RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 PTGER2P43116 358 aa13.26□□□□□ -0.29
HDAC6-201ENST00000334136 SCRN1Q12765 414 aa13.26□□□□□ -0.29
HDAC6-201ENST00000334136 KRT40Q6A162 431 aa13.26□□□□□ -0.29
HDAC6-201ENST00000334136 TRMT1LQ7Z2T5 733 aaKnown RBP13.26□□□□□ -0.29
HDAC6-201ENST00000334136 MTA3Q9BTC8 594 aa13.26□□□□□ -0.29
HDAC6-201ENST00000334136 ELP3Q9H9T3 547 aa13.26□□□□□ -0.29
HDAC6-201ENST00000334136 F5H6K3 240 aa13.26□□□□□ -0.29
HDAC6-201ENST00000334136 BMP15O95972 392 aa13.26□□□□□ -0.29
HDAC6-201ENST00000334136 KLRC3Q07444 240 aa13.26□□□□□ -0.29
HDAC6-201ENST00000334136 TSGA10IPQ3SY00 556 aa13.26□□□□□ -0.29
HDAC6-201ENST00000334136 NBPF12Q5TAG4 269 aaPredicted RBP13.26□□□□□ -0.29
HDAC6-201ENST00000334136 PCDHA1Q9Y5I3 950 aa13.26□□□□□ -0.29
HDAC6-201ENST00000334136 BRWD3Q6RI45 1802 aa13.26□□□□□ -0.29
HDAC6-201ENST00000334136 SMCO2A6NFE2 343 aa13.25□□□□□ -0.29
HDAC6-201ENST00000334136 DDTLA6NHG4 134 aaPredicted RBP13.25□□□□□ -0.29
HDAC6-201ENST00000334136 GOLGA6L10A6NI86 522 aa13.25□□□□□ -0.29
HDAC6-201ENST00000334136 RHOXF2BP0C7M4 288 aa13.25□□□□□ -0.29
HDAC6-201ENST00000334136 SCG2P13521 617 aa13.25□□□□□ -0.29
HDAC6-201ENST00000334136 RASA1P20936 1047 aa13.25□□□□□ -0.29
HDAC6-201ENST00000334136 UBA7P41226 1012 aa13.25□□□□□ -0.29
HDAC6-201ENST00000334136 FAM160A1Q05DH4 1040 aa13.25□□□□□ -0.29
HDAC6-201ENST00000334136 ENOX2Q16206 610 aaKnown RBP13.25□□□□□ -0.29
HDAC6-201ENST00000334136 USP50Q70EL3 339 aaPredicted RBP13.25□□□□□ -0.29
HDAC6-201ENST00000334136 KIAA1524Q8TCG1 905 aa13.25□□□□□ -0.29
HDAC6-201ENST00000334136 RHOXF2Q9BQY4 288 aa13.25□□□□□ -0.29
HDAC6-201ENST00000334136 AMNQ9BXJ7 453 aa13.25□□□□□ -0.29
HDAC6-201ENST00000334136 VPS18Q9P253 973 aa13.25□□□□□ -0.29
HDAC6-201ENST00000334136 PNMA2Q9UL42 364 aa13.25□□□□□ -0.29
HDAC6-201ENST00000334136 CCPG1Q9ULG6 757 aa13.25□□□□□ -0.29
HDAC6-201ENST00000334136 MRPL11Q9Y3B7 192 aaKnown RBP13.25□□□□□ -0.29
HDAC6-201ENST00000334136 GOLGA6L9A6NEM1 432 aa13.25□□□□□ -0.29
HDAC6-201ENST00000334136 GLTPD2A6NH11 291 aa13.25□□□□□ -0.29
HDAC6-201ENST00000334136 N4BP3O15049 544 aa13.25□□□□□ -0.29
HDAC6-201ENST00000334136 STX17P56962 302 aa13.25□□□□□ -0.29
HDAC6-201ENST00000334136 DMTNQ08495 405 aa13.25□□□□□ -0.29
HDAC6-201ENST00000334136 LETM2Q2VYF4 491 aa13.25□□□□□ -0.29
HDAC6-201ENST00000334136 BRAPQ7Z569 592 aa13.25□□□□□ -0.29
HDAC6-201ENST00000334136 ZBTB21Q9ULJ3 1066 aa13.25□□□□□ -0.29
HDAC6-201ENST00000334136 GAKO14976 1311 aa13.25□□□□□ -0.29
HDAC6-201ENST00000334136 C10orf71Q711Q0 1435 aa13.25□□□□□ -0.29
HDAC6-201ENST00000334136 HUNKP57058 714 aa13.24□□□□□ -0.29
HDAC6-201ENST00000334136 GABPB1Q06547 395 aaPredicted RBP13.24□□□□□ -0.29
HDAC6-201ENST00000334136 FAM160B2Q86V87 743 aa13.24□□□□□ -0.29
HDAC6-201ENST00000334136 NCAPG2Q86XI2 1143 aa13.24□□□□□ -0.29
HDAC6-201ENST00000334136 C7orf43Q8WVR3 580 aa13.24□□□□□ -0.29
HDAC6-201ENST00000334136 GPKOWQ92917 476 aaPredicted RBP eCLIP13.24□□□□□ -0.291e-6■□□□□ 11.3
HDAC6-201ENST00000334136 IDI2Q9BXS1 227 aa13.24□□□□□ -0.29
HDAC6-201ENST00000334136 SYDE2Q5VT97 1194 aa13.24□□□□□ -0.29
HDAC6-201ENST00000334136 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.24□□□□□ -0.29
HDAC6-201ENST00000334136 ANKRD13AQ8IZ07 590 aa13.24□□□□□ -0.29
HDAC6-201ENST00000334136 REXO1Q8N1G1 1221 aaKnown RBP13.24□□□□□ -0.29
HDAC6-201ENST00000334136 MTMR4Q9NYA4 1195 aa13.24□□□□□ -0.29
HDAC6-201ENST00000334136 BIN2Q9UBW5 565 aaPredicted RBP13.24□□□□□ -0.29
HDAC6-201ENST00000334136 ZDHHC9Q9Y397 364 aa13.24□□□□□ -0.29
HDAC6-201ENST00000334136 PCDHAC2Q9Y5I4 1007 aa13.24□□□□□ -0.29
HDAC6-201ENST00000334136 ZNF541Q9H0D2 1346 aa13.24□□□□□ -0.29
HDAC6-201ENST00000334136 PIK3AP1Q6ZUJ8 805 aa13.24□□□□□ -0.29
HDAC6-201ENST00000334136 CLEC10AQ8IUN9 316 aa13.24□□□□□ -0.29
HDAC6-201ENST00000334136 GLIS2Q9BZE0 524 aaPredicted RBP13.24□□□□□ -0.29
HDAC6-201ENST00000334136 WDR19Q8NEZ3 1342 aa13.24□□□□□ -0.29
HDAC6-201ENST00000334136 MAP9Q49MG5 647 aa13.24□□□□□ -0.29
HDAC6-201ENST00000334136 FAM83BQ5T0W9 1011 aa13.24□□□□□ -0.29
HDAC6-201ENST00000334136 FKBP1CQ5VVH2 108 aa13.24□□□□□ -0.29
HDAC6-201ENST00000334136 ANKRD35Q8N283 1001 aa13.24□□□□□ -0.29
HDAC6-201ENST00000334136 RNF26Q9BY78 433 aaPredicted RBP13.24□□□□□ -0.29
HDAC6-201ENST00000334136 PSTPIP2Q9H939 334 aa13.24□□□□□ -0.29
HDAC6-201ENST00000334136 DDX4Q9NQI0 724 aaKnown RBP13.24□□□□□ -0.29
HDAC6-201ENST00000334136 ADAMTS7Q9UKP4 1686 aa13.23□□□□□ -0.29
HDAC6-201ENST00000334136 SHTN1A0MZ66 631 aa13.23□□□□□ -0.29
HDAC6-201ENST00000334136 UBE2Q2LH0YL09 131 aa13.23□□□□□ -0.29
HDAC6-201ENST00000334136 CCNA1P78396 465 aa13.23□□□□□ -0.29
HDAC6-201ENST00000334136 CUL4AQ13619 759 aa13.23□□□□□ -0.29
HDAC6-201ENST00000334136 FAM107BQ9H098 131 aa13.23□□□□□ -0.29
HDAC6-201ENST00000334136 ANAPC4Q9UJX5 808 aa13.23□□□□□ -0.29
HDAC6-201ENST00000334136 PNMA3Q9UL41 463 aa13.23□□□□□ -0.29
HDAC6-201ENST00000334136 PPP2R3BQ9Y5P8 575 aa13.23□□□□□ -0.29
HDAC6-201ENST00000334136 CTNND1O60716 968 aaKnown RBP13.23□□□□□ -0.29
HDAC6-201ENST00000334136 MYCLP12524 364 aaPredicted RBP13.23□□□□□ -0.29
HDAC6-201ENST00000334136 IFNAR1P17181 557 aa13.23□□□□□ -0.29
HDAC6-201ENST00000334136 MCM7P33993 719 aa13.23□□□□□ -0.29
HDAC6-201ENST00000334136 HMGCS2P54868 508 aa13.23□□□□□ -0.29
HDAC6-201ENST00000334136 KRBA2Q6ZNG9 492 aa13.23□□□□□ -0.29
HDAC6-201ENST00000334136 CCDC84Q86UT8 332 aaPredicted RBP13.23□□□□□ -0.29
HDAC6-201ENST00000334136 DCAF4Q8WV16 495 aa13.23□□□□□ -0.29
HDAC6-201ENST00000334136 PDLIM2Q96JY6 352 aa13.23□□□□□ -0.29
HDAC6-201ENST00000334136 PIGSQ96S52 555 aa13.23□□□□□ -0.29
HDAC6-201ENST00000334136 LY9Q9HBG7 655 aa13.23□□□□□ -0.29
HDAC6-201ENST00000334136 SIPA1L3O60292 1781 aaPredicted RBP13.23□□□□□ -0.29
HDAC6-201ENST00000334136 RHBDL3P58872 404 aa13.23□□□□□ -0.29
HDAC6-201ENST00000334136 NONOQ15233 471 aaKnown RBP eCLIP13.23□□□□□ -0.29
HDAC6-201ENST00000334136 TMEM132AQ24JP5 1023 aa13.23□□□□□ -0.29
HDAC6-201ENST00000334136 KRT25Q7Z3Z0 450 aa13.23□□□□□ -0.29
HDAC6-201ENST00000334136 TJP1Q07157 1748 aa13.23□□□□□ -0.29
HDAC6-201ENST00000334136 RCSD1Q6JBY9 416 aa13.22□□□□□ -0.29
HDAC6-201ENST00000334136 TRPM4Q8TD43 1214 aa13.22□□□□□ -0.29
HDAC6-201ENST00000334136 CACTINQ8WUQ7 758 aaKnown RBP13.22□□□□□ -0.29
HDAC6-201ENST00000334136 JADE2Q9NQC1 790 aa13.22□□□□□ -0.29
HDAC6-201ENST00000334136 ZNF157P51786 506 aaPredicted RBP13.22□□□□□ -0.29
HDAC6-201ENST00000334136 RILPL1Q5EBL4 403 aa13.22□□□□□ -0.29
HDAC6-201ENST00000334136 ZKSCAN4Q969J2 545 aaPredicted RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms