RNA–Protein interactions for RNA: ENST00000334352.8

USP16-201, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP16, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-201ENST00000334352 SCN10AQ9Y5Y9 1956 aa7.57□□□□□ -1.2
USP16-201ENST00000334352 A0A1W2PQ45 241 aaPredicted RBP7.57□□□□□ -1.2
USP16-201ENST00000334352 A0A1W2PQY0 241 aa7.57□□□□□ -1.2
USP16-201ENST00000334352 MPHOSPH10O00566 681 aaKnown RBP7.57□□□□□ -1.2
USP16-201ENST00000334352 TIMP1P01033 207 aa7.57□□□□□ -1.2
USP16-201ENST00000334352 CLTBP09497 229 aa7.57□□□□□ -1.2
USP16-201ENST00000334352 ACVR2BQ13705 512 aa7.57□□□□□ -1.2
USP16-201ENST00000334352 HERVK_113Q902F9 699 aa7.57□□□□□ -1.2
USP16-201ENST00000334352 IWS1Q96ST2 819 aa7.57□□□□□ -1.2
USP16-201ENST00000334352 MPHOSPH6Q99547 160 aaKnown RBP7.57□□□□□ -1.2
USP16-201ENST00000334352 NDUFB9Q9Y6M9 179 aa7.57□□□□□ -1.2
USP16-201ENST00000334352 ABCB11O95342 1321 aa7.56□□□□□ -1.2
USP16-201ENST00000334352 CCDC171Q6TFL3 1326 aa7.56□□□□□ -1.2
USP16-201ENST00000334352 EVX2Q03828 476 aa7.56□□□□□ -1.2
USP16-201ENST00000334352 AKNAD1Q5T1N1 836 aa7.56□□□□□ -1.2
USP16-201ENST00000334352 CWC22Q9HCG8 908 aaKnown RBP7.56□□□□□ -1.2
USP16-201ENST00000334352 POLR3EQ9NVU0 708 aa7.56□□□□□ -1.2
USP16-201ENST00000334352 ARVCFO00192 962 aa7.56□□□□□ -1.2
USP16-201ENST00000334352 PPIGQ13427 754 aaKnown RBP eCLIP7.56□□□□□ -1.2
USP16-201ENST00000334352 TAPT1Q6NXT6 567 aa7.56□□□□□ -1.2
USP16-201ENST00000334352 NAPBQ9H115 298 aa7.56□□□□□ -1.2
USP16-201ENST00000334352 XPNPEP3Q9NQH7 507 aa7.56□□□□□ -1.2
USP16-201ENST00000334352 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.56□□□□□ -1.2
USP16-201ENST00000334352 CNPY2Q9Y2B0 182 aa7.56□□□□□ -1.2
USP16-201ENST00000334352 RALGAPA2Q2PPJ7 1873 aa7.56□□□□□ -1.2
USP16-201ENST00000334352 SOX1O00570 391 aaPredicted RBP7.55□□□□□ -1.2
USP16-201ENST00000334352 TDO2P48775 406 aa7.55□□□□□ -1.2
USP16-201ENST00000334352 ACLYP53396 1101 aa7.55□□□□□ -1.2
USP16-201ENST00000334352 ASPRV1Q53RT3 343 aa7.55□□□□□ -1.2
USP16-201ENST00000334352 SNRNP48Q6IEG0 339 aaKnown RBP7.55□□□□□ -1.2
USP16-201ENST00000334352 MFSD5Q6N075 450 aa7.55□□□□□ -1.2
USP16-201ENST00000334352 NCAPG2Q86XI2 1143 aa7.55□□□□□ -1.2
USP16-201ENST00000334352 UBE2OQ9C0C9 1292 aaKnown RBP7.55□□□□□ -1.2
USP16-201ENST00000334352 CNNM2Q9H8M5 875 aa7.55□□□□□ -1.2
USP16-201ENST00000334352 ADD3Q9UEY8 706 aaKnown RBP7.55□□□□□ -1.2
USP16-201ENST00000334352 SOWAHBA6NEL2 793 aa7.55□□□□□ -1.2
USP16-201ENST00000334352 TLR3O15455 904 aaKnown RBP7.55□□□□□ -1.2
USP16-201ENST00000334352 SMARCA5O60264 1052 aaPredicted RBP7.55□□□□□ -1.2
USP16-201ENST00000334352 TSPY3P0CV98 308 aa7.55□□□□□ -1.2
USP16-201ENST00000334352 TSPY8P0CW00 308 aa7.55□□□□□ -1.2
USP16-201ENST00000334352 FAM126BQ8IXS8 530 aa7.55□□□□□ -1.2
USP16-201ENST00000334352 CLEC4DQ8WXI8 215 aa7.55□□□□□ -1.2
USP16-201ENST00000334352 CYP39A1Q9NYL5 469 aa7.55□□□□□ -1.2
USP16-201ENST00000334352 CLIP2Q9UDT6 1046 aa7.55□□□□□ -1.2
USP16-201ENST00000334352 CTNNA3Q9UI47 895 aa7.55□□□□□ -1.2
USP16-201ENST00000334352 CYP2D7A0A087X1C5 515 aa7.54□□□□□ -1.2
USP16-201ENST00000334352 CAND2O75155 1236 aa7.54□□□□□ -1.2
USP16-201ENST00000334352 STAM2O75886 525 aa7.54□□□□□ -1.2
USP16-201ENST00000334352 CYP2C19P33261 490 aa7.54□□□□□ -1.2
USP16-201ENST00000334352 TFAP4Q01664 338 aa7.54□□□□□ -1.2
USP16-201ENST00000334352 ZNF543Q08ER8 600 aa7.54□□□□□ -1.2
USP16-201ENST00000334352 FAAP100Q0VG06 881 aa7.54□□□□□ -1.2
USP16-201ENST00000334352 NFRKBQ6P4R8 1299 aa7.54□□□□□ -1.2
USP16-201ENST00000334352 PSRC1Q6PGN9 363 aaPredicted RBP7.54□□□□□ -1.2
USP16-201ENST00000334352 PHOSPHO2Q8TCD6 241 aa7.54□□□□□ -1.2
USP16-201ENST00000334352 LBHD1Q9BQE6 289 aaPredicted RBP7.54□□□□□ -1.2
USP16-201ENST00000334352 SPC25Q9HBM1 224 aa7.54□□□□□ -1.2
USP16-201ENST00000334352 TRIM43BA6NCK2 446 aa7.54□□□□□ -1.2
USP16-201ENST00000334352 HSPD1P10809 573 aaKnown RBP7.54□□□□□ -1.2
USP16-201ENST00000334352 DUSP28Q4G0W2 176 aa7.54□□□□□ -1.2
USP16-201ENST00000334352 SYDE2Q5VT97 1194 aa7.54□□□□□ -1.2
USP16-201ENST00000334352 XRRA1Q6P2D8 792 aa7.54□□□□□ -1.2
USP16-201ENST00000334352 KCNV1Q6PIU1 500 aa7.54□□□□□ -1.2
USP16-201ENST00000334352 ARMCX2Q7L311 632 aa7.54□□□□□ -1.2
USP16-201ENST00000334352 PLEKHM2Q8IWE5 1019 aa7.54□□□□□ -1.2
USP16-201ENST00000334352 TRIM43Q96BQ3 446 aaPredicted RBP7.54□□□□□ -1.2
USP16-201ENST00000334352 FSD1Q9BTV5 496 aa7.54□□□□□ -1.2
USP16-201ENST00000334352 PRR12Q9ULL5 1215 aa7.54□□□□□ -1.2
USP16-201ENST00000334352 EPB41L2O43491 1005 aaKnown RBP7.54□□□□□ -1.2
USP16-201ENST00000334352 SDSP20132 328 aa7.54□□□□□ -1.2
USP16-201ENST00000334352 HOXC8P31273 242 aa7.54□□□□□ -1.2
USP16-201ENST00000334352 CHD1LQ86WJ1 897 aa7.54□□□□□ -1.2
USP16-201ENST00000334352 KRT23Q9C075 422 aa7.54□□□□□ -1.2
USP16-201ENST00000334352 NID2Q14112 1375 aa7.54□□□□□ -1.2
USP16-201ENST00000334352 DCDC2CA8MYV0 355 aa7.53□□□□□ -1.2
USP16-201ENST00000334352 HSD17B4P51659 736 aa7.53□□□□□ -1.2
USP16-201ENST00000334352 SENP6Q9GZR1 1112 aaPredicted RBP7.53□□□□□ -1.2
USP16-201ENST00000334352 IL23AQ9NPF7 189 aa7.53□□□□□ -1.2
USP16-201ENST00000334352 A1CFQ9NQ94 594 aaKnown RBP7.53□□□□□ -1.2
USP16-201ENST00000334352 RIPK3Q9Y572 518 aa7.53□□□□□ -1.2
USP16-201ENST00000334352 PITPNM1O00562 1244 aa7.53□□□□□ -1.2
USP16-201ENST00000334352 FGAP02671 866 aa7.53□□□□□ -1.2
USP16-201ENST00000334352 PDHBP11177 359 aa7.53□□□□□ -1.2
USP16-201ENST00000334352 FPGSQ05932 587 aa7.53□□□□□ -1.2
USP16-201ENST00000334352 MCF2L2Q86YR7 1114 aa7.53□□□□□ -1.2
USP16-201ENST00000334352 TRERF1Q96PN7 1200 aa7.53□□□□□ -1.2
USP16-201ENST00000334352 TMEM47Q9BQJ4 181 aa7.53□□□□□ -1.2
USP16-201ENST00000334352 FBXO28Q9NVF7 368 aa7.53□□□□□ -1.2
USP16-201ENST00000334352 LMCD1Q9NZU5 365 aa7.53□□□□□ -1.2
USP16-201ENST00000334352 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.53□□□□□ -1.2
USP16-201ENST00000334352 PRKAG2Q9UGJ0 569 aa7.53□□□□□ -1.2
USP16-201ENST00000334352 ARIH1Q9Y4X5 557 aaPredicted RBP7.53□□□□□ -1.2
USP16-201ENST00000334352 ASTN1O14525 1302 aa7.53□□□□□ -1.2
USP16-201ENST00000334352 A6NJR5 290 aa7.52□□□□□ -1.21
USP16-201ENST00000334352 BAIAP3O94812 1187 aa7.52□□□□□ -1.21
USP16-201ENST00000334352 RPLP2P05387 115 aaKnown RBP7.52□□□□□ -1.21
USP16-201ENST00000334352 ADCYAP1R1P41586 468 aa7.52□□□□□ -1.21
USP16-201ENST00000334352 RCAN1P53805 252 aa7.52□□□□□ -1.21
USP16-201ENST00000334352 RAB30Q15771 203 aa7.52□□□□□ -1.21
USP16-201ENST00000334352 TRIM60Q495X7 471 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms