RNA–Protein interactions for RNA: ENST00000325404.2

SOX2-201, Transcript of SRY-box 2, humanhuman

APPRIS P1 BASIC

Gene SOX2, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-201ENST00000325404 GRM4Q14833 912 aa22.37■■□□□ 1.17
SOX2-201ENST00000325404 NOC3LQ8WTT2 800 aaKnown RBP22.37■■□□□ 1.17
SOX2-201ENST00000325404 THAP9Q9H5L6 903 aa22.37■■□□□ 1.17
SOX2-201ENST00000325404 MAGEF1Q9HAY2 307 aa22.37■■□□□ 1.17
SOX2-201ENST00000325404 LEMD3Q9Y2U8 911 aa22.37■■□□□ 1.17
SOX2-201ENST00000325404 ROBO3Q96MS0 1386 aa22.37■■□□□ 1.17
SOX2-201ENST00000325404 PRPHP41219 470 aa22.36■■□□□ 1.17
SOX2-201ENST00000325404 ARHGAP25P42331 645 aa22.36■■□□□ 1.17
SOX2-201ENST00000325404 LONRF2Q1L5Z9 754 aa22.36■■□□□ 1.17
SOX2-201ENST00000325404 KIF4BQ2VIQ3 1234 aa22.36■■□□□ 1.17
SOX2-201ENST00000325404 CCDC148Q8NFR7 591 aa22.36■■□□□ 1.17
SOX2-201ENST00000325404 NUP88Q99567 741 aaPredicted RBP22.36■■□□□ 1.17
SOX2-201ENST00000325404 VPS16Q9H269 839 aa22.36■■□□□ 1.17
SOX2-201ENST00000325404 CUEDC2Q9H467 287 aa22.36■■□□□ 1.17
SOX2-201ENST00000325404 PRCPP42785 496 aa22.36■■□□□ 1.17
SOX2-201ENST00000325404 DTHD1Q6ZMT9 781 aa22.36■■□□□ 1.17
SOX2-201ENST00000325404 ZNF662Q6ZS27 426 aa22.36■■□□□ 1.17
SOX2-201ENST00000325404 RBM17Q96I25 401 aaKnown RBP22.36■■□□□ 1.17
SOX2-201ENST00000325404 MKRN1Q9UHC7 482 aaKnown RBP22.36■■□□□ 1.17
SOX2-201ENST00000325404 MYH13Q9UKX3 1938 aa22.36■■□□□ 1.17
SOX2-201ENST00000325404 SLC35F6Q8N357 371 aa22.35■■□□□ 1.17
SOX2-201ENST00000325404 AKT1S1Q96B36 256 aa22.35■■□□□ 1.17
SOX2-201ENST00000325404 ANKZF1Q9H8Y5 726 aa22.35■■□□□ 1.17
SOX2-201ENST00000325404 TAB2Q9NYJ8 693 aa22.35■■□□□ 1.17
SOX2-201ENST00000325404 CALCOCO1Q9P1Z2 691 aa22.35■■□□□ 1.17
SOX2-201ENST00000325404 KRT9P35527 623 aa22.35■■□□□ 1.17
SOX2-201ENST00000325404 STIM1Q13586 685 aa22.35■■□□□ 1.17
SOX2-201ENST00000325404 C12orf60Q5U649 245 aa22.35■■□□□ 1.17
SOX2-201ENST00000325404 IRF2BP1Q8IU81 584 aa22.35■■□□□ 1.17
SOX2-201ENST00000325404 LZTS2Q9BRK4 669 aa22.35■■□□□ 1.17
SOX2-201ENST00000325404 LGALS16A8MUM7 142 aa22.34■■□□□ 1.17
SOX2-201ENST00000325404 ERLIN1O75477 346 aa22.34■■□□□ 1.17
SOX2-201ENST00000325404 RHOBTB3O94955 611 aa22.34■■□□□ 1.17
SOX2-201ENST00000325404 PARP1P09874 1014 aaKnown RBP22.34■■□□□ 1.17
SOX2-201ENST00000325404 CYP2D6P10635 497 aa22.34■■□□□ 1.17
SOX2-201ENST00000325404 OR8K1Q8NGG5 319 aa22.34■■□□□ 1.17
SOX2-201ENST00000325404 DNAJC7Q99615 494 aa22.34■■□□□ 1.17
SOX2-201ENST00000325404 CCDC88AQ3V6T2 1871 aa22.34■■□□□ 1.17
SOX2-201ENST00000325404 IRS2Q9Y4H2 1338 aa22.34■■□□□ 1.17
SOX2-201ENST00000325404 VEGFAP15692 232 aaPredicted RBP22.34■■□□□ 1.17
SOX2-201ENST00000325404 NAALADL2Q58DX5 795 aa22.34■■□□□ 1.17
SOX2-201ENST00000325404 TXNRD3Q86VQ6 643 aa22.34■■□□□ 1.17
SOX2-201ENST00000325404 MB21D1Q8N884 522 aa22.34■■□□□ 1.17
SOX2-201ENST00000325404 PNMA1Q8ND90 353 aa22.34■■□□□ 1.17
SOX2-201ENST00000325404 ACRBPQ8NEB7 543 aa22.34■■□□□ 1.17
SOX2-201ENST00000325404 ZNF507Q8TCN5 953 aa22.34■■□□□ 1.17
SOX2-201ENST00000325404 KBTBD4Q9NVX7 518 aa22.34■■□□□ 1.17
SOX2-201ENST00000325404 CCDC194A0A1B0GVG4 234 aa22.33■■□□□ 1.17
SOX2-201ENST00000325404 UBXN1Q04323 297 aa22.33■■□□□ 1.17
SOX2-201ENST00000325404 EPN1Q9Y6I3 576 aaPredicted RBP22.33■■□□□ 1.17
SOX2-201ENST00000325404 FAM205AQ6ZU69 1335 aa22.33■■□□□ 1.17
SOX2-201ENST00000325404 A0A0U1RQJ8 604 aa22.33■■□□□ 1.17
SOX2-201ENST00000325404 RNF225M0QZC1 329 aaPredicted RBP22.33■■□□□ 1.17
SOX2-201ENST00000325404 OAS2P29728 719 aaKnown RBP22.33■■□□□ 1.17
SOX2-201ENST00000325404 PRDX5P30044 214 aa22.33■■□□□ 1.17
SOX2-201ENST00000325404 TFAP4Q01664 338 aa22.33■■□□□ 1.17
SOX2-201ENST00000325404 EVX2Q03828 476 aa22.33■■□□□ 1.17
SOX2-201ENST00000325404 NLGN1Q8N2Q7 840 aa22.33■■□□□ 1.17
SOX2-201ENST00000325404 GIMAP8Q8ND71 665 aaPredicted RBP22.33■■□□□ 1.17
SOX2-201ENST00000325404 ATRIPQ8WXE1 791 aa22.33■■□□□ 1.17
SOX2-201ENST00000325404 AK8Q96MA6 479 aa22.33■■□□□ 1.17
SOX2-201ENST00000325404 GBP3Q9H0R5 595 aa22.33■■□□□ 1.17
SOX2-201ENST00000325404 IL17RBQ9NRM6 502 aa22.33■■□□□ 1.17
SOX2-201ENST00000325404 MCM9Q9NXL9 1143 aa22.33■■□□□ 1.17
SOX2-201ENST00000325404 GDAQ9Y2T3 454 aa22.33■■□□□ 1.17
SOX2-201ENST00000325404 ADAMTS3O15072 1205 aa22.32■■□□□ 1.16
SOX2-201ENST00000325404 PPP1R2P41236 205 aa22.32■■□□□ 1.16
SOX2-201ENST00000325404 BEND6Q5SZJ8 279 aaPredicted RBP22.32■■□□□ 1.16
SOX2-201ENST00000325404 FLAD1Q8NFF5 587 aa22.32■■□□□ 1.16
SOX2-201ENST00000325404 DHTKD1Q96HY7 919 aaPredicted RBP22.32■■□□□ 1.16
SOX2-201ENST00000325404 CAPN11Q9UMQ6 739 aa22.32■■□□□ 1.16
SOX2-201ENST00000325404 PCDHA6Q9UN73 950 aa22.32■■□□□ 1.16
SOX2-201ENST00000325404 PCDHA8Q9Y5H6 950 aa22.32■■□□□ 1.16
SOX2-201ENST00000325404 KLRC4O43908 158 aa22.32■■□□□ 1.16
SOX2-201ENST00000325404 AMPD2Q01433 879 aa22.32■■□□□ 1.16
SOX2-201ENST00000325404 GPS2Q13227 327 aa22.32■■□□□ 1.16
SOX2-201ENST00000325404 COL23A1Q86Y22 540 aaPredicted RBP22.32■■□□□ 1.16
SOX2-201ENST00000325404 HAUS4Q9H6D7 363 aa22.32■■□□□ 1.16
SOX2-201ENST00000325404 PSD3Q9NYI0 1048 aa22.32■■□□□ 1.16
SOX2-201ENST00000325404 MAD2L2Q9UI95 211 aa22.32■■□□□ 1.16
SOX2-201ENST00000325404 CTAGE15A4D2H0 777 aa22.31■■□□□ 1.16
SOX2-201ENST00000325404 PSMA7O14818 248 aa22.31■■□□□ 1.16
SOX2-201ENST00000325404 NDUFA10O95299 355 aa22.31■■□□□ 1.16
SOX2-201ENST00000325404 CTAGE8P0CG41 777 aa22.31■■□□□ 1.16
SOX2-201ENST00000325404 HOXA10P31260 410 aaPredicted RBP22.31■■□□□ 1.16
SOX2-201ENST00000325404 HDXQ7Z353 690 aa22.31■■□□□ 1.16
SOX2-201ENST00000325404 CTAGE6Q86UF2 777 aa22.31■■□□□ 1.16
SOX2-201ENST00000325404 CTAGE4Q8IX94 777 aa22.31■■□□□ 1.16
SOX2-201ENST00000325404 TXLNBQ8N3L3 684 aa22.31■■□□□ 1.16
SOX2-201ENST00000325404 BARHL2Q9NY43 387 aa22.31■■□□□ 1.16
SOX2-201ENST00000325404 LUC7L2Q9Y383 392 aaKnown RBP22.31■■□□□ 1.16
SOX2-201ENST00000325404 BBOX1O75936 387 aa22.31■■□□□ 1.16
SOX2-201ENST00000325404 UBA7P41226 1012 aa22.31■■□□□ 1.16
SOX2-201ENST00000325404 DNM2P50570 870 aa22.31■■□□□ 1.16
SOX2-201ENST00000325404 SLC51AQ86UW1 340 aa22.31■■□□□ 1.16
SOX2-201ENST00000325404 RETREG2Q8NC44 543 aa22.31■■□□□ 1.16
SOX2-201ENST00000325404 PUF60Q9UHX1 559 aaKnown RBP22.31■■□□□ 1.16
SOX2-201ENST00000325404 PSMD14O00487 310 aa22.3■■□□□ 1.16
SOX2-201ENST00000325404 NUP58Q9BVL2 599 aa22.3■■□□□ 1.16
SOX2-201ENST00000325404 KLRG2A4D1S0 409 aaPredicted RBP22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms