RNA–Protein interactions for RNA: ENST00000324444.7

SYNE4-201, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE4, Length 1,354 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-201ENST00000324444 SP3Q02447 781 aa20.75■□□□□ 0.91
SYNE4-201ENST00000324444 NFKBIBQ15653 356 aa20.75■□□□□ 0.91
SYNE4-201ENST00000324444 PKN1Q16512 942 aa20.75■□□□□ 0.91
SYNE4-201ENST00000324444 FOXD4L5Q5VV16 416 aaPredicted RBP20.75■□□□□ 0.91
SYNE4-201ENST00000324444 FAM160B2Q86V87 743 aa20.75■□□□□ 0.91
SYNE4-201ENST00000324444 CD99L2Q8TCZ2 262 aa20.75■□□□□ 0.91
SYNE4-201ENST00000324444 FOXD4L4Q8WXT5 416 aaPredicted RBP20.75■□□□□ 0.91
SYNE4-201ENST00000324444 ZNF396Q96N95 335 aaPredicted RBP20.75■□□□□ 0.91
SYNE4-201ENST00000324444 FOXP1Q9H334 677 aaPredicted RBP20.75■□□□□ 0.91
SYNE4-201ENST00000324444 GPCPD1Q9NPB8 672 aa20.75■□□□□ 0.91
SYNE4-201ENST00000324444 CFAP45Q9UL16 551 aa20.75■□□□□ 0.91
SYNE4-201ENST00000324444 FRMPD2Q68DX3 1309 aaPredicted RBP20.75■□□□□ 0.91
SYNE4-201ENST00000324444 C19orf81C9J6K1 198 aa20.74■□□□□ 0.91
SYNE4-201ENST00000324444 USP17L10C9JJH3 530 aa20.74■□□□□ 0.91
SYNE4-201ENST00000324444 PPFIA3O75145 1194 aa20.74■□□□□ 0.91
SYNE4-201ENST00000324444 SOX10P56693 466 aa20.74■□□□□ 0.91
SYNE4-201ENST00000324444 KRT85P78386 507 aa20.74■□□□□ 0.91
SYNE4-201ENST00000324444 RESTQ13127 1097 aa20.74■□□□□ 0.91
SYNE4-201ENST00000324444 BTNL9Q6UXG8 535 aa20.74■□□□□ 0.91
SYNE4-201ENST00000324444 OTOP1Q7RTM1 612 aa20.74■□□□□ 0.91
SYNE4-201ENST00000324444 ZCCHC17Q9NP64 241 aaKnown RBP20.74■□□□□ 0.91
SYNE4-201ENST00000324444 LOC285556D6RIA3 1793 aa20.74■□□□□ 0.91
SYNE4-201ENST00000324444 PNMA6FA0A0J9YX94 578 aa20.73■□□□□ 0.91
SYNE4-201ENST00000324444 RASGRP2Q7LDG7 609 aa20.73■□□□□ 0.91
SYNE4-201ENST00000324444 ZNF280CQ8ND82 737 aa20.73■□□□□ 0.91
SYNE4-201ENST00000324444 BARHL2Q9NY43 387 aa20.73■□□□□ 0.91
SYNE4-201ENST00000324444 KCNH4Q9UQ05 1017 aa20.73■□□□□ 0.91
SYNE4-201ENST00000324444 HTTP42858 3142 aa20.73■□□□□ 0.91
SYNE4-201ENST00000324444 WDR46O15213 610 aaKnown RBP20.72■□□□□ 0.91
SYNE4-201ENST00000324444 CYTH3O43739 400 aa20.72■□□□□ 0.91
SYNE4-201ENST00000324444 NLRP5P59047 1200 aa20.72■□□□□ 0.91
SYNE4-201ENST00000324444 GUCY1B3Q02153 619 aa20.72■□□□□ 0.91
SYNE4-201ENST00000324444 MLLT1Q03111 559 aaPredicted RBP20.72■□□□□ 0.91
SYNE4-201ENST00000324444 IKQ13123 557 aaPredicted RBP20.72■□□□□ 0.91
SYNE4-201ENST00000324444 PPP1R18Q6NYC8 613 aa20.72■□□□□ 0.91
SYNE4-201ENST00000324444 KCTD1Q719H9 257 aa20.72■□□□□ 0.91
SYNE4-201ENST00000324444 FERMT3Q86UX7 667 aa20.72■□□□□ 0.91
SYNE4-201ENST00000324444 TEX2Q8IWB9 1127 aa20.72■□□□□ 0.91
SYNE4-201ENST00000324444 PHF20Q9BVI0 1012 aa20.72■□□□□ 0.91
SYNE4-201ENST00000324444 SCAND2PQ9GZW5 306 aaPredicted RBP20.72■□□□□ 0.91
SYNE4-201ENST00000324444 GLT8D2Q9H1C3 349 aa20.72■□□□□ 0.91
SYNE4-201ENST00000324444 FEM1BQ9UK73 627 aa20.72■□□□□ 0.91
SYNE4-201ENST00000324444 AFG3L2Q9Y4W6 797 aa20.72■□□□□ 0.91
SYNE4-201ENST00000324444 DTNBO60941 627 aa20.72■□□□□ 0.91
SYNE4-201ENST00000324444 U2AF2P26368 475 aaKnown RBP eCLIP20.72■□□□□ 0.91
SYNE4-201ENST00000324444 GNA11P29992 359 aa20.72■□□□□ 0.91
SYNE4-201ENST00000324444 KRT2P35908 639 aa20.72■□□□□ 0.91
SYNE4-201ENST00000324444 STAT2P52630 851 aa20.72■□□□□ 0.91
SYNE4-201ENST00000324444 FOSBP53539 338 aa20.72■□□□□ 0.91
SYNE4-201ENST00000324444 KIAA1755Q5JYT7 1200 aa20.72■□□□□ 0.91
SYNE4-201ENST00000324444 ADGRF4Q8IZF3 695 aa20.72■□□□□ 0.91
SYNE4-201ENST00000324444 BICD2Q8TD16 824 aa20.72■□□□□ 0.91
SYNE4-201ENST00000324444 UBA5Q9GZZ9 404 aa20.72■□□□□ 0.91
SYNE4-201ENST00000324444 PNMA2Q9UL42 364 aa20.72■□□□□ 0.91
SYNE4-201ENST00000324444 ZHX2Q9Y6X8 837 aa20.72■□□□□ 0.91
SYNE4-201ENST00000324444 PARP14Q460N5 1801 aa20.71■□□□□ 0.91
SYNE4-201ENST00000324444 TMEM232C9JQI7 657 aa20.71■□□□□ 0.91
SYNE4-201ENST00000324444 ZBTB5O15062 677 aa20.71■□□□□ 0.91
SYNE4-201ENST00000324444 FDX1P10109 184 aa20.71■□□□□ 0.91
SYNE4-201ENST00000324444 CAP1Q01518 475 aa20.71■□□□□ 0.91
SYNE4-201ENST00000324444 SYDE2Q5VT97 1194 aa20.71■□□□□ 0.91
SYNE4-201ENST00000324444 DIS3L2Q8IYB7 885 aaKnown RBP20.71■□□□□ 0.91
SYNE4-201ENST00000324444 MTMR8Q96EF0 704 aa20.71■□□□□ 0.91
SYNE4-201ENST00000324444 AIFM3Q96NN9 605 aa20.71■□□□□ 0.91
SYNE4-201ENST00000324444 JMJD4Q9H9V9 463 aa20.71■□□□□ 0.91
SYNE4-201ENST00000324444 EFCC1Q9HA90 598 aa20.71■□□□□ 0.91
SYNE4-201ENST00000324444 VAT1LQ9HCJ6 419 aa20.71■□□□□ 0.91
SYNE4-201ENST00000324444 VPS54Q9P1Q0 977 aa20.71■□□□□ 0.91
SYNE4-201ENST00000324444 MYH6P13533 1939 aa20.7■□□□□ 0.9
SYNE4-201ENST00000324444 ESYT2A0FGR8 921 aa20.7■□□□□ 0.9
SYNE4-201ENST00000324444 CXCL11O14625 94 aa20.7■□□□□ 0.9
SYNE4-201ENST00000324444 TLR2O60603 784 aa20.7■□□□□ 0.9
SYNE4-201ENST00000324444 NCLP19338 710 aaKnown RBP20.7■□□□□ 0.9
SYNE4-201ENST00000324444 BACE1P56817 501 aa20.7■□□□□ 0.9
SYNE4-201ENST00000324444 SPP2Q13103 211 aa20.7■□□□□ 0.9
SYNE4-201ENST00000324444 MTMR2Q13614 643 aa20.7■□□□□ 0.9
SYNE4-201ENST00000324444 SKOR2Q2VWA4 1001 aaPredicted RBP20.7■□□□□ 0.9
SYNE4-201ENST00000324444 HEATR3Q7Z4Q2 680 aa20.7■□□□□ 0.9
SYNE4-201ENST00000324444 ANKRD23Q86SG2 305 aa20.7■□□□□ 0.9
SYNE4-201ENST00000324444 HOMER1Q86YM7 354 aa20.7■□□□□ 0.9
SYNE4-201ENST00000324444 C12orf42Q96LP6 360 aa20.7■□□□□ 0.9
SYNE4-201ENST00000324444 PIGSQ96S52 555 aa20.7■□□□□ 0.9
SYNE4-201ENST00000324444 C6orf50Q9HD87 102 aa20.7■□□□□ 0.9
SYNE4-201ENST00000324444 PDHXO00330 501 aa20.69■□□□□ 0.9
SYNE4-201ENST00000324444 MOGSQ13724 837 aa20.69■□□□□ 0.9
SYNE4-201ENST00000324444 SH3D19Q5HYK7 790 aa20.69■□□□□ 0.9
SYNE4-201ENST00000324444 MCTP2Q6DN12 878 aa20.69■□□□□ 0.9
SYNE4-201ENST00000324444 NOSTRINQ8IVI9 506 aa20.69■□□□□ 0.9
SYNE4-201ENST00000324444 DAGLBQ8NCG7 672 aa20.69■□□□□ 0.9
SYNE4-201ENST00000324444 TMOD4Q9NZQ9 345 aa20.69■□□□□ 0.9
SYNE4-201ENST00000324444 PTPN22Q9Y2R2 807 aa20.69■□□□□ 0.9
SYNE4-201ENST00000324444 NAPAP54920 295 aa20.68■□□□□ 0.9
SYNE4-201ENST00000324444 TTBK2Q6IQ55 1244 aa20.68■□□□□ 0.9
SYNE4-201ENST00000324444 PIBF1Q8WXW3 757 aa20.68■□□□□ 0.9
SYNE4-201ENST00000324444 EMILIN3Q9NT22 766 aa20.68■□□□□ 0.9
SYNE4-201ENST00000324444 NOL7Q9UMY1 257 aaKnown RBP20.68■□□□□ 0.9
SYNE4-201ENST00000324444 PCDHA4Q9UN74 947 aa20.68■□□□□ 0.9
SYNE4-201ENST00000324444 RLFQ13129 1914 aa20.67■□□□□ 0.9
SYNE4-201ENST00000324444 BAZ2BQ9UIF8 2168 aaKnown RBP20.67■□□□□ 0.9
SYNE4-201ENST00000324444 A0A0G2JLL6 359 aaPredicted RBP20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms