RNA–Protein interactions for RNA: ENST00000324771.12

DDR1-223, Transcript of discoidin domain receptor tyrosine kinase 1, human

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-223	ENST00000324771	DNM3	Q9UQ16	869 aa		13.2	□□□□□ -0.3
DDR1-223	ENST00000324771	FER1L4	A9Z1Z3	1794 aa		13.2	□□□□□ -0.3
DDR1-223	ENST00000324771	TTLL1	O95922	423 aa		13.2	□□□□□ -0.3
DDR1-223	ENST00000324771	GH2	P01242	217 aa		13.2	□□□□□ -0.3
DDR1-223	ENST00000324771	SLFN14	P0C7P3	912 aa		13.2	□□□□□ -0.3
DDR1-223	ENST00000324771	PTPRE	P23469	700 aa		13.2	□□□□□ -0.3
DDR1-223	ENST00000324771	RRAGA	Q7L523	313 aa		13.2	□□□□□ -0.3
DDR1-223	ENST00000324771	GINS2	Q9Y248	185 aa		13.2	□□□□□ -0.3
DDR1-223	ENST00000324771	SRPRB	Q9Y5M8	271 aa	Known RBP	13.2	□□□□□ -0.3
DDR1-223	ENST00000324771	SLIT1	O75093	1534 aa		13.2	□□□□□ -0.3
DDR1-223	ENST00000324771	NCOA3	Q9Y6Q9	1424 aa		13.2	□□□□□ -0.3
DDR1-223	ENST00000324771	TXLNB	Q8N3L3	684 aa		13.2	□□□□□ -0.3
DDR1-223	ENST00000324771	ARFGAP3	Q9NP61	516 aa		13.2	□□□□□ -0.3
DDR1-223	ENST00000324771	KRT13	P13646	458 aa		13.2	□□□□□ -0.3
DDR1-223	ENST00000324771	NAA30	Q147X3	362 aa	Predicted RBP	13.2	□□□□□ -0.3
DDR1-223	ENST00000324771	SEPT2	Q15019	361 aa		13.2	□□□□□ -0.3
DDR1-223	ENST00000324771	ALX1	Q15699	326 aa		13.2	□□□□□ -0.3
DDR1-223	ENST00000324771	VPS72	Q15906	364 aa		13.2	□□□□□ -0.3
DDR1-223	ENST00000324771	MRPL44	Q9H9J2	332 aa	Known RBP	13.2	□□□□□ -0.3
DDR1-223	ENST00000324771	AKR1B1	P15121	316 aa		13.19	□□□□□ -0.3
DDR1-223	ENST00000324771	CUL4B	Q13620	913 aa		13.19	□□□□□ -0.3
DDR1-223	ENST00000324771	STXBP4	Q6ZWJ1	553 aa		13.19	□□□□□ -0.3
DDR1-223	ENST00000324771	DPH6	Q7L8W6	267 aa		13.19	□□□□□ -0.3
DDR1-223	ENST00000324771	SGMS1	Q86VZ5	419 aa		13.19	□□□□□ -0.3
DDR1-223	ENST00000324771	TESPA1	A2RU30	521 aa	Predicted RBP	13.19	□□□□□ -0.3
DDR1-223	ENST00000324771	CCDC66	A2RUB6	948 aa		13.19	□□□□□ -0.3
DDR1-223	ENST00000324771	POTEM	A6NI47	508 aa		13.19	□□□□□ -0.3
DDR1-223	ENST00000324771	CETN3	O15182	167 aa		13.19	□□□□□ -0.3
DDR1-223	ENST00000324771	GTPBP6	O43824	516 aa	Predicted RBP	13.19	□□□□□ -0.3
DDR1-223	ENST00000324771	SPATA1	Q5VX52	437 aa		13.19	□□□□□ -0.3
DDR1-223	ENST00000324771	IQCE	Q6IPM2	695 aa		13.19	□□□□□ -0.3
DDR1-223	ENST00000324771	TTBK2	Q6IQ55	1244 aa		13.19	□□□□□ -0.3
DDR1-223	ENST00000324771	LEKR1	Q6ZMV7	388 aa		13.19	□□□□□ -0.3
DDR1-223	ENST00000324771	PAGE5	Q96GU1	130 aa		13.19	□□□□□ -0.3
DDR1-223	ENST00000324771	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	13.19	□□□□□ -0.3
DDR1-223	ENST00000324771	TACC1	O75410	805 aa		13.19	□□□□□ -0.3
DDR1-223	ENST00000324771	PLCG1	P19174	1290 aa		13.19	□□□□□ -0.3
DDR1-223	ENST00000324771	DGKH	Q86XP1	1220 aa		13.19	□□□□□ -0.3
DDR1-223	ENST00000324771	GJA10	Q969M2	543 aa		13.19	□□□□□ -0.3
DDR1-223	ENST00000324771	ABCC12	Q96J65	1359 aa		13.18	□□□□□ -0.3
DDR1-223	ENST00000324771	ARHGEF35	A5YM69	484 aa		13.18	□□□□□ -0.3
DDR1-223	ENST00000324771	TRIM49B	A6NDI0	452 aa		13.18	□□□□□ -0.3
DDR1-223	ENST00000324771		B4DLN1	442 aa		13.18	□□□□□ -0.3
DDR1-223	ENST00000324771	DNAJC21	Q5F1R6	531 aa	Known RBP	13.18	□□□□□ -0.3
DDR1-223	ENST00000324771	PPP4R3A	Q6IN85	833 aa		13.18	□□□□□ -0.3
DDR1-223	ENST00000324771	TBC1D16	Q8TBP0	767 aa		13.18	□□□□□ -0.3
DDR1-223	ENST00000324771	IMPACT	Q9P2X3	320 aa		13.18	□□□□□ -0.3
DDR1-223	ENST00000324771	GOLGA6L10	A6NI86	522 aa		13.18	□□□□□ -0.3
DDR1-223	ENST00000324771	KRT83	P78385	493 aa		13.18	□□□□□ -0.3
DDR1-223	ENST00000324771	PPP2R3A	Q06190	1150 aa		13.18	□□□□□ -0.3
DDR1-223	ENST00000324771	PICK1	Q9NRD5	415 aa		13.18	□□□□□ -0.3
DDR1-223	ENST00000324771	USP17L10	C9JJH3	530 aa		13.18	□□□□□ -0.3
DDR1-223	ENST00000324771	GAS7	O60861	476 aa		13.18	□□□□□ -0.3
DDR1-223	ENST00000324771	PC	P11498	1178 aa	Known RBP	13.18	□□□□□ -0.3
DDR1-223	ENST00000324771	CRK	P46108	304 aa		13.18	□□□□□ -0.3
DDR1-223	ENST00000324771	HAUS3	Q68CZ6	603 aa		13.18	□□□□□ -0.3
DDR1-223	ENST00000324771	CERS3	Q8IU89	383 aa		13.18	□□□□□ -0.3
DDR1-223	ENST00000324771	TSPYL1	Q9H0U9	437 aa		13.18	□□□□□ -0.3
DDR1-223	ENST00000324771	ZNF277	Q9NRM2	450 aa	Predicted RBP	13.18	□□□□□ -0.3
DDR1-223	ENST00000324771	NPR1	P16066	1061 aa		13.17	□□□□□ -0.3
DDR1-223	ENST00000324771	CCDC84	Q86UT8	332 aa	Predicted RBP	13.17	□□□□□ -0.3
DDR1-223	ENST00000324771	FLOT1	O75955	427 aa		13.17	□□□□□ -0.3
DDR1-223	ENST00000324771	CYP2J2	P51589	502 aa		13.17	□□□□□ -0.3
DDR1-223	ENST00000324771	BMS1	Q14692	1282 aa	Known RBP	13.17	□□□□□ -0.3
DDR1-223	ENST00000324771	SMAP1	Q8IYB5	467 aa	Predicted RBP	13.17	□□□□□ -0.3
DDR1-223	ENST00000324771	HPS3	Q969F9	1004 aa		13.17	□□□□□ -0.3
DDR1-223	ENST00000324771	COA1	Q9GZY4	146 aa		13.17	□□□□□ -0.3
DDR1-223	ENST00000324771	FAM107B	Q9H098	131 aa		13.17	□□□□□ -0.3
DDR1-223	ENST00000324771	PPP2R2C	Q9Y2T4	447 aa		13.17	□□□□□ -0.3
DDR1-223	ENST00000324771	ZBTB12	Q9Y330	459 aa	Predicted RBP	13.17	□□□□□ -0.3
DDR1-223	ENST00000324771	LMAN1	P49257	510 aa		13.17	□□□□□ -0.3
DDR1-223	ENST00000324771	C12orf60	Q5U649	245 aa		13.17	□□□□□ -0.3
DDR1-223	ENST00000324771	CNKSR2	Q8WXI2	1034 aa		13.17	□□□□□ -0.3
DDR1-223	ENST00000324771	SFI1	A8K8P3	1242 aa		13.16	□□□□□ -0.3
DDR1-223	ENST00000324771	MAGEA1	P43355	309 aa		13.16	□□□□□ -0.3
DDR1-223	ENST00000324771	TRAF1	Q13077	416 aa		13.16	□□□□□ -0.3
DDR1-223	ENST00000324771	ARHGAP44	Q17R89	818 aa		13.16	□□□□□ -0.3
DDR1-223	ENST00000324771	RESP18	Q5W5W9	173 aa		13.16	□□□□□ -0.3
DDR1-223	ENST00000324771	CC2D2B	Q6DHV5	1058 aa		13.16	□□□□□ -0.3
DDR1-223	ENST00000324771	RASGRP2	Q7LDG7	609 aa		13.16	□□□□□ -0.3
DDR1-223	ENST00000324771	FLAD1	Q8NFF5	587 aa		13.16	□□□□□ -0.3
DDR1-223	ENST00000324771	IFT81	Q8WYA0	676 aa		13.16	□□□□□ -0.3
DDR1-223	ENST00000324771	DPF2	Q92785	391 aa		13.16	□□□□□ -0.3
DDR1-223	ENST00000324771	COL5A2	P05997	1499 aa	Predicted RBP	13.16	□□□□□ -0.3
DDR1-223	ENST00000324771	USP27X	A6NNY8	438 aa		13.16	□□□□□ -0.3
DDR1-223	ENST00000324771	ENC1	O14682	589 aa		13.16	□□□□□ -0.3
DDR1-223	ENST00000324771	LONP1	P36776	959 aa	Known RBP	13.16	□□□□□ -0.3
DDR1-223	ENST00000324771	RBL2	Q08999	1139 aa		13.16	□□□□□ -0.3
DDR1-223	ENST00000324771	PDLIM2	Q96JY6	352 aa		13.16	□□□□□ -0.3
DDR1-223	ENST00000324771	GSDMA	Q96QA5	445 aa		13.16	□□□□□ -0.3
DDR1-223	ENST00000324771	MROH7-TTC4	A0A0A0MT08	1334 aa		13.16	□□□□□ -0.3
DDR1-223	ENST00000324771	PNPLA7	Q6ZV29	1317 aa		13.16	□□□□□ -0.3
DDR1-223	ENST00000324771	COPB1	P53618	953 aa	Known RBP	13.16	□□□□□ -0.3
DDR1-223	ENST00000324771	ETF1	P62495	437 aa	Known RBP	13.16	□□□□□ -0.3
DDR1-223	ENST00000324771	EVX2	Q03828	476 aa		13.16	□□□□□ -0.3
DDR1-223	ENST00000324771	CYP26C1	Q6V0L0	522 aa		13.16	□□□□□ -0.3
DDR1-223	ENST00000324771	SMCR8	Q8TEV9	937 aa	Predicted RBP	13.16	□□□□□ -0.3
DDR1-223	ENST00000324771	GOLGA1	Q92805	767 aa		13.16	□□□□□ -0.3
DDR1-223	ENST00000324771	MASTL	Q96GX5	879 aa		13.16	□□□□□ -0.3
DDR1-223	ENST00000324771	PAGR1	Q9BTK6	254 aa		13.16	□□□□□ -0.3

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