RNA–Protein interactions for RNA: ENST00000335643.12

KATNA1-201, Transcript of katanin catalytic subunit A1, humanhuman

TSL 1 (best) BASIC

Gene KATNA1, Length 1,564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KATNA1-201ENST00000335643 ANKS1AQ92625 1134 aa17.53■□□□□ 0.4
KATNA1-201ENST00000335643 FGD4Q96M96 766 aa17.53■□□□□ 0.4
KATNA1-201ENST00000335643 CNNM2Q9H8M5 875 aa17.53■□□□□ 0.4
KATNA1-201ENST00000335643 OGDHLQ9ULD0 1010 aa17.53■□□□□ 0.4
KATNA1-201ENST00000335643 CTDP1Q9Y5B0 961 aaPredicted RBP17.53■□□□□ 0.4
KATNA1-201ENST00000335643 DNAJC25-GNG10A0A024R161 153 aa17.53■□□□□ 0.4
KATNA1-201ENST00000335643 E7EWF7 191 aa17.53■□□□□ 0.4
KATNA1-201ENST00000335643 COPB2P35606 906 aa17.53■□□□□ 0.4
KATNA1-201ENST00000335643 SEC23AQ15436 765 aa17.53■□□□□ 0.4
KATNA1-201ENST00000335643 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.53■□□□□ 0.4
KATNA1-201ENST00000335643 RANBP17Q9H2T7 1088 aaKnown RBP17.53■□□□□ 0.4
KATNA1-201ENST00000335643 SENP2Q9HC62 589 aa17.53■□□□□ 0.4
KATNA1-201ENST00000335643 FDX1P10109 184 aa17.52■□□□□ 0.39
KATNA1-201ENST00000335643 MUM1L1Q5H9M0 696 aa17.52■□□□□ 0.39
KATNA1-201ENST00000335643 SYDE2Q5VT97 1194 aa17.52■□□□□ 0.39
KATNA1-201ENST00000335643 PAWRQ96IZ0 340 aaKnown RBP17.52■□□□□ 0.39
KATNA1-201ENST00000335643 MCM3APO60318 1980 aa17.52■□□□□ 0.39
KATNA1-201ENST00000335643 CNGA1P29973 690 aa17.51■□□□□ 0.39
KATNA1-201ENST00000335643 NT5C2P49902 561 aa17.51■□□□□ 0.39
KATNA1-201ENST00000335643 ANO1Q5XXA6 986 aa17.51■□□□□ 0.39
KATNA1-201ENST00000335643 CHST3Q7LGC8 479 aa17.51■□□□□ 0.39
KATNA1-201ENST00000335643 CHST13Q8NET6 341 aa17.51■□□□□ 0.39
KATNA1-201ENST00000335643 UBA5Q9GZZ9 404 aa17.51■□□□□ 0.39
KATNA1-201ENST00000335643 KAT14Q9H8E8 782 aa17.51■□□□□ 0.39
KATNA1-201ENST00000335643 RNF146Q9NTX7 359 aa17.51■□□□□ 0.39
KATNA1-201ENST00000335643 NEFLP07196 543 aa17.5■□□□□ 0.39
KATNA1-201ENST00000335643 ALAS1P13196 640 aa17.5■□□□□ 0.39
KATNA1-201ENST00000335643 ANTXR2P58335 489 aa17.5■□□□□ 0.39
KATNA1-201ENST00000335643 TINF2Q9BSI4 451 aa17.5■□□□□ 0.39
KATNA1-201ENST00000335643 UBAC1Q9BSL1 405 aa17.5■□□□□ 0.39
KATNA1-201ENST00000335643 A1CFQ9NQ94 594 aaKnown RBP17.5■□□□□ 0.39
KATNA1-201ENST00000335643 SLC5A4Q9NY91 659 aa17.5■□□□□ 0.39
KATNA1-201ENST00000335643 DDX20Q9UHI6 824 aaKnown RBP17.5■□□□□ 0.39
KATNA1-201ENST00000335643 DIS3Q9Y2L1 958 aaKnown RBP17.5■□□□□ 0.39
KATNA1-201ENST00000335643 ASTN1O14525 1302 aa17.5■□□□□ 0.39
KATNA1-201ENST00000335643 ICAM1P05362 532 aa17.49■□□□□ 0.39
KATNA1-201ENST00000335643 CNTN2Q02246 1040 aa17.49■□□□□ 0.39
KATNA1-201ENST00000335643 MB21D2Q8IYB1 491 aaPredicted RBP17.49■□□□□ 0.39
KATNA1-201ENST00000335643 ANKRD35Q8N283 1001 aa17.49■□□□□ 0.39
KATNA1-201ENST00000335643 DDX11Q96FC9 970 aa17.49■□□□□ 0.39
KATNA1-201ENST00000335643 TRERF1Q96PN7 1200 aa17.49■□□□□ 0.39
KATNA1-201ENST00000335643 ACAD9Q9H845 621 aa17.49■□□□□ 0.39
KATNA1-201ENST00000335643 ANO2Q9NQ90 1003 aa17.49■□□□□ 0.39
KATNA1-201ENST00000335643 DDX49Q9Y6V7 483 aaKnown RBP17.49■□□□□ 0.39
KATNA1-201ENST00000335643 CCDC178Q5BJE1 867 aa17.49■□□□□ 0.39
KATNA1-201ENST00000335643 IFIT1BQ5T764 474 aaKnown RBP17.49■□□□□ 0.39
KATNA1-201ENST00000335643 PRPF38BQ5VTL8 546 aaKnown RBP17.49■□□□□ 0.39
KATNA1-201ENST00000335643 ANKLE1Q8NAG6 615 aa17.49■□□□□ 0.39
KATNA1-201ENST00000335643 FBXO40Q9UH90 709 aa17.49■□□□□ 0.39
KATNA1-201ENST00000335643 CCPG1Q9ULG6 757 aa17.49■□□□□ 0.39
KATNA1-201ENST00000335643 LRRC37A2A6NM11 1700 aa17.48■□□□□ 0.39
KATNA1-201ENST00000335643 PFASO15067 1338 aa17.48■□□□□ 0.39
KATNA1-201ENST00000335643 SLC27A2O14975 620 aa17.48■□□□□ 0.39
KATNA1-201ENST00000335643 SNAI1O95863 264 aaPredicted RBP17.48■□□□□ 0.39
KATNA1-201ENST00000335643 TRDNQ13061 729 aa17.48■□□□□ 0.39
KATNA1-201ENST00000335643 NECTIN1Q15223 517 aa17.48■□□□□ 0.39
KATNA1-201ENST00000335643 STAG2Q8N3U4 1231 aa17.48■□□□□ 0.39
KATNA1-201ENST00000335643 NCOA7Q8NI08 942 aa17.48■□□□□ 0.39
KATNA1-201ENST00000335643 PURBQ96QR8 312 aaKnown RBP17.48■□□□□ 0.39
KATNA1-201ENST00000335643 GPHNQ9NQX3 736 aaPredicted RBP17.48■□□□□ 0.39
KATNA1-201ENST00000335643 CEP290O15078 2479 aa17.47■□□□□ 0.39
KATNA1-201ENST00000335643 NFIBO00712 420 aa17.47■□□□□ 0.39
KATNA1-201ENST00000335643 SEPT4O43236 478 aa17.47■□□□□ 0.39
KATNA1-201ENST00000335643 ZNF865P0CJ78 1059 aaPredicted RBP17.47■□□□□ 0.39
KATNA1-201ENST00000335643 GPATCH4Q5T3I0 446 aaKnown RBP17.47■□□□□ 0.39
KATNA1-201ENST00000335643 CREB3L3Q68CJ9 461 aa17.47■□□□□ 0.39
KATNA1-201ENST00000335643 MAMDC4Q6UXC1 1216 aa17.47■□□□□ 0.39
KATNA1-201ENST00000335643 KIAA1211Q6ZU35 1233 aa17.47■□□□□ 0.39
KATNA1-201ENST00000335643 FAM133AQ8N9E0 248 aa17.47■□□□□ 0.39
KATNA1-201ENST00000335643 LENG1Q96BZ8 264 aaPredicted RBP17.47■□□□□ 0.39
KATNA1-201ENST00000335643 LAMA3Q16787 3333 aa17.46■□□□□ 0.39
KATNA1-201ENST00000335643 MYH6P13533 1939 aa17.46■□□□□ 0.39
KATNA1-201ENST00000335643 SOWAHBA6NEL2 793 aa17.46■□□□□ 0.39
KATNA1-201ENST00000335643 CDC45O75419 566 aa17.46■□□□□ 0.39
KATNA1-201ENST00000335643 COL6A1P12109 1028 aa17.46■□□□□ 0.39
KATNA1-201ENST00000335643 TKFCQ3LXA3 575 aa17.46■□□□□ 0.39
KATNA1-201ENST00000335643 NECAB2Q7Z6G3 386 aa17.46■□□□□ 0.39
KATNA1-201ENST00000335643 RALYLQ86SE5 291 aaKnown RBP17.46■□□□□ 0.39
KATNA1-201ENST00000335643 CYP39A1Q9NYL5 469 aa17.46■□□□□ 0.39
KATNA1-201ENST00000335643 IFIT3O14879 490 aaKnown RBP17.45■□□□□ 0.38
KATNA1-201ENST00000335643 SLC35G1Q2M3R5 365 aa17.45■□□□□ 0.38
KATNA1-201ENST00000335643 ADGRF4Q8IZF3 695 aa17.45■□□□□ 0.38
KATNA1-201ENST00000335643 IGDCC4Q8TDY8 1250 aa17.45■□□□□ 0.38
KATNA1-201ENST00000335643 CLEC4DQ8WXI8 215 aa17.45■□□□□ 0.38
KATNA1-201ENST00000335643 DPF3Q92784 378 aa17.45■□□□□ 0.38
KATNA1-201ENST00000335643 C11orf49Q9H6J7 331 aa17.45■□□□□ 0.38
KATNA1-201ENST00000335643 PCDH10Q9P2E7 1040 aa17.45■□□□□ 0.38
KATNA1-201ENST00000335643 MAD2L2Q9UI95 211 aa17.45■□□□□ 0.38
KATNA1-201ENST00000335643 SYNGAP1Q96PV0 1343 aa17.45■□□□□ 0.38
KATNA1-201ENST00000335643 LAMA2P24043 3122 aaKnown RBP17.45■□□□□ 0.38
KATNA1-201ENST00000335643 ADCY6O43306 1168 aa17.45■□□□□ 0.38
KATNA1-201ENST00000335643 PARP1P09874 1014 aaKnown RBP17.45■□□□□ 0.38
KATNA1-201ENST00000335643 CAPN2P17655 700 aa17.45■□□□□ 0.38
KATNA1-201ENST00000335643 ASPRV1Q53RT3 343 aa17.45■□□□□ 0.38
KATNA1-201ENST00000335643 NSMFQ6X4W1 530 aa17.45■□□□□ 0.38
KATNA1-201ENST00000335643 ZNF467Q7Z7K2 595 aaPredicted RBP17.45■□□□□ 0.38
KATNA1-201ENST00000335643 CCDC144CPQ8IYA2 1237 aa17.45■□□□□ 0.38
KATNA1-201ENST00000335643 SZT2Q5T011 3432 aa17.44■□□□□ 0.38
KATNA1-201ENST00000335643 H0YGN5 161 aa17.44■□□□□ 0.38
KATNA1-201ENST00000335643 POTEB2H3BUK9 544 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms