RNA–Protein interactions for RNA: ENST00000333001.10

CMTM1-203, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 883 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-203ENST00000333001 PRR12Q9ULL5 1215 aa14.39□□□□□ -0.11
CMTM1-203ENST00000333001 MTMR7Q9Y216 660 aa14.39□□□□□ -0.11
CMTM1-203ENST00000333001 CNPY2Q9Y2B0 182 aa14.39□□□□□ -0.11
CMTM1-203ENST00000333001 PLXNA1Q9UIW2 1896 aa14.39□□□□□ -0.11
CMTM1-203ENST00000333001 NEDD4P46934 1319 aa14.39□□□□□ -0.11
CMTM1-203ENST00000333001 DNAJC25-GNG10A0A024R161 153 aa14.38□□□□□ -0.11
CMTM1-203ENST00000333001 SGSM2O43147 1006 aa14.38□□□□□ -0.11
CMTM1-203ENST00000333001 PDHBP11177 359 aa14.38□□□□□ -0.11
CMTM1-203ENST00000333001 MAMDC4Q6UXC1 1216 aa14.38□□□□□ -0.11
CMTM1-203ENST00000333001 ZSCAN10Q96SZ4 725 aaPredicted RBP14.38□□□□□ -0.11
CMTM1-203ENST00000333001 UBAC1Q9BSL1 405 aa14.38□□□□□ -0.11
CMTM1-203ENST00000333001 KAT14Q9H8E8 782 aa14.38□□□□□ -0.11
CMTM1-203ENST00000333001 ZSWIM5Q9P217 1185 aa14.38□□□□□ -0.11
CMTM1-203ENST00000333001 PFASO15067 1338 aa14.38□□□□□ -0.11
CMTM1-203ENST00000333001 SYNGAP1Q96PV0 1343 aa14.38□□□□□ -0.11
CMTM1-203ENST00000333001 B4E1Z4 1266 aa14.37□□□□□ -0.11
CMTM1-203ENST00000333001 DNM1LO00429 736 aa14.37□□□□□ -0.11
CMTM1-203ENST00000333001 ICAM1P05362 532 aa14.37□□□□□ -0.11
CMTM1-203ENST00000333001 SNHG28P0DPA3 235 aa14.37□□□□□ -0.11
CMTM1-203ENST00000333001 MNX1P50219 401 aaPredicted RBP14.37□□□□□ -0.11
CMTM1-203ENST00000333001 ZNF543Q08ER8 600 aa14.37□□□□□ -0.11
CMTM1-203ENST00000333001 SYDE2Q5VT97 1194 aa14.37□□□□□ -0.11
CMTM1-203ENST00000333001 KIAA1211Q6ZU35 1233 aa14.37□□□□□ -0.11
CMTM1-203ENST00000333001 TRPV1Q8NER1 839 aa14.37□□□□□ -0.11
CMTM1-203ENST00000333001 DIS3LQ8TF46 1054 aaKnown RBP14.37□□□□□ -0.11
CMTM1-203ENST00000333001 TRERF1Q96PN7 1200 aa14.37□□□□□ -0.11
CMTM1-203ENST00000333001 RANBP17Q9H2T7 1088 aaKnown RBP14.37□□□□□ -0.11
CMTM1-203ENST00000333001 RNF146Q9NTX7 359 aa14.37□□□□□ -0.11
CMTM1-203ENST00000333001 ZNF536O15090 1300 aa14.37□□□□□ -0.11
CMTM1-203ENST00000333001 SMCHD1A6NHR9 2005 aa14.36□□□□□ -0.11
CMTM1-203ENST00000333001 A0A1W2PPC1 479 aa14.36□□□□□ -0.11
CMTM1-203ENST00000333001 RARBP10826 455 aa14.36□□□□□ -0.11
CMTM1-203ENST00000333001 COL6A1P12109 1028 aa14.36□□□□□ -0.11
CMTM1-203ENST00000333001 ALAS1P13196 640 aa14.36□□□□□ -0.11
CMTM1-203ENST00000333001 CCDC174Q6PII3 467 aa14.36□□□□□ -0.11
CMTM1-203ENST00000333001 PNMA1Q8ND90 353 aa14.36□□□□□ -0.11
CMTM1-203ENST00000333001 CHMP4CQ96CF2 233 aa14.36□□□□□ -0.11
CMTM1-203ENST00000333001 AGBL1Q96MI9 1066 aa14.36□□□□□ -0.11
CMTM1-203ENST00000333001 ZKSCAN3Q9BRR0 538 aa14.36□□□□□ -0.11
CMTM1-203ENST00000333001 GPCPD1Q9NPB8 672 aa14.36□□□□□ -0.11
CMTM1-203ENST00000333001 HOMER2Q9NSB8 354 aa14.36□□□□□ -0.11
CMTM1-203ENST00000333001 CCPG1Q9ULG6 757 aa14.36□□□□□ -0.11
CMTM1-203ENST00000333001 LAMA3Q16787 3333 aa14.35□□□□□ -0.11
CMTM1-203ENST00000333001 ASB14A6NK59 587 aa14.35□□□□□ -0.11
CMTM1-203ENST00000333001 KBTBD13C9JR72 458 aa14.35□□□□□ -0.11
CMTM1-203ENST00000333001 POTEB2H3BUK9 544 aa14.35□□□□□ -0.11
CMTM1-203ENST00000333001 AKR1A1P14550 325 aa14.35□□□□□ -0.11
CMTM1-203ENST00000333001 SLC16A2P36021 539 aa14.35□□□□□ -0.11
CMTM1-203ENST00000333001 ASPRV1Q53RT3 343 aa14.35□□□□□ -0.11
CMTM1-203ENST00000333001 PRAMEF19Q5SWL8 479 aa14.35□□□□□ -0.11
CMTM1-203ENST00000333001 TTBK2Q6IQ55 1244 aa14.35□□□□□ -0.11
CMTM1-203ENST00000333001 MAP4K1Q92918 833 aa14.35□□□□□ -0.11
CMTM1-203ENST00000333001 MAF1Q9H063 256 aa14.35□□□□□ -0.11
CMTM1-203ENST00000333001 IL25Q9H293 177 aa14.35□□□□□ -0.11
CMTM1-203ENST00000333001 ABHD16BQ9H3Z7 469 aa14.35□□□□□ -0.11
CMTM1-203ENST00000333001 FAM184BQ9ULE4 1060 aa14.35□□□□□ -0.11
CMTM1-203ENST00000333001 FRMPD2Q68DX3 1309 aaPredicted RBP14.35□□□□□ -0.11
CMTM1-203ENST00000333001 FRMPD3Q5JV73 1810 aa14.34□□□□□ -0.11
CMTM1-203ENST00000333001 ERICH2A1L162 156 aa14.34□□□□□ -0.11
CMTM1-203ENST00000333001 PTH1RQ03431 593 aa14.34□□□□□ -0.11
CMTM1-203ENST00000333001 SART3Q15020 963 aaKnown RBP14.34□□□□□ -0.11
CMTM1-203ENST00000333001 BMP2KLQ5H9B9 411 aa14.34□□□□□ -0.11
CMTM1-203ENST00000333001 IFIT1BQ5T764 474 aaKnown RBP14.34□□□□□ -0.11
CMTM1-203ENST00000333001 RALYLQ86SE5 291 aaKnown RBP14.34□□□□□ -0.11
CMTM1-203ENST00000333001 ENAHQ8N8S7 591 aaPredicted RBP14.34□□□□□ -0.11
CMTM1-203ENST00000333001 FAM133AQ8N9E0 248 aa14.34□□□□□ -0.11
CMTM1-203ENST00000333001 NCOA7Q8NI08 942 aa14.34□□□□□ -0.11
CMTM1-203ENST00000333001 A1CFQ9NQ94 594 aaKnown RBP14.34□□□□□ -0.11
CMTM1-203ENST00000333001 TNKSO95271 1327 aa14.34□□□□□ -0.11
CMTM1-203ENST00000333001 A0A0C4DFX4 3053 aa14.33□□□□□ -0.11
CMTM1-203ENST00000333001 COL6A3P12111 3177 aa14.33□□□□□ -0.12
CMTM1-203ENST00000333001 LOC102724159A0A0B4J2E5 919 aa14.33□□□□□ -0.12
CMTM1-203ENST00000333001 NEFLP07196 543 aa14.33□□□□□ -0.12
CMTM1-203ENST00000333001 CYP21A2P08686 494 aa14.33□□□□□ -0.12
CMTM1-203ENST00000333001 PARP1P09874 1014 aaKnown RBP14.33□□□□□ -0.12
CMTM1-203ENST00000333001 ZNF865P0CJ78 1059 aaPredicted RBP14.33□□□□□ -0.12
CMTM1-203ENST00000333001 PWP2Q15269 919 aaKnown RBP14.33□□□□□ -0.12
CMTM1-203ENST00000333001 CASC1Q6TDU7 716 aa14.33□□□□□ -0.12
CMTM1-203ENST00000333001 RNF180Q86T96 592 aa14.33□□□□□ -0.12
CMTM1-203ENST00000333001 CCDC136Q96JN2 1154 aa14.33□□□□□ -0.12
CMTM1-203ENST00000333001 SENP6Q9GZR1 1112 aaPredicted RBP14.33□□□□□ -0.12
CMTM1-203ENST00000333001 XPNPEP3Q9NQH7 507 aa14.33□□□□□ -0.12
CMTM1-203ENST00000333001 WDR19Q8NEZ3 1342 aa14.33□□□□□ -0.12
CMTM1-203ENST00000333001 SNAI1O95863 264 aaPredicted RBP14.32□□□□□ -0.12
CMTM1-203ENST00000333001 SNAP25P60880 206 aa14.32□□□□□ -0.12
CMTM1-203ENST00000333001 ACVR2BQ13705 512 aa14.32□□□□□ -0.12
CMTM1-203ENST00000333001 GJC2Q5T442 439 aaPredicted RBP14.32□□□□□ -0.12
CMTM1-203ENST00000333001 ARMCX2Q7L311 632 aa14.32□□□□□ -0.12
CMTM1-203ENST00000333001 RASGRP2Q7LDG7 609 aa14.32□□□□□ -0.12
CMTM1-203ENST00000333001 SLC17A8Q8NDX2 589 aa14.32□□□□□ -0.12
CMTM1-203ENST00000333001 MPHOSPH6Q99547 160 aaKnown RBP14.32□□□□□ -0.12
CMTM1-203ENST00000333001 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.32□□□□□ -0.12
CMTM1-203ENST00000333001 CYP39A1Q9NYL5 469 aa14.32□□□□□ -0.12
CMTM1-203ENST00000333001 ADD3Q9UEY8 706 aaKnown RBP14.32□□□□□ -0.12
CMTM1-203ENST00000333001 B4DLN1 442 aa14.31□□□□□ -0.12
CMTM1-203ENST00000333001 E7EWF7 191 aa14.31□□□□□ -0.12
CMTM1-203ENST00000333001 IFIT3O14879 490 aaKnown RBP14.31□□□□□ -0.12
CMTM1-203ENST00000333001 DUSP11O75319 330 aaKnown RBP14.31□□□□□ -0.12
CMTM1-203ENST00000333001 MRPL12P52815 198 aaKnown RBP14.31□□□□□ -0.12
CMTM1-203ENST00000333001 CNTN2Q02246 1040 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms