RNA–Protein interactions for RNA: ENST00000323144.11

TPM3-204, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-204ENST00000323144 CCDC174Q6PII3 467 aa14.64□□□□□ -0.07
TPM3-204ENST00000323144 DDX11Q96FC9 970 aa14.64□□□□□ -0.07
TPM3-204ENST00000323144 AGBL1Q96MI9 1066 aa14.64□□□□□ -0.07
TPM3-204ENST00000323144 A1CFQ9NQ94 594 aaKnown RBP14.64□□□□□ -0.07
TPM3-204ENST00000323144 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.64□□□□□ -0.07
TPM3-204ENST00000323144 ANAPC4Q9UJX5 808 aa14.64□□□□□ -0.07
TPM3-204ENST00000323144 NEDD4P46934 1319 aa14.64□□□□□ -0.07
TPM3-204ENST00000323144 TANC1Q9C0D5 1861 aa14.63□□□□□ -0.07
TPM3-204ENST00000323144 TRIM43BA6NCK2 446 aa14.63□□□□□ -0.07
TPM3-204ENST00000323144 ORC4O43929 436 aa14.63□□□□□ -0.07
TPM3-204ENST00000323144 RANBP6O60518 1105 aaKnown RBP14.63□□□□□ -0.07
TPM3-204ENST00000323144 SLC1A4P43007 532 aa14.63□□□□□ -0.07
TPM3-204ENST00000323144 OAZ1P54368 228 aa14.63□□□□□ -0.07
TPM3-204ENST00000323144 CCDC96Q2M329 555 aa14.63□□□□□ -0.07
TPM3-204ENST00000323144 RRP12Q5JTH9 1297 aaKnown RBP14.63□□□□□ -0.07
TPM3-204ENST00000323144 C9orf50Q5SZB4 431 aa14.63□□□□□ -0.07
TPM3-204ENST00000323144 B4GALNT3Q6L9W6 998 aa14.63□□□□□ -0.07
TPM3-204ENST00000323144 MAMDC4Q6UXC1 1216 aa14.63□□□□□ -0.07
TPM3-204ENST00000323144 ARMCX2Q7L311 632 aa14.63□□□□□ -0.07
TPM3-204ENST00000323144 SMC5Q8IY18 1101 aa14.63□□□□□ -0.07
TPM3-204ENST00000323144 ANKRD35Q8N283 1001 aa14.63□□□□□ -0.07
TPM3-204ENST00000323144 DEFB123Q8N688 67 aa14.63□□□□□ -0.07
TPM3-204ENST00000323144 EXOC6Q8TAG9 804 aa14.63□□□□□ -0.07
TPM3-204ENST00000323144 TRIM43Q96BQ3 446 aaPredicted RBP14.63□□□□□ -0.07
TPM3-204ENST00000323144 LBHD1Q9BQE6 289 aaPredicted RBP14.63□□□□□ -0.07
TPM3-204ENST00000323144 KATNBL1Q9H079 304 aa14.63□□□□□ -0.07
TPM3-204ENST00000323144 ACAD9Q9H845 621 aa14.63□□□□□ -0.07
TPM3-204ENST00000323144 HELLSQ9NRZ9 838 aa14.63□□□□□ -0.07
TPM3-204ENST00000323144 FRMPD2Q68DX3 1309 aaPredicted RBP14.63□□□□□ -0.07
TPM3-204ENST00000323144 TRIM6-TRIM34B2RNG4 842 aa14.62□□□□□ -0.07
TPM3-204ENST00000323144 PQBP1O60828 265 aaKnown RBP14.62□□□□□ -0.07
TPM3-204ENST00000323144 ITGB8P26012 769 aa14.62□□□□□ -0.07
TPM3-204ENST00000323144 TLE2Q04725 743 aa14.62□□□□□ -0.07
TPM3-204ENST00000323144 MUM1L1Q5H9M0 696 aa14.62□□□□□ -0.07
TPM3-204ENST00000323144 ZNF467Q7Z7K2 595 aaPredicted RBP14.62□□□□□ -0.07
TPM3-204ENST00000323144 RNF180Q86T96 592 aa14.62□□□□□ -0.07
TPM3-204ENST00000323144 FAM160B2Q86V87 743 aa14.62□□□□□ -0.07
TPM3-204ENST00000323144 MSL3Q8N5Y2 521 aaKnown RBP14.62□□□□□ -0.07
TPM3-204ENST00000323144 CHST13Q8NET6 341 aa14.62□□□□□ -0.07
TPM3-204ENST00000323144 BADQ92934 168 aa14.62□□□□□ -0.07
TPM3-204ENST00000323144 TOMM22Q9NS69 142 aa14.62□□□□□ -0.07
TPM3-204ENST00000323144 PRKAG2Q9UGJ0 569 aa14.62□□□□□ -0.07
TPM3-204ENST00000323144 PRR12Q9ULL5 1215 aa14.62□□□□□ -0.07
TPM3-204ENST00000323144 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.61□□□□□ -0.07
TPM3-204ENST00000323144 SOWAHBA6NEL2 793 aa14.61□□□□□ -0.07
TPM3-204ENST00000323144 IGHDP01880 384 aa14.61□□□□□ -0.07
TPM3-204ENST00000323144 HSPD1P10809 573 aaKnown RBP14.61□□□□□ -0.07
TPM3-204ENST00000323144 ALAS1P13196 640 aa14.61□□□□□ -0.07
TPM3-204ENST00000323144 NOVP48745 357 aa14.61□□□□□ -0.07
TPM3-204ENST00000323144 ACLYP53396 1101 aa14.61□□□□□ -0.07
TPM3-204ENST00000323144 ALX1Q15699 326 aa14.61□□□□□ -0.07
TPM3-204ENST00000323144 MCMDC2Q4G0Z9 681 aa14.61□□□□□ -0.07
TPM3-204ENST00000323144 TTBK2Q6IQ55 1244 aa14.61□□□□□ -0.07
TPM3-204ENST00000323144 CCDC144CPQ8IYA2 1237 aa14.61□□□□□ -0.07
TPM3-204ENST00000323144 FAM133AQ8N9E0 248 aa14.61□□□□□ -0.07
TPM3-204ENST00000323144 STAG1Q8WVM7 1258 aa14.61□□□□□ -0.07
TPM3-204ENST00000323144 RILPL2Q969X0 211 aa14.61□□□□□ -0.07
TPM3-204ENST00000323144 FBXO40Q9UH90 709 aa14.61□□□□□ -0.07
TPM3-204ENST00000323144 EYSQ5T1H1 3165 aa14.61□□□□□ -0.07
TPM3-204ENST00000323144 FGAP02671 866 aa14.6□□□□□ -0.07
TPM3-204ENST00000323144 CLTBP09497 229 aa14.6□□□□□ -0.07
TPM3-204ENST00000323144 FGRP09769 529 aa14.6□□□□□ -0.07
TPM3-204ENST00000323144 SLC16A2P36021 539 aa14.6□□□□□ -0.07
TPM3-204ENST00000323144 ACVR2BQ13705 512 aa14.6□□□□□ -0.07
TPM3-204ENST00000323144 CCDC144BQ3MJ40 725 aa14.6□□□□□ -0.07
TPM3-204ENST00000323144 C1orf53Q5VUE5 145 aa14.6□□□□□ -0.07
TPM3-204ENST00000323144 CCSAPQ6IQ19 270 aaPredicted RBP14.6□□□□□ -0.07
TPM3-204ENST00000323144 KLHDC9Q8NEP7 349 aa14.6□□□□□ -0.07
TPM3-204ENST00000323144 PURBQ96QR8 312 aaKnown RBP14.6□□□□□ -0.07
TPM3-204ENST00000323144 FAM184BQ9ULE4 1060 aa14.6□□□□□ -0.07
TPM3-204ENST00000323144 POTEB2H3BUK9 544 aa14.59□□□□□ -0.07
TPM3-204ENST00000323144 CTAGE5O15320 804 aa14.59□□□□□ -0.07
TPM3-204ENST00000323144 C6orf222P0C671 652 aaPredicted RBP14.59□□□□□ -0.07
TPM3-204ENST00000323144 CST5P28325 142 aaPredicted RBP14.59□□□□□ -0.07
TPM3-204ENST00000323144 EPHB4P54760 987 aa14.59□□□□□ -0.07
TPM3-204ENST00000323144 SHHQ15465 462 aa14.59□□□□□ -0.07
TPM3-204ENST00000323144 GPR153Q6NV75 609 aa14.59□□□□□ -0.07
TPM3-204ENST00000323144 SLC30A10Q6XR72 485 aa14.59□□□□□ -0.07
TPM3-204ENST00000323144 CHD1LQ86WJ1 897 aa14.59□□□□□ -0.07
TPM3-204ENST00000323144 PLEKHM2Q8IWE5 1019 aa14.59□□□□□ -0.07
TPM3-204ENST00000323144 FBXO16Q8IX29 292 aaPredicted RBP14.59□□□□□ -0.07
TPM3-204ENST00000323144 DCAF4Q8WV16 495 aa14.59□□□□□ -0.07
TPM3-204ENST00000323144 TRERF1Q96PN7 1200 aa14.59□□□□□ -0.07
TPM3-204ENST00000323144 TMEM47Q9BQJ4 181 aa14.59□□□□□ -0.07
TPM3-204ENST00000323144 UPF3AQ9H1J1 476 aaKnown RBP14.59□□□□□ -0.07
TPM3-204ENST00000323144 RANBP17Q9H2T7 1088 aaKnown RBP14.59□□□□□ -0.07
TPM3-204ENST00000323144 STARD7Q9NQZ5 370 aa14.59□□□□□ -0.07
TPM3-204ENST00000323144 MTMR10Q9NXD2 777 aa14.59□□□□□ -0.07
TPM3-204ENST00000323144 CCPG1Q9ULG6 757 aa14.59□□□□□ -0.07
TPM3-204ENST00000323144 NFIBO00712 420 aa14.58□□□□□ -0.08
TPM3-204ENST00000323144 PLA2G6O60733 806 aa14.58□□□□□ -0.08
TPM3-204ENST00000323144 DUSP11O75319 330 aaKnown RBP14.58□□□□□ -0.08
TPM3-204ENST00000323144 SDSP20132 328 aa14.58□□□□□ -0.08
TPM3-204ENST00000323144 BEX3Q00994 111 aa14.58□□□□□ -0.08
TPM3-204ENST00000323144 NUCB1Q02818 461 aa14.58□□□□□ -0.08
TPM3-204ENST00000323144 KCNA10Q16322 511 aa14.58□□□□□ -0.08
TPM3-204ENST00000323144 PPP4R3BQ5MIZ7 849 aa14.58□□□□□ -0.08
TPM3-204ENST00000323144 TMEM63BQ5T3F8 832 aa14.58□□□□□ -0.08
TPM3-204ENST00000323144 SYDE2Q5VT97 1194 aa14.58□□□□□ -0.08
TPM3-204ENST00000323144 RCSD1Q6JBY9 416 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms