RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 PHLPP2Q6ZVD8 1323 aa15.14■□□□□ 0.01
RTN4-202ENST00000337526 PLA2R1Q13018 1463 aa15.14■□□□□ 0.01
RTN4-202ENST00000337526 CD19P15391 556 aa15.14■□□□□ 0.01
RTN4-202ENST00000337526 EEF1GP26641 437 aaKnown RBP15.14■□□□□ 0.01
RTN4-202ENST00000337526 FNBP4Q8N3X1 1017 aaPredicted RBP15.14■□□□□ 0.01
RTN4-202ENST00000337526 SAMSN1Q9NSI8 373 aaKnown RBP15.14■□□□□ 0.01
RTN4-202ENST00000337526 PRR36Q9H6K5 1346 aa15.14■□□□□ 0.01
RTN4-202ENST00000337526 BUB1BO60566 1050 aaPredicted RBP15.14■□□□□ 0.01
RTN4-202ENST00000337526 ATP1A3P13637 1013 aa15.14■□□□□ 0.01
RTN4-202ENST00000337526 EHHADHQ08426 723 aa15.14■□□□□ 0.01
RTN4-202ENST00000337526 AIFM3Q96NN9 605 aa15.14■□□□□ 0.01
RTN4-202ENST00000337526 ATG3Q9NT62 314 aa15.14■□□□□ 0.01
RTN4-202ENST00000337526 ZSWIM5Q9P217 1185 aa15.14■□□□□ 0.01
RTN4-202ENST00000337526 MAN1B1Q9UKM7 699 aa15.14■□□□□ 0.01
RTN4-202ENST00000337526 FRMPD2Q68DX3 1309 aaPredicted RBP15.14■□□□□ 0.01
RTN4-202ENST00000337526 MMP1P03956 469 aa15.14■□□□□ 0.01
RTN4-202ENST00000337526 HSPA1LP34931 641 aa15.13■□□□□ 0.01
RTN4-202ENST00000337526 ZNF131P52739 623 aa15.13■□□□□ 0.01
RTN4-202ENST00000337526 GUCY2DQ02846 1103 aa15.13■□□□□ 0.01
RTN4-202ENST00000337526 LRRC47Q8N1G4 583 aaKnown RBP15.13■□□□□ 0.01
RTN4-202ENST00000337526 GOLGA5Q8TBA6 731 aa15.13■□□□□ 0.01
RTN4-202ENST00000337526 MCUR1Q96AQ8 359 aa15.13■□□□□ 0.01
RTN4-202ENST00000337526 ASAP1Q9ULH1 1129 aa15.13■□□□□ 0.01
RTN4-202ENST00000337526 USP6P35125 1406 aa15.13■□□□□ 0.01
RTN4-202ENST00000337526 CCDC151A5D8V7 595 aa15.13■□□□□ 0.01
RTN4-202ENST00000337526 FAM98CQ17RN3 349 aaKnown RBP15.13■□□□□ 0.01
RTN4-202ENST00000337526 MAIP1Q8WWC4 291 aa15.13■□□□□ 0.01
RTN4-202ENST00000337526 DPH5Q9H2P9 285 aa15.13■□□□□ 0.01
RTN4-202ENST00000337526 METTL14Q9HCE5 456 aaKnown RBP15.13■□□□□ 0.01
RTN4-202ENST00000337526 HOMER3Q9NSC5 361 aa15.13■□□□□ 0.01
RTN4-202ENST00000337526 CAPN7Q9Y6W3 813 aa15.13■□□□□ 0.01
RTN4-202ENST00000337526 VSTM4Q8IW00 320 aa15.13■□□□□ 0.01
RTN4-202ENST00000337526 CACNA2D3Q8IZS8 1091 aa15.13■□□□□ 0.01
RTN4-202ENST00000337526 ARHGEF2Q92974 986 aaKnown RBP15.13■□□□□ 0.01
RTN4-202ENST00000337526 PPP1R12CQ9BZL4 782 aa15.13■□□□□ 0.01
RTN4-202ENST00000337526 PRDM15P57071 1507 aaPredicted RBP15.13■□□□□ 0.01
RTN4-202ENST00000337526 RNF40O75150 1001 aa15.13■□□□□ 0.01
RTN4-202ENST00000337526 CIB2O75838 187 aa15.13■□□□□ 0.01
RTN4-202ENST00000337526 RASSF7Q02833 373 aa15.13■□□□□ 0.01
RTN4-202ENST00000337526 RAB3IL1Q8TBN0 382 aa15.13■□□□□ 0.01
RTN4-202ENST00000337526 MGARPQ8TDB4 240 aa15.13■□□□□ 0.01
RTN4-202ENST00000337526 RASGRP4Q8TDF6 673 aa15.13■□□□□ 0.01
RTN4-202ENST00000337526 IWS1Q96ST2 819 aa15.13■□□□□ 0.01
RTN4-202ENST00000337526 GPHNQ9NQX3 736 aaPredicted RBP15.13■□□□□ 0.01
RTN4-202ENST00000337526 CDC25AP30304 524 aa15.12■□□□□ 0.01
RTN4-202ENST00000337526 ANKRD42Q8N9B4 389 aa15.12■□□□□ 0.01
RTN4-202ENST00000337526 CUEDC2Q9H467 287 aa15.12■□□□□ 0.01
RTN4-202ENST00000337526 MAGEF1Q9HAY2 307 aa15.12■□□□□ 0.01
RTN4-202ENST00000337526 SH2B2O14492 632 aaPredicted RBP15.12■□□□□ 0.01
RTN4-202ENST00000337526 TNNI1P19237 187 aa15.12■□□□□ 0.01
RTN4-202ENST00000337526 STX2P32856 288 aa15.12■□□□□ 0.01
RTN4-202ENST00000337526 FAM178BQ8IXR5 827 aa15.12■□□□□ 0.01
RTN4-202ENST00000337526 PLCD3Q8N3E9 789 aa15.12■□□□□ 0.01
RTN4-202ENST00000337526 DHTKD1Q96HY7 919 aaPredicted RBP15.12■□□□□ 0.01
RTN4-202ENST00000337526 DDX25Q9UHL0 483 aaKnown RBP15.12■□□□□ 0.01
RTN4-202ENST00000337526 CLNS1AP54105 237 aaKnown RBP15.12■□□□□ 0.01
RTN4-202ENST00000337526 TEKT1Q969V4 418 aa15.12■□□□□ 0.01
RTN4-202ENST00000337526 COL4A3BPQ9Y5P4 624 aa15.12■□□□□ 0.01
RTN4-202ENST00000337526 PRKAB2O43741 272 aa15.12■□□□□ 0.01
RTN4-202ENST00000337526 IFNB1P01574 187 aa15.12■□□□□ 0.01
RTN4-202ENST00000337526 DMTNQ08495 405 aa15.12■□□□□ 0.01
RTN4-202ENST00000337526 RASA3Q14644 834 aa15.12■□□□□ 0.01
RTN4-202ENST00000337526 ADAT2Q7Z6V5 191 aaKnown RBP15.12■□□□□ 0.01
RTN4-202ENST00000337526 LMNTD2Q8IXW0 634 aa15.12■□□□□ 0.01
RTN4-202ENST00000337526 RETREG2Q8NC44 543 aa15.12■□□□□ 0.01
RTN4-202ENST00000337526 LARSQ9P2J5 1176 aaKnown RBP15.12■□□□□ 0.01
RTN4-202ENST00000337526 ZBTB1Q9Y2K1 713 aa15.12■□□□□ 0.01
RTN4-202ENST00000337526 TBC1D8O95759 1140 aa15.11■□□□□ 0.01
RTN4-202ENST00000337526 LIFRP42702 1097 aa15.11■□□□□ 0.01
RTN4-202ENST00000337526 LIG3P49916 1009 aa15.11■□□□□ 0.01
RTN4-202ENST00000337526 ARID5BQ14865 1188 aa15.11■□□□□ 0.01
RTN4-202ENST00000337526 ANAPC4Q9UJX5 808 aa15.11■□□□□ 0.01
RTN4-202ENST00000337526 ZMYND10O75800 440 aa15.11■□□□□ 0.01
RTN4-202ENST00000337526 GKAP1Q5VSY0 366 aaPredicted RBP15.11■□□□□ 0.01
RTN4-202ENST00000337526 KCTD16Q68DU8 428 aa15.11■□□□□ 0.01
RTN4-202ENST00000337526 PAXIP1Q6ZW49 1069 aaPredicted RBP15.11■□□□□ 0.01
RTN4-202ENST00000337526 CHURC1Q8WUH1 139 aa15.11■□□□□ 0.01
RTN4-202ENST00000337526 CPSF1Q10570 1443 aaKnown RBP15.11■□□□□ 0.01
RTN4-202ENST00000337526 EXOC3L4Q17RC7 722 aa15.11■□□□□ 0.01
RTN4-202ENST00000337526 ANKRD20A3Q5VUR7 823 aa15.11■□□□□ 0.01
RTN4-202ENST00000337526 MCTP2Q6DN12 878 aa15.11■□□□□ 0.01
RTN4-202ENST00000337526 SLFN12Q8IYM2 578 aa15.11■□□□□ 0.01
RTN4-202ENST00000337526 P2RX5Q93086 422 aa15.11■□□□□ 0.01
RTN4-202ENST00000337526 GJA10Q969M2 543 aa15.11■□□□□ 0.01
RTN4-202ENST00000337526 PARD6BQ9BYG5 372 aa15.11■□□□□ 0.01
RTN4-202ENST00000337526 LAD1O00515 517 aa15.11■□□□□ 0.01
RTN4-202ENST00000337526 VPS41P49754 854 aa15.11■□□□□ 0.01
RTN4-202ENST00000337526 SLC8A3P57103 927 aa15.11■□□□□ 0.01
RTN4-202ENST00000337526 ACRBPQ8NEB7 543 aa15.11■□□□□ 0.01
RTN4-202ENST00000337526 LARP4BQ92615 738 aaKnown RBP15.11■□□□□ 0.01
RTN4-202ENST00000337526 VPS37BQ9H9H4 285 aa15.11■□□□□ 0.01
RTN4-202ENST00000337526 PICK1Q9NRD5 415 aa15.11■□□□□ 0.01
RTN4-202ENST00000337526 SRPRBQ9Y5M8 271 aaKnown RBP15.11■□□□□ 0.01
RTN4-202ENST00000337526 SOWAHDA6NJG2 315 aa15.1■□□□□ 0.01
RTN4-202ENST00000337526 CLCN6P51797 869 aa15.1■□□□□ 0.01
RTN4-202ENST00000337526 GINS2Q9Y248 185 aa15.1■□□□□ 0.01
RTN4-202ENST00000337526 PCDHB6Q9Y5E3 794 aa15.1■□□□□ 0.01
RTN4-202ENST00000337526 CYP4A11Q02928 519 aa15.1■□□□□ 0.01
RTN4-202ENST00000337526 LGSNQ5TDP6 509 aa15.1■□□□□ 0.01
RTN4-202ENST00000337526 CCDC62Q6P9F0 684 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms