RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 L2HGDHQ9H9P8 463 aa18.47■□□□□ 0.55
LITAF-201ENST00000339430 SAP30BPQ9UHR5 308 aaKnown RBP18.47■□□□□ 0.55
LITAF-201ENST00000339430 PPP2R2CQ9Y2T4 447 aa18.47■□□□□ 0.55
LITAF-201ENST00000339430 RBM5P52756 815 aaKnown RBP eCLIP18.47■□□□□ 0.55
LITAF-201ENST00000339430 SPATA1Q5VX52 437 aa18.47■□□□□ 0.55
LITAF-201ENST00000339430 TOGARAM2Q6ZUX3 1019 aa18.47■□□□□ 0.55
LITAF-201ENST00000339430 JDP2Q8WYK2 163 aa18.47■□□□□ 0.55
LITAF-201ENST00000339430 CTNND2Q9UQB3 1225 aa18.47■□□□□ 0.55
LITAF-201ENST00000339430 PCDHAC2Q9Y5I4 1007 aa18.47■□□□□ 0.55
LITAF-201ENST00000339430 PPP1R3GB7ZBB8 358 aa18.46■□□□□ 0.55
LITAF-201ENST00000339430 RASSF7Q02833 373 aa18.46■□□□□ 0.55
LITAF-201ENST00000339430 ERCC6LQ2NKX8 1250 aa18.46■□□□□ 0.55
LITAF-201ENST00000339430 KMT5BQ4FZB7 885 aa18.46■□□□□ 0.55
LITAF-201ENST00000339430 APOBEC3HQ6NTF7 200 aaKnown RBP18.46■□□□□ 0.55
LITAF-201ENST00000339430 BLIDQ8IZY5 108 aa18.46■□□□□ 0.55
LITAF-201ENST00000339430 GSDMAQ96QA5 445 aa18.46■□□□□ 0.55
LITAF-201ENST00000339430 CDK5RAP2Q96SN8 1893 aa18.46■□□□□ 0.55
LITAF-201ENST00000339430 A0A1B0GTH6 734 aa18.46■□□□□ 0.55
LITAF-201ENST00000339430 ZSCAN12O43309 604 aa18.46■□□□□ 0.55
LITAF-201ENST00000339430 E2F4Q16254 413 aa18.46■□□□□ 0.55
LITAF-201ENST00000339430 TYW1BQ6NUM6 668 aa18.46■□□□□ 0.55
LITAF-201ENST00000339430 RSBN1LQ6PCB5 846 aaPredicted RBP18.46■□□□□ 0.55
LITAF-201ENST00000339430 APTXQ7Z2E3 356 aaKnown RBP18.46■□□□□ 0.55
LITAF-201ENST00000339430 CPLX3Q8WVH0 158 aa18.46■□□□□ 0.55
LITAF-201ENST00000339430 DESI2Q9BSY9 194 aa18.46■□□□□ 0.55
LITAF-201ENST00000339430 USP40Q9NVE5 1235 aa18.46■□□□□ 0.55
LITAF-201ENST00000339430 FLT1P17948 1338 aa18.45■□□□□ 0.54
LITAF-201ENST00000339430 TSPY3P0CV98 308 aa18.45■□□□□ 0.54
LITAF-201ENST00000339430 TSPY8P0CW00 308 aa18.45■□□□□ 0.54
LITAF-201ENST00000339430 FBXO38Q6PIJ6 1188 aa18.45■□□□□ 0.54
LITAF-201ENST00000339430 RASGRP2Q7LDG7 609 aa18.45■□□□□ 0.54
LITAF-201ENST00000339430 IQUBQ8NA54 791 aa18.45■□□□□ 0.54
LITAF-201ENST00000339430 ZDHHC15Q96MV8 337 aa18.45■□□□□ 0.54
LITAF-201ENST00000339430 MTRQ99707 1265 aa18.45■□□□□ 0.54
LITAF-201ENST00000339430 STX8Q9UNK0 236 aa18.45■□□□□ 0.54
LITAF-201ENST00000339430 ZBTB12Q9Y330 459 aaPredicted RBP18.45■□□□□ 0.54
LITAF-201ENST00000339430 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.45■□□□□ 0.54
LITAF-201ENST00000339430 PSME4Q14997 1843 aa18.45■□□□□ 0.54
LITAF-201ENST00000339430 PHLPP2Q6ZVD8 1323 aa18.45■□□□□ 0.54
LITAF-201ENST00000339430 VIL1P09327 827 aaKnown RBP18.45■□□□□ 0.54
LITAF-201ENST00000339430 CDC42EP5Q6NZY7 148 aa18.45■□□□□ 0.54
LITAF-201ENST00000339430 ZNF397Q8NF99 534 aaPredicted RBP18.45■□□□□ 0.54
LITAF-201ENST00000339430 MRIQ9BWK5 157 aa18.45■□□□□ 0.54
LITAF-201ENST00000339430 NAV1Q8NEY1 1877 aa18.44■□□□□ 0.54
LITAF-201ENST00000339430 STX10O60499 249 aa18.44■□□□□ 0.54
LITAF-201ENST00000339430 URI1O94763 535 aaPredicted RBP18.44■□□□□ 0.54
LITAF-201ENST00000339430 TRAPPC10P48553 1259 aa18.44■□□□□ 0.54
LITAF-201ENST00000339430 HDLBPQ00341 1268 aaKnown RBP18.44■□□□□ 0.54
LITAF-201ENST00000339430 CXCL9Q07325 125 aa18.44■□□□□ 0.54
LITAF-201ENST00000339430 PICALMQ13492 652 aa18.44■□□□□ 0.54
LITAF-201ENST00000339430 MTF1Q14872 753 aa18.44■□□□□ 0.54
LITAF-201ENST00000339430 PDXDC2PQ6P474 469 aa18.44■□□□□ 0.54
LITAF-201ENST00000339430 FCHSD1Q86WN1 690 aa18.44■□□□□ 0.54
LITAF-201ENST00000339430 DGKHQ86XP1 1220 aa18.44■□□□□ 0.54
LITAF-201ENST00000339430 MAD2L2Q9UI95 211 aa18.44■□□□□ 0.54
LITAF-201ENST00000339430 ARFGEF1Q9Y6D6 1849 aa18.44■□□□□ 0.54
LITAF-201ENST00000339430 GOLGA8HP0CJ92 632 aa18.44■□□□□ 0.54
LITAF-201ENST00000339430 SLC35G1Q2M3R5 365 aa18.44■□□□□ 0.54
LITAF-201ENST00000339430 RRAGBQ5VZM2 374 aa18.44■□□□□ 0.54
LITAF-201ENST00000339430 SMAP1Q8IYB5 467 aaPredicted RBP18.44■□□□□ 0.54
LITAF-201ENST00000339430 ZNF444Q8N0Y2 327 aaPredicted RBP18.44■□□□□ 0.54
LITAF-201ENST00000339430 CPVLQ9H3G5 476 aa18.44■□□□□ 0.54
LITAF-201ENST00000339430 SERPINA10Q9UK55 444 aa18.44■□□□□ 0.54
LITAF-201ENST00000339430 PCDHA4Q9UN74 947 aa18.44■□□□□ 0.54
LITAF-201ENST00000339430 MYO3BQ8WXR4 1341 aa18.43■□□□□ 0.54
LITAF-201ENST00000339430 LTBP3Q9NS15 1303 aa18.43■□□□□ 0.54
LITAF-201ENST00000339430 CALML3P27482 149 aa18.43■□□□□ 0.54
LITAF-201ENST00000339430 PRELPP51888 382 aa18.43■□□□□ 0.54
LITAF-201ENST00000339430 HEATR3Q7Z4Q2 680 aa18.43■□□□□ 0.54
LITAF-201ENST00000339430 CREBRFQ8IUR6 639 aa18.43■□□□□ 0.54
LITAF-201ENST00000339430 AMOTL1Q8IY63 956 aa18.43■□□□□ 0.54
LITAF-201ENST00000339430 IGSF22Q8N9C0 903 aa18.43■□□□□ 0.54
LITAF-201ENST00000339430 SYT17Q9BSW7 474 aa18.43■□□□□ 0.54
LITAF-201ENST00000339430 MAPK8IP1Q9UQF2 711 aa18.43■□□□□ 0.54
LITAF-201ENST00000339430 CYTH3O43739 400 aa18.42■□□□□ 0.54
LITAF-201ENST00000339430 TUBB4AP04350 444 aa18.42■□□□□ 0.54
LITAF-201ENST00000339430 CCT6AP40227 531 aaKnown RBP18.42■□□□□ 0.54
LITAF-201ENST00000339430 RBL2Q08999 1139 aa18.42■□□□□ 0.54
LITAF-201ENST00000339430 GRM4Q14833 912 aa18.42■□□□□ 0.54
LITAF-201ENST00000339430 KARSQ15046 597 aaKnown RBP18.42■□□□□ 0.54
LITAF-201ENST00000339430 CDKAL1Q5VV42 579 aa18.42■□□□□ 0.54
LITAF-201ENST00000339430 FEZ1Q99689 392 aa18.42■□□□□ 0.54
LITAF-201ENST00000339430 ADD3Q9UEY8 706 aaKnown RBP18.42■□□□□ 0.54
LITAF-201ENST00000339430 SOWAHDA6NJG2 315 aa18.42■□□□□ 0.54
LITAF-201ENST00000339430 AKR1B15C9JRZ8 316 aaPredicted RBP18.42■□□□□ 0.54
LITAF-201ENST00000339430 WWC2Q6AWC2 1192 aa18.42■□□□□ 0.54
LITAF-201ENST00000339430 C4orf32Q8N8J7 132 aa18.42■□□□□ 0.54
LITAF-201ENST00000339430 GMLQ99445 158 aa18.42■□□□□ 0.54
LITAF-201ENST00000339430 DDX4Q9NQI0 724 aaKnown RBP18.42■□□□□ 0.54
LITAF-201ENST00000339430 MYH8P13535 1937 aa18.42■□□□□ 0.54
LITAF-201ENST00000339430 CCDC194A0A1B0GVG4 234 aa18.41■□□□□ 0.54
LITAF-201ENST00000339430 PP2D1A8MPX8 630 aa18.41■□□□□ 0.54
LITAF-201ENST00000339430 GNG11P61952 73 aa18.41■□□□□ 0.54
LITAF-201ENST00000339430 PLIN2Q99541 437 aa18.41■□□□□ 0.54
LITAF-201ENST00000339430 TMEM47Q9BQJ4 181 aa18.41■□□□□ 0.54
LITAF-201ENST00000339430 CACNB3P54284 484 aa18.41■□□□□ 0.54
LITAF-201ENST00000339430 INF2Q27J81 1249 aa18.41■□□□□ 0.54
LITAF-201ENST00000339430 CT47A1Q5JQC4 288 aaPredicted RBP18.41■□□□□ 0.54
LITAF-201ENST00000339430 CIAPIN1Q6FI81 312 aa18.41■□□□□ 0.54
LITAF-201ENST00000339430 PPFIBP1Q86W92 1011 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 177.2 ms