RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 DCDC2CA8MYV0 355 aa18.63■□□□□ 0.57
LINC01116-202ENST00000339037 DUSP11O75319 330 aaKnown RBP18.63■□□□□ 0.57
LINC01116-202ENST00000339037 TTLL1O95922 423 aa18.63■□□□□ 0.57
LINC01116-202ENST00000339037 FAAP100Q0VG06 881 aa18.63■□□□□ 0.57
LINC01116-202ENST00000339037 LRRC47Q8N1G4 583 aaKnown RBP18.63■□□□□ 0.57
LINC01116-202ENST00000339037 ANKRD35Q8N283 1001 aa18.63■□□□□ 0.57
LINC01116-202ENST00000339037 MAFAQ8NHW3 353 aaPredicted RBP18.63■□□□□ 0.57
LINC01116-202ENST00000339037 BBXQ8WY36 941 aaPredicted RBP18.63■□□□□ 0.57
LINC01116-202ENST00000339037 RNF25Q96BH1 459 aaPredicted RBP18.63■□□□□ 0.57
LINC01116-202ENST00000339037 RAVER2Q9HCJ3 691 aaKnown RBP18.63■□□□□ 0.57
LINC01116-202ENST00000339037 MTMR4Q9NYA4 1195 aa18.63■□□□□ 0.57
LINC01116-202ENST00000339037 FBXO40Q9UH90 709 aa18.63■□□□□ 0.57
LINC01116-202ENST00000339037 FEM1BQ9UK73 627 aa18.63■□□□□ 0.57
LINC01116-202ENST00000339037 M0R2C6 588 aa18.62■□□□□ 0.57
LINC01116-202ENST00000339037 OAZ1P54368 228 aa18.62■□□□□ 0.57
LINC01116-202ENST00000339037 ACVR2BQ13705 512 aa18.62■□□□□ 0.57
LINC01116-202ENST00000339037 KCNA10Q16322 511 aa18.62■□□□□ 0.57
LINC01116-202ENST00000339037 LRRFIP1Q32MZ4 808 aaKnown RBP18.62■□□□□ 0.57
LINC01116-202ENST00000339037 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.62■□□□□ 0.57
LINC01116-202ENST00000339037 GMCL1P1Q8NEA9 526 aa18.62■□□□□ 0.57
LINC01116-202ENST00000339037 KLHDC9Q8NEP7 349 aa18.62■□□□□ 0.57
LINC01116-202ENST00000339037 MYLIPQ8WY64 445 aa18.62■□□□□ 0.57
LINC01116-202ENST00000339037 MKL1Q969V6 931 aa18.62■□□□□ 0.57
LINC01116-202ENST00000339037 GLT1D1Q96MS3 346 aa18.62■□□□□ 0.57
LINC01116-202ENST00000339037 DCTPP1Q9H773 170 aa18.62■□□□□ 0.57
LINC01116-202ENST00000339037 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.62■□□□□ 0.57
LINC01116-202ENST00000339037 TMEM265A0A087WTH1 108 aa18.61■□□□□ 0.57
LINC01116-202ENST00000339037 C6orf222P0C671 652 aaPredicted RBP18.61■□□□□ 0.57
LINC01116-202ENST00000339037 CST5P28325 142 aaPredicted RBP18.61■□□□□ 0.57
LINC01116-202ENST00000339037 CCSAPQ6IQ19 270 aaPredicted RBP18.61■□□□□ 0.57
LINC01116-202ENST00000339037 CHST13Q8NET6 341 aa18.61■□□□□ 0.57
LINC01116-202ENST00000339037 NACAP1Q9BZK3 213 aa18.61■□□□□ 0.57
LINC01116-202ENST00000339037 ABHD16BQ9H3Z7 469 aa18.61■□□□□ 0.57
LINC01116-202ENST00000339037 SPC25Q9HBM1 224 aa18.61■□□□□ 0.57
LINC01116-202ENST00000339037 PLIN4Q96Q06 1357 aa18.6■□□□□ 0.57
LINC01116-202ENST00000339037 ELP1O95163 1332 aa18.6■□□□□ 0.57
LINC01116-202ENST00000339037 MROH7Q68CQ1 1323 aa18.6■□□□□ 0.57
LINC01116-202ENST00000339037 MYADML2A6NDP7 307 aa18.6■□□□□ 0.57
LINC01116-202ENST00000339037 PATL2C9JE40 543 aaKnown RBP18.6■□□□□ 0.57
LINC01116-202ENST00000339037 TSPY3P0CV98 308 aa18.6■□□□□ 0.57
LINC01116-202ENST00000339037 TSPY8P0CW00 308 aa18.6■□□□□ 0.57
LINC01116-202ENST00000339037 FOSL2P15408 326 aa18.6■□□□□ 0.57
LINC01116-202ENST00000339037 PDE4BQ07343 736 aa18.6■□□□□ 0.57
LINC01116-202ENST00000339037 CCDC144BQ3MJ40 725 aa18.6■□□□□ 0.57
LINC01116-202ENST00000339037 ARMCX2Q7L311 632 aa18.6■□□□□ 0.57
LINC01116-202ENST00000339037 IFNL3Q8IZI9 196 aa18.6■□□□□ 0.57
LINC01116-202ENST00000339037 PCSK9Q8NBP7 692 aaKnown RBP18.6■□□□□ 0.57
LINC01116-202ENST00000339037 FGD4Q96M96 766 aa18.6■□□□□ 0.57
LINC01116-202ENST00000339037 HOMER2Q9NSB8 354 aa18.6■□□□□ 0.57
LINC01116-202ENST00000339037 TBX21Q9UL17 535 aa18.6■□□□□ 0.57
LINC01116-202ENST00000339037 ISY1Q9ULR0 285 aaKnown RBP18.6■□□□□ 0.57
LINC01116-202ENST00000339037 ADCY6O43306 1168 aa18.59■□□□□ 0.57
LINC01116-202ENST00000339037 BMP3P12645 472 aa18.59■□□□□ 0.57
LINC01116-202ENST00000339037 SLFN13Q68D06 897 aa18.59■□□□□ 0.57
LINC01116-202ENST00000339037 NEDD1Q8NHV4 660 aa18.59■□□□□ 0.57
LINC01116-202ENST00000339037 CHD7Q9P2D1 2997 aa18.59■□□□□ 0.57
LINC01116-202ENST00000339037 MYH4Q9Y623 1939 aa18.59■□□□□ 0.57
LINC01116-202ENST00000339037 TIMP1P01033 207 aa18.58■□□□□ 0.56
LINC01116-202ENST00000339037 ASGR1P07306 291 aa18.58■□□□□ 0.56
LINC01116-202ENST00000339037 SLC3A2P08195 630 aaKnown RBP18.58■□□□□ 0.56
LINC01116-202ENST00000339037 FDX1P10109 184 aa18.58■□□□□ 0.56
LINC01116-202ENST00000339037 STAT2P52630 851 aa18.58■□□□□ 0.56
LINC01116-202ENST00000339037 IRX5P78411 483 aaPredicted RBP18.58■□□□□ 0.56
LINC01116-202ENST00000339037 GNASQ5JWF2 1037 aa18.58■□□□□ 0.56
LINC01116-202ENST00000339037 CCDC144CPQ8IYA2 1237 aa18.58■□□□□ 0.56
LINC01116-202ENST00000339037 VTI1AQ96AJ9 217 aa18.58■□□□□ 0.56
LINC01116-202ENST00000339037 NAPBQ9H115 298 aa18.58■□□□□ 0.56
LINC01116-202ENST00000339037 UPF3AQ9H1J1 476 aaKnown RBP18.58■□□□□ 0.56
LINC01116-202ENST00000339037 TTC41PQ6P2S7 1318 aa18.57■□□□□ 0.56
LINC01116-202ENST00000339037 TMEM232C9JQI7 657 aa18.57■□□□□ 0.56
LINC01116-202ENST00000339037 ERC2O15083 957 aa18.57■□□□□ 0.56
LINC01116-202ENST00000339037 DNAJB2P25686 324 aa18.57■□□□□ 0.56
LINC01116-202ENST00000339037 GJA9P57773 515 aa18.57■□□□□ 0.56
LINC01116-202ENST00000339037 IKQ13123 557 aaPredicted RBP18.57■□□□□ 0.56
LINC01116-202ENST00000339037 MFSD5Q6N075 450 aa18.57■□□□□ 0.56
LINC01116-202ENST00000339037 GMCL1Q96IK5 515 aa18.57■□□□□ 0.56
LINC01116-202ENST00000339037 SEC62Q99442 399 aaKnown RBP18.57■□□□□ 0.56
LINC01116-202ENST00000339037 ACAD9Q9H845 621 aa18.57■□□□□ 0.56
LINC01116-202ENST00000339037 A0A0U1RQG5 324 aaPredicted RBP18.56■□□□□ 0.56
LINC01116-202ENST00000339037 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.56■□□□□ 0.56
LINC01116-202ENST00000339037 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.56■□□□□ 0.56
LINC01116-202ENST00000339037 SLC1A4P43007 532 aa18.56■□□□□ 0.56
LINC01116-202ENST00000339037 CDK7P50613 346 aa18.56■□□□□ 0.56
LINC01116-202ENST00000339037 TFAP4Q01664 338 aa18.56■□□□□ 0.56
LINC01116-202ENST00000339037 CNTN2Q02246 1040 aa18.56■□□□□ 0.56
LINC01116-202ENST00000339037 PPARAQ07869 468 aa18.56■□□□□ 0.56
LINC01116-202ENST00000339037 CCDC174Q6PII3 467 aa18.56■□□□□ 0.56
LINC01116-202ENST00000339037 FSD1Q9BTV5 496 aa18.56■□□□□ 0.56
LINC01116-202ENST00000339037 ARVCFO00192 962 aa18.55■□□□□ 0.56
LINC01116-202ENST00000339037 PPIGQ13427 754 aaKnown RBP eCLIP18.55■□□□□ 0.56
LINC01116-202ENST00000339037 PPP4R3BQ5MIZ7 849 aa18.55■□□□□ 0.56
LINC01116-202ENST00000339037 FAM160B2Q86V87 743 aa18.55■□□□□ 0.56
LINC01116-202ENST00000339037 FAM133AQ8N9E0 248 aa18.55■□□□□ 0.56
LINC01116-202ENST00000339037 PI4K2BQ8TCG2 481 aa18.55■□□□□ 0.56
LINC01116-202ENST00000339037 CHURC1Q8WUH1 139 aa18.55■□□□□ 0.56
LINC01116-202ENST00000339037 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.55■□□□□ 0.56
LINC01116-202ENST00000339037 KATNBL1Q9H079 304 aa18.55■□□□□ 0.56
LINC01116-202ENST00000339037 A1CFQ9NQ94 594 aaKnown RBP18.55■□□□□ 0.56
LINC01116-202ENST00000339037 RNF146Q9NTX7 359 aa18.55■□□□□ 0.56
LINC01116-202ENST00000339037 STX8Q9UNK0 236 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms