RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 USP28Q96RU2 1077 aa12.65□□□□□ -0.38
COL4A5-201ENST00000328300 KRT5P13647 590 aa12.65□□□□□ -0.39
COL4A5-201ENST00000328300 NECTIN1Q15223 517 aa12.65□□□□□ -0.39
COL4A5-201ENST00000328300 TAF12Q16514 161 aa12.65□□□□□ -0.39
COL4A5-201ENST00000328300 PPP2R5EQ16537 467 aa12.65□□□□□ -0.39
COL4A5-201ENST00000328300 GSTA5Q7RTV2 222 aa12.65□□□□□ -0.39
COL4A5-201ENST00000328300 CCDC50Q8IVM0 306 aa12.65□□□□□ -0.39
COL4A5-201ENST00000328300 IQCGQ9H095 443 aaKnown RBP12.65□□□□□ -0.39
COL4A5-201ENST00000328300 USP42Q9H9J4 1324 aaKnown RBP12.64□□□□□ -0.39
COL4A5-201ENST00000328300 TMOD1P28289 359 aa12.64□□□□□ -0.39
COL4A5-201ENST00000328300 NKX1-1Q15270 411 aaPredicted RBP12.64□□□□□ -0.39
COL4A5-201ENST00000328300 INF2Q27J81 1249 aa12.64□□□□□ -0.39
COL4A5-201ENST00000328300 ARL6IP4Q66PJ3 421 aaKnown RBP12.64□□□□□ -0.39
COL4A5-201ENST00000328300 ANKRD35Q8N283 1001 aa12.64□□□□□ -0.39
COL4A5-201ENST00000328300 CRAMP1Q96RY5 1269 aa12.64□□□□□ -0.39
COL4A5-201ENST00000328300 STRBPQ96SI9 672 aaKnown RBP12.64□□□□□ -0.39
COL4A5-201ENST00000328300 MAK16Q9BXY0 300 aaKnown RBP12.64□□□□□ -0.39
COL4A5-201ENST00000328300 CPS1P31327 1500 aa12.64□□□□□ -0.39
COL4A5-201ENST00000328300 RGL2O15211 777 aa12.64□□□□□ -0.39
COL4A5-201ENST00000328300 PRR16Q569H4 304 aa12.64□□□□□ -0.39
COL4A5-201ENST00000328300 HSP90AA4PQ58FG1 418 aa12.64□□□□□ -0.39
COL4A5-201ENST00000328300 SIRT2Q8IXJ6 389 aa12.64□□□□□ -0.39
COL4A5-201ENST00000328300 OSBP2Q969R2 916 aa12.64□□□□□ -0.39
COL4A5-201ENST00000328300 ITSN1Q15811 1721 aa12.64□□□□□ -0.39
COL4A5-201ENST00000328300 RIMS1Q86UR5 1692 aaKnown RBP12.64□□□□□ -0.39
COL4A5-201ENST00000328300 ATP5DP30049 168 aa12.64□□□□□ -0.39
COL4A5-201ENST00000328300 ARID5AQ03989 594 aa12.64□□□□□ -0.39
COL4A5-201ENST00000328300 SEMA3FQ13275 785 aa12.64□□□□□ -0.39
COL4A5-201ENST00000328300 EAPPQ56P03 285 aaPredicted RBP12.64□□□□□ -0.39
COL4A5-201ENST00000328300 TPH2Q8IWU9 490 aa12.64□□□□□ -0.39
COL4A5-201ENST00000328300 GPR161Q8N6U8 529 aaKnown RBP12.64□□□□□ -0.39
COL4A5-201ENST00000328300 GAS8O95995 478 aa12.64□□□□□ -0.39
COL4A5-201ENST00000328300 GLG1Q92896 1179 aa12.64□□□□□ -0.39
COL4A5-201ENST00000328300 SECISBP2LQ93073 1101 aaKnown RBP12.64□□□□□ -0.39
COL4A5-201ENST00000328300 PIH1D3Q9NQM4 214 aaKnown RBP12.64□□□□□ -0.39
COL4A5-201ENST00000328300 SRP68Q9UHB9 627 aaKnown RBP12.64□□□□□ -0.39
COL4A5-201ENST00000328300 A6NNZ2 444 aa12.64□□□□□ -0.39
COL4A5-201ENST00000328300 MMP1P03956 469 aa12.64□□□□□ -0.39
COL4A5-201ENST00000328300 XRCC5P13010 732 aaKnown RBP12.64□□□□□ -0.39
COL4A5-201ENST00000328300 TUBB8Q3ZCM7 444 aa12.64□□□□□ -0.39
COL4A5-201ENST00000328300 SYDE2Q5VT97 1194 aa12.64□□□□□ -0.39
COL4A5-201ENST00000328300 VPS16Q9H269 839 aa12.64□□□□□ -0.39
COL4A5-201ENST00000328300 FRMPD2Q68DX3 1309 aaPredicted RBP12.63□□□□□ -0.39
COL4A5-201ENST00000328300 FERP16591 822 aa12.63□□□□□ -0.39
COL4A5-201ENST00000328300 COPB2P35606 906 aa12.63□□□□□ -0.39
COL4A5-201ENST00000328300 RIC8AQ9NPQ8 531 aa12.63□□□□□ -0.39
COL4A5-201ENST00000328300 CNTNAP4Q9C0A0 1308 aa12.63□□□□□ -0.39
COL4A5-201ENST00000328300 MRFAP1L1Q96HT8 127 aa12.63□□□□□ -0.39
COL4A5-201ENST00000328300 DHTKD1Q96HY7 919 aaPredicted RBP12.63□□□□□ -0.39
COL4A5-201ENST00000328300 MINPP1Q9UNW1 487 aa12.63□□□□□ -0.39
COL4A5-201ENST00000328300 PNPLA7Q6ZV29 1317 aa12.63□□□□□ -0.39
COL4A5-201ENST00000328300 STK10O94804 968 aaKnown RBP12.63□□□□□ -0.39
COL4A5-201ENST00000328300 PNMA3Q9UL41 463 aa12.63□□□□□ -0.39
COL4A5-201ENST00000328300 ACTN4O43707 911 aaKnown RBP12.63□□□□□ -0.39
COL4A5-201ENST00000328300 STAT2P52630 851 aa12.63□□□□□ -0.39
COL4A5-201ENST00000328300 PSMD2Q13200 908 aa12.63□□□□□ -0.39
COL4A5-201ENST00000328300 GADL1Q6ZQY3 521 aa12.63□□□□□ -0.39
COL4A5-201ENST00000328300 ADPGKQ9BRR6 497 aa12.63□□□□□ -0.39
COL4A5-201ENST00000328300 PNMA6FA0A0J9YX94 578 aa12.63□□□□□ -0.39
COL4A5-201ENST00000328300 ASNSP08243 561 aa12.63□□□□□ -0.39
COL4A5-201ENST00000328300 GRM1Q13255 1194 aa12.63□□□□□ -0.39
COL4A5-201ENST00000328300 HLFQ16534 295 aa12.63□□□□□ -0.39
COL4A5-201ENST00000328300 CDC37Q16543 378 aaPredicted RBP12.63□□□□□ -0.39
COL4A5-201ENST00000328300 SPATA1Q5VX52 437 aa12.63□□□□□ -0.39
COL4A5-201ENST00000328300 ZNF589Q86UQ0 364 aaPredicted RBP12.63□□□□□ -0.39
COL4A5-201ENST00000328300 ERO1AQ96HE7 468 aa12.63□□□□□ -0.39
COL4A5-201ENST00000328300 PCDHA7Q9UN72 937 aa12.63□□□□□ -0.39
COL4A5-201ENST00000328300 POLR1AO95602 1720 aaPredicted RBP12.62□□□□□ -0.39
COL4A5-201ENST00000328300 CCND2P30279 289 aa12.62□□□□□ -0.39
COL4A5-201ENST00000328300 KRT222Q8N1A0 295 aa12.62□□□□□ -0.39
COL4A5-201ENST00000328300 PUS7LQ9H0K6 701 aaKnown RBP12.62□□□□□ -0.39
COL4A5-201ENST00000328300 RBSNQ9H1K0 784 aa12.62□□□□□ -0.39
COL4A5-201ENST00000328300 FBXO40Q9UH90 709 aa12.62□□□□□ -0.39
COL4A5-201ENST00000328300 TESPA1A2RU30 521 aaPredicted RBP12.62□□□□□ -0.39
COL4A5-201ENST00000328300 XPOTO43592 962 aaKnown RBP12.62□□□□□ -0.39
COL4A5-201ENST00000328300 RCSD1Q6JBY9 416 aa12.62□□□□□ -0.39
COL4A5-201ENST00000328300 RASEFQ8IZ41 740 aa12.62□□□□□ -0.39
COL4A5-201ENST00000328300 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.62□□□□□ -0.39
COL4A5-201ENST00000328300 PANK4Q9NVE7 773 aa12.62□□□□□ -0.39
COL4A5-201ENST00000328300 FAM184BQ9ULE4 1060 aa12.62□□□□□ -0.39
COL4A5-201ENST00000328300 BTBD18B2RXH4 712 aa12.62□□□□□ -0.39
COL4A5-201ENST00000328300 DYMQ7RTS9 669 aa12.62□□□□□ -0.39
COL4A5-201ENST00000328300 BCCIPQ9P287 314 aaKnown RBP eCLIP12.62□□□□□ -0.39
COL4A5-201ENST00000328300 SPOPO43791 374 aa12.62□□□□□ -0.39
COL4A5-201ENST00000328300 DMP1Q13316 513 aaPredicted RBP12.62□□□□□ -0.39
COL4A5-201ENST00000328300 SF3B3Q15393 1217 aaKnown RBP12.62□□□□□ -0.39
COL4A5-201ENST00000328300 RNF187Q5TA31 235 aaPredicted RBP12.62□□□□□ -0.39
COL4A5-201ENST00000328300 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.62□□□□□ -0.39
COL4A5-201ENST00000328300 USP17L8P0C7I0 530 aa12.62□□□□□ -0.39
COL4A5-201ENST00000328300 MCAMP43121 646 aa12.62□□□□□ -0.39
COL4A5-201ENST00000328300 DYNLL1P63167 89 aaKnown RBP12.62□□□□□ -0.39
COL4A5-201ENST00000328300 KIF23Q02241 960 aaPredicted RBP12.62□□□□□ -0.39
COL4A5-201ENST00000328300 KLHL30Q0D2K2 578 aa12.62□□□□□ -0.39
COL4A5-201ENST00000328300 FAM26FQ5R3K3 315 aa12.62□□□□□ -0.39
COL4A5-201ENST00000328300 COMMD10Q9Y6G5 202 aa12.62□□□□□ -0.39
COL4A5-201ENST00000328300 DDX39AO00148 427 aaKnown RBP12.61□□□□□ -0.39
COL4A5-201ENST00000328300 TNNC2P02585 160 aa12.61□□□□□ -0.39
COL4A5-201ENST00000328300 RPN1P04843 607 aaKnown RBP12.61□□□□□ -0.39
COL4A5-201ENST00000328300 ANTXR1Q9H6X2 564 aa12.61□□□□□ -0.39
COL4A5-201ENST00000328300 FEZ2Q9UHY8 353 aaPredicted RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms