RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 RINT1Q6NUQ1 792 aa14.32□□□□□ -0.12
HLCS-201ENST00000336648 PHKBQ93100 1093 aa14.32□□□□□ -0.12
HLCS-201ENST00000336648 SUCLG2Q96I99 432 aa14.32□□□□□ -0.12
HLCS-201ENST00000336648 ADPGKQ9BRR6 497 aa14.32□□□□□ -0.12
HLCS-201ENST00000336648 PRDM1O75626 825 aa14.32□□□□□ -0.12
HLCS-201ENST00000336648 SPATA1Q5VX52 437 aa14.32□□□□□ -0.12
HLCS-201ENST00000336648 ANKRD42Q8N9B4 389 aa14.32□□□□□ -0.12
HLCS-201ENST00000336648 CAPS2Q9BXY5 557 aa14.32□□□□□ -0.12
HLCS-201ENST00000336648 FOSP01100 380 aaPredicted RBP14.31□□□□□ -0.12
HLCS-201ENST00000336648 ETF1P62495 437 aaKnown RBP14.31□□□□□ -0.12
HLCS-201ENST00000336648 ASPHQ12797 758 aa14.31□□□□□ -0.12
HLCS-201ENST00000336648 NLRC4Q9NPP4 1024 aa14.31□□□□□ -0.12
HLCS-201ENST00000336648 SHANK2Q9UPX8 1470 aa14.31□□□□□ -0.12
HLCS-201ENST00000336648 SEC24BO95487 1268 aa14.31□□□□□ -0.12
HLCS-201ENST00000336648 OR52Z1P0C646 297 aa14.31□□□□□ -0.12
HLCS-201ENST00000336648 ATF2P15336 505 aa14.31□□□□□ -0.12
HLCS-201ENST00000336648 LMNB1P20700 586 aa14.31□□□□□ -0.12
HLCS-201ENST00000336648 ANKRD20A4Q4UJ75 823 aa14.31□□□□□ -0.12
HLCS-201ENST00000336648 ANKRD20A8PQ5CZ79 823 aa14.31□□□□□ -0.12
HLCS-201ENST00000336648 ANKRD20A2Q5SQ80 823 aa14.31□□□□□ -0.12
HLCS-201ENST00000336648 ANKRD20A1Q5TYW2 823 aa14.31□□□□□ -0.12
HLCS-201ENST00000336648 TPH2Q8IWU9 490 aa14.31□□□□□ -0.12
HLCS-201ENST00000336648 PPP2R2CQ9Y2T4 447 aa14.31□□□□□ -0.12
HLCS-201ENST00000336648 DDX39AO00148 427 aaKnown RBP14.31□□□□□ -0.12
HLCS-201ENST00000336648 ZNF500O60304 480 aaPredicted RBP14.31□□□□□ -0.12
HLCS-201ENST00000336648 SYF2O95926 243 aaKnown RBP14.31□□□□□ -0.12
HLCS-201ENST00000336648 LIG4P49917 911 aa14.31□□□□□ -0.12
HLCS-201ENST00000336648 ZSCAN10Q96SZ4 725 aaPredicted RBP14.31□□□□□ -0.12
HLCS-201ENST00000336648 CCDC68Q9H2F9 335 aa14.31□□□□□ -0.12
HLCS-201ENST00000336648 TBC1D7Q9P0N9 293 aa14.31□□□□□ -0.12
HLCS-201ENST00000336648 COL17A1Q9UMD9 1497 aaPredicted RBP14.31□□□□□ -0.12
HLCS-201ENST00000336648 PALM3A6NDB9 673 aaPredicted RBP14.31□□□□□ -0.12
HLCS-201ENST00000336648 OTUD7BQ6GQQ9 843 aa14.31□□□□□ -0.12
HLCS-201ENST00000336648 KLHDC4Q8TBB5 520 aa14.31□□□□□ -0.12
HLCS-201ENST00000336648 KCNJ14Q9UNX9 436 aa14.31□□□□□ -0.12
HLCS-201ENST00000336648 JAG2Q9Y219 1238 aa14.31□□□□□ -0.12
HLCS-201ENST00000336648 GJA3Q9Y6H8 435 aa14.31□□□□□ -0.12
HLCS-201ENST00000336648 NEK8Q86SG6 692 aa14.31□□□□□ -0.12
HLCS-201ENST00000336648 LARGE2Q8N3Y3 721 aa14.31□□□□□ -0.12
HLCS-201ENST00000336648 ERBB4Q15303 1308 aa14.31□□□□□ -0.12
HLCS-201ENST00000336648 HSPA8P11142 646 aaKnown RBP14.3□□□□□ -0.12
HLCS-201ENST00000336648 CDC25BP30305 580 aa14.3□□□□□ -0.12
HLCS-201ENST00000336648 PABPC4Q13310 644 aaKnown RBP eCLIP14.3□□□□□ -0.12
HLCS-201ENST00000336648 PNOCQ13519 176 aa14.3□□□□□ -0.12
HLCS-201ENST00000336648 DRC3Q9H069 523 aa14.3□□□□□ -0.12
HLCS-201ENST00000336648 WDR70Q9NW82 654 aa14.3□□□□□ -0.12
HLCS-201ENST00000336648 OATP04181 439 aa14.3□□□□□ -0.12
HLCS-201ENST00000336648 VPS54Q9P1Q0 977 aa14.3□□□□□ -0.12
HLCS-201ENST00000336648 ZAP70P43403 619 aa14.3□□□□□ -0.12
HLCS-201ENST00000336648 GRM1Q13255 1194 aa14.3□□□□□ -0.12
HLCS-201ENST00000336648 NLRP7Q8WX94 980 aa14.3□□□□□ -0.12
HLCS-201ENST00000336648 BLZF1Q9H2G9 400 aa14.3□□□□□ -0.12
HLCS-201ENST00000336648 TRAPPC10P48553 1259 aa14.3□□□□□ -0.12
HLCS-201ENST00000336648 DLGAP5Q15398 846 aa14.3□□□□□ -0.12
HLCS-201ENST00000336648 MAEAQ7L5Y9 396 aa14.3□□□□□ -0.12
HLCS-201ENST00000336648 RETREG2Q8NC44 543 aa14.3□□□□□ -0.12
HLCS-201ENST00000336648 SPDL1Q96EA4 605 aa14.3□□□□□ -0.12
HLCS-201ENST00000336648 SCINQ9Y6U3 715 aa14.3□□□□□ -0.12
HLCS-201ENST00000336648 USP19O94966 1318 aa14.3□□□□□ -0.12
HLCS-201ENST00000336648 A0A1W2PQ27 194 aa14.29□□□□□ -0.12
HLCS-201ENST00000336648 A0A1W2PQ64 194 aa14.29□□□□□ -0.12
HLCS-201ENST00000336648 A0A1W2PQD8 194 aa14.29□□□□□ -0.12
HLCS-201ENST00000336648 POLR2MP0CAP2 368 aa14.29□□□□□ -0.12
HLCS-201ENST00000336648 TMED1Q13445 227 aa14.29□□□□□ -0.12
HLCS-201ENST00000336648 PRPSAP1Q14558 356 aa14.29□□□□□ -0.12
HLCS-201ENST00000336648 TTC4O95801 387 aa14.29□□□□□ -0.12
HLCS-201ENST00000336648 RAD51AP2Q09MP3 1159 aa14.29□□□□□ -0.12
HLCS-201ENST00000336648 LONRF3Q496Y0 759 aa14.29□□□□□ -0.12
HLCS-201ENST00000336648 ARMC9Q7Z3E5 817 aa14.29□□□□□ -0.12
HLCS-201ENST00000336648 TRIM56Q9BRZ2 755 aaKnown RBP14.29□□□□□ -0.12
HLCS-201ENST00000336648 TUBB6Q9BUF5 446 aa14.29□□□□□ -0.12
HLCS-201ENST00000336648 TEKT3Q9BXF9 490 aa14.29□□□□□ -0.12
HLCS-201ENST00000336648 PANK4Q9NVE7 773 aa14.29□□□□□ -0.12
HLCS-201ENST00000336648 FAM8A1Q9UBU6 413 aa14.29□□□□□ -0.12
HLCS-201ENST00000336648 PCDHA12Q9UN75 941 aa14.29□□□□□ -0.12
HLCS-201ENST00000336648 EIF4G3O43432 1585 aaKnown RBP14.29□□□□□ -0.12
HLCS-201ENST00000336648 XPOTO43592 962 aaKnown RBP14.29□□□□□ -0.12
HLCS-201ENST00000336648 SUN1O94901 812 aa14.29□□□□□ -0.12
HLCS-201ENST00000336648 IFNB1P01574 187 aa14.29□□□□□ -0.12
HLCS-201ENST00000336648 BFSP1Q12934 665 aa14.29□□□□□ -0.12
HLCS-201ENST00000336648 USH1GQ495M9 461 aa14.29□□□□□ -0.12
HLCS-201ENST00000336648 GLG1Q92896 1179 aa14.29□□□□□ -0.12
HLCS-201ENST00000336648 PSTPIP2Q9H939 334 aa14.29□□□□□ -0.12
HLCS-201ENST00000336648 RNF14Q9UBS8 474 aa14.29□□□□□ -0.12
HLCS-201ENST00000336648 STK17AQ9UEE5 414 aa14.29□□□□□ -0.12
HLCS-201ENST00000336648 ERVV-2B6SEH9 535 aa14.29□□□□□ -0.12
HLCS-201ENST00000336648 CAPN9O14815 690 aa14.29□□□□□ -0.12
HLCS-201ENST00000336648 SESN3P58005 492 aa14.29□□□□□ -0.12
HLCS-201ENST00000336648 TRMT44Q8IYL2 757 aaKnown RBP14.29□□□□□ -0.12
HLCS-201ENST00000336648 CFAP61Q8NHU2 1237 aa14.29□□□□□ -0.12
HLCS-201ENST00000336648 LRRC8CQ8TDW0 803 aa14.29□□□□□ -0.12
HLCS-201ENST00000336648 PSMB7Q99436 277 aa14.29□□□□□ -0.12
HLCS-201ENST00000336648 GINS2Q9Y248 185 aa14.29□□□□□ -0.12
HLCS-201ENST00000336648 FRMD3A2A2Y4 597 aa14.29□□□□□ -0.12
HLCS-201ENST00000336648 IL9RQ01113 521 aa14.29□□□□□ -0.12
HLCS-201ENST00000336648 CDR2Q01850 454 aa14.29□□□□□ -0.12
HLCS-201ENST00000336648 RABGGTAQ92696 567 aa14.29□□□□□ -0.12
HLCS-201ENST00000336648 CARD14Q9BXL6 1004 aa14.29□□□□□ -0.12
HLCS-201ENST00000336648 GADD45BO75293 160 aaPredicted RBP14.28□□□□□ -0.12
HLCS-201ENST00000336648 DCAF15Q66K64 600 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms