00000339754 PPANQ9NQ55 473 aaKnown RBP10.46□□□□□ -0.74
NECAP1-201ENST00000339754 RBM12Q9NTZ6 932 aaKnown RBP10.46□□□□□ -0.74
NECAP1-201ENST00000339754 NLRP2Q9NX02 1062 aa10.46□□□□□ -0.74
NECAP1-201ENST00000339754 ZSWIM5Q9P217 1185 aa10.46□□□□□ -0.74
NECAP1-201ENST00000339754 LRWD1Q9UFC0 647 aa10.46□□□□□ -0.74
NECAP1-201ENST00000339754 NFU1Q9UMS0 254 aa10.46□□□□□ -0.74
NECAP1-201ENST00000339754 MAPK8IP1Q9UQF2 711 aa10.46□□□□□ -0.74
NECAP1-201ENST00000339754 RGPD5Q99666 1765 aa10.46□□□□□ -0.74
NECAP1-201ENST00000339754 LMTK3Q96Q04 1460 aa10.46□□□□□ -0.74
NECAP1-201ENST00000339754 PDS5AQ29RF7 1337 aaKnown RBP10.45□□□□□ -0.74
NECAP1-201ENST00000339754 ZNF335Q9H4Z2 1342 aaPredicted RBP10.45□□□□□ -0.74
NECAP1-201ENST00000339754 MYH10P35580 1976 aa10.45□□□□□ -0.74
NECAP1-201ENST00000339754 GMNCA6NCL1 334 aa10.45□□□□□ -0.74
NECAP1-201ENST00000339754 HMGB1P1B2RPK0 211 aaPredicted RBP10.45□□□□□ -0.74
NECAP1-201ENST00000339754 WNT7AO00755 349 aa10.45□□□□□ -0.74
NECAP1-201ENST00000339754 CIAO1O76071 339 aa10.45□□□□□ -0.74
NECAP1-201ENST00000339754 TCP1P17987 556 aaKnown RBP10.45□□□□□ -0.74
NECAP1-201ENST00000339754 CALRP27797 417 aaKnown RBP10.45□□□□□ -0.74
NECAP1-201ENST00000339754 SLC8A1P32418 973 aa10.45□□□□□ -0.74
NECAP1-201ENST00000339754 SLC8A3P57103 927 aa10.45□□□□□ -0.74
NECAP1-201ENST00000339754 BYSLQ13895 437 aaKnown RBP10.45□□□□□ -0.74
NECAP1-201ENST00000339754 QPCTQ16769 361 aa10.45□□□□□ -0.74
NECAP1-201ENST00000339754 PDXDC2PQ6P474 469 aa10.45□□□□□ -0.74
NECAP1-201ENST00000339754 PI16Q6UXB8 463 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms