RNA–Protein interactions for RNA: ENST00000339350.7

DFFB-202, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 3,005 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-202ENST00000339350 RANBP17Q9H2T7 1088 aaKnown RBP14.05□□□□□ -0.16
DFFB-202ENST00000339350 EPB41L4AQ9HCS5 686 aaPredicted RBP14.05□□□□□ -0.16
DFFB-202ENST00000339350 HPCAL4Q9UM19 191 aa14.05□□□□□ -0.16
DFFB-202ENST00000339350 IQSEC3Q9UPP2 1182 aaPredicted RBP14.05□□□□□ -0.16
DFFB-202ENST00000339350 PIP4K2BP78356 416 aa14.04□□□□□ -0.16
DFFB-202ENST00000339350 PPFIA1Q13136 1202 aa14.04□□□□□ -0.16
DFFB-202ENST00000339350 SF3B2Q13435 895 aaKnown RBP14.04□□□□□ -0.16
DFFB-202ENST00000339350 MIGA1Q8NAN2 632 aa14.04□□□□□ -0.16
DFFB-202ENST00000339350 EPAS1Q99814 870 aa14.04□□□□□ -0.16
DFFB-202ENST00000339350 ISCA1Q9BUE6 129 aa14.04□□□□□ -0.16
DFFB-202ENST00000339350 NAPBQ9H115 298 aa14.04□□□□□ -0.16
DFFB-202ENST00000339350 CABP5Q9NP86 173 aa14.04□□□□□ -0.16
DFFB-202ENST00000339350 TPP2P29144 1249 aaPredicted RBP14.04□□□□□ -0.16
DFFB-202ENST00000339350 MDM2Q00987 491 aaPredicted RBP14.04□□□□□ -0.16
DFFB-202ENST00000339350 SPECC1LQ69YQ0 1117 aa14.04□□□□□ -0.16
DFFB-202ENST00000339350 CYB5D1Q6P9G0 228 aa14.04□□□□□ -0.16
DFFB-202ENST00000339350 MYH7P12883 1935 aa14.04□□□□□ -0.16
DFFB-202ENST00000339350 GLI3P10071 1580 aa14.04□□□□□ -0.16
DFFB-202ENST00000339350 ABL1P00519 1130 aa14.04□□□□□ -0.16
DFFB-202ENST00000339350 FAM163AQ96GL9 167 aaPredicted RBP14.04□□□□□ -0.16
DFFB-202ENST00000339350 RIPOR2Q9Y4F9 1068 aa14.04□□□□□ -0.16
DFFB-202ENST00000339350 ECM29Q5VYK3 1845 aa14.03□□□□□ -0.16
DFFB-202ENST00000339350 PRDM1O75626 825 aa14.03□□□□□ -0.16
DFFB-202ENST00000339350 KIF4BQ2VIQ3 1234 aa14.03□□□□□ -0.16
DFFB-202ENST00000339350 MIS18BP1Q6P0N0 1132 aa14.03□□□□□ -0.16
DFFB-202ENST00000339350 BZW1Q7L1Q6 419 aaKnown RBP14.03□□□□□ -0.16
DFFB-202ENST00000339350 TTLL11Q8NHH1 800 aa14.03□□□□□ -0.16
DFFB-202ENST00000339350 TBC1D31Q96DN5 1066 aa14.03□□□□□ -0.16
DFFB-202ENST00000339350 EPSTI1Q96J88 318 aa14.03□□□□□ -0.16
DFFB-202ENST00000339350 PLEKHG4BQ96PX9 1271 aa14.03□□□□□ -0.16
DFFB-202ENST00000339350 CSRNP2Q9H175 543 aa14.03□□□□□ -0.16
DFFB-202ENST00000339350 RIC1Q4ADV7 1423 aa14.03□□□□□ -0.16
DFFB-202ENST00000339350 AKAP11Q9UKA4 1901 aa14.03□□□□□ -0.16
DFFB-202ENST00000339350 SPDYE3A6NKU9 549 aa14.03□□□□□ -0.16
DFFB-202ENST00000339350 MYBL1P10243 752 aa14.03□□□□□ -0.16
DFFB-202ENST00000339350 IMPDH2P12268 514 aa14.03□□□□□ -0.16
DFFB-202ENST00000339350 FILIP1LQ4L180 1135 aa14.03□□□□□ -0.16
DFFB-202ENST00000339350 SLC30A9Q6PML9 568 aa14.03□□□□□ -0.16
DFFB-202ENST00000339350 EXOC8Q8IYI6 725 aa14.03□□□□□ -0.16
DFFB-202ENST00000339350 NUP188Q5SRE5 1749 aa14.03□□□□□ -0.16
DFFB-202ENST00000339350 ZSCAN9O15535 394 aaPredicted RBP14.02□□□□□ -0.16
DFFB-202ENST00000339350 TBX2Q13207 712 aaPredicted RBP14.02□□□□□ -0.16
DFFB-202ENST00000339350 STIM1Q13586 685 aa14.02□□□□□ -0.16
DFFB-202ENST00000339350 IFNL3Q8IZI9 196 aa14.02□□□□□ -0.16
DFFB-202ENST00000339350 STRBPQ96SI9 672 aaKnown RBP14.02□□□□□ -0.16
DFFB-202ENST00000339350 FBXO2Q9UK22 296 aaPredicted RBP14.02□□□□□ -0.16
DFFB-202ENST00000339350 ATXN2Q99700 1313 aaKnown RBP14.02□□□□□ -0.16
DFFB-202ENST00000339350 A0A087X0B3 334 aa14.02□□□□□ -0.17
DFFB-202ENST00000339350 SAFBQ15424 915 aaKnown RBP eCLIP14.02□□□□□ -0.17
DFFB-202ENST00000339350 AKNAD1Q5T1N1 836 aa14.02□□□□□ -0.17
DFFB-202ENST00000339350 RAD9BQ6WBX8 426 aa14.02□□□□□ -0.17
DFFB-202ENST00000339350 KIF6Q6ZMV9 814 aa14.02□□□□□ -0.17
DFFB-202ENST00000339350 NOA1Q8NC60 698 aaKnown RBP14.02□□□□□ -0.17
DFFB-202ENST00000339350 NSMCE1Q8WV22 266 aa14.02□□□□□ -0.17
DFFB-202ENST00000339350 CCDC114Q96M63 670 aa14.02□□□□□ -0.17
DFFB-202ENST00000339350 VIPAS39Q9H9C1 493 aa14.02□□□□□ -0.17
DFFB-202ENST00000339350 BATF3Q9NR55 127 aa14.02□□□□□ -0.17
DFFB-202ENST00000339350 CDC23Q9UJX2 597 aa14.02□□□□□ -0.17
DFFB-202ENST00000339350 PCDHGC5Q9Y5F6 944 aa14.02□□□□□ -0.17
DFFB-202ENST00000339350 ZC3H4Q9UPT8 1303 aaKnown RBP14.02□□□□□ -0.17
DFFB-202ENST00000339350 MMP1P03956 469 aa14.01□□□□□ -0.17
DFFB-202ENST00000339350 CD44P16070 742 aaKnown RBP14.01□□□□□ -0.17
DFFB-202ENST00000339350 CCT6AP40227 531 aaKnown RBP14.01□□□□□ -0.17
DFFB-202ENST00000339350 RBL2Q08999 1139 aa14.01□□□□□ -0.17
DFFB-202ENST00000339350 GET4Q7L5D6 327 aaPredicted RBP14.01□□□□□ -0.17
DFFB-202ENST00000339350 WNT7AO00755 349 aa14.01□□□□□ -0.17
DFFB-202ENST00000339350 MYO1BO43795 1136 aa14.01□□□□□ -0.17
DFFB-202ENST00000339350 CDC25AP30304 524 aa14.01□□□□□ -0.17
DFFB-202ENST00000339350 AKAP17AQ02040 695 aaKnown RBP14.01□□□□□ -0.17
DFFB-202ENST00000339350 PDCLQ13371 301 aa14.01□□□□□ -0.17
DFFB-202ENST00000339350 PDIA5Q14554 519 aa14.01□□□□□ -0.17
DFFB-202ENST00000339350 EARS2Q5JPH6 523 aaKnown RBP14.01□□□□□ -0.17
DFFB-202ENST00000339350 FCHSD1Q86WN1 690 aa14.01□□□□□ -0.17
DFFB-202ENST00000339350 FUKQ8N0W3 1084 aa14.01□□□□□ -0.17
DFFB-202ENST00000339350 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.01□□□□□ -0.17
DFFB-202ENST00000339350 TRMT112Q9UI30 125 aaKnown RBP14.01□□□□□ -0.17
DFFB-202ENST00000339350 TRPC6Q9Y210 931 aa14.01□□□□□ -0.17
DFFB-202ENST00000339350 OPLAHO14841 1288 aa14.01□□□□□ -0.17
DFFB-202ENST00000339350 STX10O60499 249 aa14.01□□□□□ -0.17
DFFB-202ENST00000339350 FMNL1O95466 1100 aaPredicted RBP14.01□□□□□ -0.17
DFFB-202ENST00000339350 SCNN1BP51168 640 aa14.01□□□□□ -0.17
DFFB-202ENST00000339350 MYO1EQ12965 1108 aa14.01□□□□□ -0.17
DFFB-202ENST00000339350 RTN1Q16799 776 aa14.01□□□□□ -0.17
DFFB-202ENST00000339350 CCDC178Q5BJE1 867 aa14.01□□□□□ -0.17
DFFB-202ENST00000339350 TRIM42Q8IWZ5 723 aa14.01□□□□□ -0.17
DFFB-202ENST00000339350 ZBTB38Q8NAP3 1195 aaPredicted RBP14.01□□□□□ -0.17
DFFB-202ENST00000339350 BICD1Q96G01 975 aa14.01□□□□□ -0.17
DFFB-202ENST00000339350 POLD4Q9HCU8 107 aa14.01□□□□□ -0.17
DFFB-202ENST00000339350 HAUS2Q9NVX0 235 aa14.01□□□□□ -0.17
DFFB-202ENST00000339350 VPS54Q9P1Q0 977 aa14.01□□□□□ -0.17
DFFB-202ENST00000339350 MYH8P13535 1937 aa14.01□□□□□ -0.17
DFFB-202ENST00000339350 LAMB4A4D0S4 1761 aa14□□□□□ -0.17
DFFB-202ENST00000339350 A0A1B0GVG6 124 aa14□□□□□ -0.17
DFFB-202ENST00000339350 GOLGA6L9A6NEM1 432 aa14□□□□□ -0.17
DFFB-202ENST00000339350 MINDY4BA8MYZ0 360 aa14□□□□□ -0.17
DFFB-202ENST00000339350 AGPSO00116 658 aa14□□□□□ -0.17
DFFB-202ENST00000339350 IRS4O14654 1257 aaPredicted RBP14□□□□□ -0.17
DFFB-202ENST00000339350 PCCAP05165 728 aaPredicted RBP14□□□□□ -0.17
DFFB-202ENST00000339350 ZNF18P17022 549 aa14□□□□□ -0.17
DFFB-202ENST00000339350 IFT88Q13099 833 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms