RNA–Protein interactions for RNA: ENST00000333990.10

POLR1B-202, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 4,376 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-202ENST00000333990 SERTAD1Q9UHV2 236 aa12.49□□□□□ -0.41
POLR1B-202ENST00000333990 RAPGEF1Q13905 1077 aa12.48□□□□□ -0.41
POLR1B-202ENST00000333990 DEFB132Q7Z7B7 95 aa12.48□□□□□ -0.41
POLR1B-202ENST00000333990 PDCL2Q8N4E4 241 aa12.48□□□□□ -0.41
POLR1B-202ENST00000333990 SLC17A8Q8NDX2 589 aa12.48□□□□□ -0.41
POLR1B-202ENST00000333990 NSUN4Q96CB9 384 aaKnown RBP12.48□□□□□ -0.41
POLR1B-202ENST00000333990 IQCDQ96DY2 449 aa12.48□□□□□ -0.41
POLR1B-202ENST00000333990 ADPGKQ9BRR6 497 aa12.48□□□□□ -0.41
POLR1B-202ENST00000333990 AP5M1Q9H0R1 490 aa12.48□□□□□ -0.41
POLR1B-202ENST00000333990 USP17L10C9JJH3 530 aa12.48□□□□□ -0.41
POLR1B-202ENST00000333990 RPS12P25398 132 aaKnown RBP12.48□□□□□ -0.41
POLR1B-202ENST00000333990 SLC39A14Q15043 492 aa12.48□□□□□ -0.41
POLR1B-202ENST00000333990 ZRSR2Q15696 482 aaKnown RBP12.48□□□□□ -0.41
POLR1B-202ENST00000333990 NOX5Q96PH1 765 aa12.48□□□□□ -0.41
POLR1B-202ENST00000333990 ORC4O43929 436 aa12.48□□□□□ -0.41
POLR1B-202ENST00000333990 PPP6R2O75170 966 aa12.48□□□□□ -0.41
POLR1B-202ENST00000333990 ENTPD3O75355 529 aa12.48□□□□□ -0.41
POLR1B-202ENST00000333990 MMP1P03956 469 aa12.48□□□□□ -0.41
POLR1B-202ENST00000333990 PPP2R5AQ15172 486 aa12.48□□□□□ -0.41
POLR1B-202ENST00000333990 DDX12PQ92771 950 aa12.48□□□□□ -0.41
POLR1B-202ENST00000333990 SH3GLB2Q9NR46 395 aa12.48□□□□□ -0.41
POLR1B-202ENST00000333990 POLR3EQ9NVU0 708 aa12.48□□□□□ -0.41
POLR1B-202ENST00000333990 NFE2L3Q9Y4A8 694 aa12.48□□□□□ -0.41
POLR1B-202ENST00000333990 BCL9O00512 1426 aa12.48□□□□□ -0.41
POLR1B-202ENST00000333990 PTGS1P23219 599 aa12.48□□□□□ -0.41
POLR1B-202ENST00000333990 SETQ01105 290 aaPredicted RBP12.48□□□□□ -0.41
POLR1B-202ENST00000333990 AP3B2Q13367 1082 aa12.48□□□□□ -0.41
POLR1B-202ENST00000333990 MYOCDQ8IZQ8 938 aa12.48□□□□□ -0.41
POLR1B-202ENST00000333990 NEDD1Q8NHV4 660 aa12.48□□□□□ -0.41
POLR1B-202ENST00000333990 MAPK8IP1Q9UQF2 711 aa12.48□□□□□ -0.41
POLR1B-202ENST00000333990 GTPBP6O43824 516 aaPredicted RBP12.47□□□□□ -0.41
POLR1B-202ENST00000333990 KIAA0753Q2KHM9 967 aa12.47□□□□□ -0.41
POLR1B-202ENST00000333990 TMCO3Q6UWJ1 677 aa12.47□□□□□ -0.41
POLR1B-202ENST00000333990 ZNF771Q7L3S4 317 aaPredicted RBP12.47□□□□□ -0.41
POLR1B-202ENST00000333990 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.47□□□□□ -0.41
POLR1B-202ENST00000333990 FAM178BQ8IXR5 827 aa12.47□□□□□ -0.41
POLR1B-202ENST00000333990 TMEM47Q9BQJ4 181 aa12.47□□□□□ -0.41
POLR1B-202ENST00000333990 ZNF577Q9BSK1 485 aa12.47□□□□□ -0.41
POLR1B-202ENST00000333990 CENPHQ9H3R5 247 aa12.47□□□□□ -0.41
POLR1B-202ENST00000333990 FEM1BQ9UK73 627 aa12.47□□□□□ -0.41
POLR1B-202ENST00000333990 ZHX2Q9Y6X8 837 aa12.47□□□□□ -0.41
POLR1B-202ENST00000333990 GSG1L2A8MUP6 293 aa12.47□□□□□ -0.41
POLR1B-202ENST00000333990 AKR1B15C9JRZ8 316 aaPredicted RBP12.47□□□□□ -0.41
POLR1B-202ENST00000333990 PLSCR1O15162 318 aa12.47□□□□□ -0.41
POLR1B-202ENST00000333990 TMTC3Q6ZXV5 915 aa12.47□□□□□ -0.41
POLR1B-202ENST00000333990 CCND2P30279 289 aa12.47□□□□□ -0.41
POLR1B-202ENST00000333990 FBXO33Q7Z6M2 555 aa12.47□□□□□ -0.41
POLR1B-202ENST00000333990 COL23A1Q86Y22 540 aaPredicted RBP12.47□□□□□ -0.41
POLR1B-202ENST00000333990 TBCKQ8TEA7 893 aa12.47□□□□□ -0.41
POLR1B-202ENST00000333990 LMBRD1Q9NUN5 540 aa12.47□□□□□ -0.41
POLR1B-202ENST00000333990 KIAA1468Q9P260 1216 aa12.47□□□□□ -0.41
POLR1B-202ENST00000333990 CNOT7Q9UIV1 285 aaKnown RBP12.47□□□□□ -0.41
POLR1B-202ENST00000333990 COPB2P35606 906 aa12.46□□□□□ -0.41
POLR1B-202ENST00000333990 RAD51AP2Q09MP3 1159 aa12.46□□□□□ -0.41
POLR1B-202ENST00000333990 RCSD1Q6JBY9 416 aa12.46□□□□□ -0.41
POLR1B-202ENST00000333990 METTL13Q8N6R0 699 aa12.46□□□□□ -0.41
POLR1B-202ENST00000333990 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.46□□□□□ -0.41
POLR1B-202ENST00000333990 VPS16Q9H269 839 aa12.46□□□□□ -0.41
POLR1B-202ENST00000333990 CYP2D6P10635 497 aa12.46□□□□□ -0.41
POLR1B-202ENST00000333990 DPEP1P16444 411 aa12.46□□□□□ -0.41
POLR1B-202ENST00000333990 HOXA7P31268 230 aaPredicted RBP12.46□□□□□ -0.41
POLR1B-202ENST00000333990 ABCD1P33897 745 aa12.46□□□□□ -0.41
POLR1B-202ENST00000333990 MMP14P50281 582 aa12.46□□□□□ -0.41
POLR1B-202ENST00000333990 TGFB2P61812 414 aa12.46□□□□□ -0.41
POLR1B-202ENST00000333990 HDLBPQ00341 1268 aaKnown RBP12.46□□□□□ -0.41
POLR1B-202ENST00000333990 KIF23Q02241 960 aaPredicted RBP12.46□□□□□ -0.41
POLR1B-202ENST00000333990 SCARF1Q14162 830 aa12.46□□□□□ -0.41
POLR1B-202ENST00000333990 SEPT2Q15019 361 aa12.46□□□□□ -0.41
POLR1B-202ENST00000333990 CTR9Q6PD62 1173 aa12.46□□□□□ -0.41
POLR1B-202ENST00000333990 DPH6Q7L8W6 267 aa12.46□□□□□ -0.41
POLR1B-202ENST00000333990 PAXBP1Q9Y5B6 917 aa12.46□□□□□ -0.41
POLR1B-202ENST00000333990 KDM6AO15550 1401 aaPredicted RBP12.46□□□□□ -0.42
POLR1B-202ENST00000333990 POLGP54098 1239 aaPredicted RBP12.46□□□□□ -0.42
POLR1B-202ENST00000333990 RSBN1LQ6PCB5 846 aaPredicted RBP12.46□□□□□ -0.42
POLR1B-202ENST00000333990 SLC7A3Q8WY07 619 aa12.46□□□□□ -0.42
POLR1B-202ENST00000333990 COA7Q96BR5 231 aa12.46□□□□□ -0.42
POLR1B-202ENST00000333990 SLF1Q9BQI6 1058 aa12.46□□□□□ -0.42
POLR1B-202ENST00000333990 NUCKS1Q9H1E3 243 aaKnown RBP12.46□□□□□ -0.42
POLR1B-202ENST00000333990 PCDHA7Q9UN72 937 aa12.46□□□□□ -0.42
POLR1B-202ENST00000333990 DAGLAQ9Y4D2 1042 aa12.46□□□□□ -0.42
POLR1B-202ENST00000333990 YWHAEP62258 255 aaKnown RBP12.46□□□□□ -0.42
POLR1B-202ENST00000333990 TFDP1Q14186 410 aa12.46□□□□□ -0.42
POLR1B-202ENST00000333990 FAM102BQ5T8I3 360 aa12.46□□□□□ -0.42
POLR1B-202ENST00000333990 RSPH3Q86UC2 560 aa12.46□□□□□ -0.42
POLR1B-202ENST00000333990 NELFCDQ8IXH7 590 aa12.46□□□□□ -0.42
POLR1B-202ENST00000333990 MICALL2Q8IY33 904 aa12.46□□□□□ -0.42
POLR1B-202ENST00000333990 IGSF22Q8N9C0 903 aa12.46□□□□□ -0.42
POLR1B-202ENST00000333990 STAMQ92783 540 aa12.46□□□□□ -0.42
POLR1B-202ENST00000333990 UIMC1Q96RL1 719 aa12.46□□□□□ -0.42
POLR1B-202ENST00000333990 STK36Q9NRP7 1315 aa12.45□□□□□ -0.42
POLR1B-202ENST00000333990 ZBTB5O15062 677 aa12.45□□□□□ -0.42
POLR1B-202ENST00000333990 P4HA1P13674 534 aa12.45□□□□□ -0.42
POLR1B-202ENST00000333990 HLTFQ14527 1009 aaKnown RBP eCLIP12.45□□□□□ -0.42
POLR1B-202ENST00000333990 FAM26FQ5R3K3 315 aa12.45□□□□□ -0.42
POLR1B-202ENST00000333990 C12orf60Q5U649 245 aa12.45□□□□□ -0.42
POLR1B-202ENST00000333990 KRBA2Q6ZNG9 492 aa12.45□□□□□ -0.42
POLR1B-202ENST00000333990 TBC1D10CQ8IV04 446 aa12.45□□□□□ -0.42
POLR1B-202ENST00000333990 TDRD7Q8NHU6 1098 aaKnown RBP12.45□□□□□ -0.42
POLR1B-202ENST00000333990 NELFBQ8WX92 580 aa12.45□□□□□ -0.42
POLR1B-202ENST00000333990 NBPF3Q9H094 633 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms