RNA–Protein interactions for RNA: ENST00000321105.9

TOP3A-201, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,056 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-201ENST00000321105 PAGE5Q96GU1 130 aa12.29□□□□□ -0.44
TOP3A-201ENST00000321105 ACBD3Q9H3P7 528 aa12.29□□□□□ -0.44
TOP3A-201ENST00000321105 USP17L10C9JJH3 530 aa12.29□□□□□ -0.44
TOP3A-201ENST00000321105 MAPK8IP2Q13387 824 aaPredicted RBP12.29□□□□□ -0.44
TOP3A-201ENST00000321105 RRAGAQ7L523 313 aa12.29□□□□□ -0.44
TOP3A-201ENST00000321105 HS2ST1Q7LGA3 356 aa12.29□□□□□ -0.44
TOP3A-201ENST00000321105 FBXO11Q86XK2 927 aa12.29□□□□□ -0.44
TOP3A-201ENST00000321105 DPF2Q92785 391 aa12.29□□□□□ -0.44
TOP3A-201ENST00000321105 RGPD8O14715 1765 aaPredicted RBP12.28□□□□□ -0.44
TOP3A-201ENST00000321105 SFI1A8K8P3 1242 aa12.28□□□□□ -0.44
TOP3A-201ENST00000321105 TMEM110-MUSTN1A8MSY1 372 aa12.28□□□□□ -0.44
TOP3A-201ENST00000321105 B4DLN1 442 aa12.28□□□□□ -0.44
TOP3A-201ENST00000321105 CRKP46108 304 aa12.28□□□□□ -0.44
TOP3A-201ENST00000321105 MYCT1Q8N699 235 aa12.28□□□□□ -0.44
TOP3A-201ENST00000321105 TESPA1A2RU30 521 aaPredicted RBP12.28□□□□□ -0.44
TOP3A-201ENST00000321105 C12orf60Q5U649 245 aa12.28□□□□□ -0.44
TOP3A-201ENST00000321105 CNNM4Q6P4Q7 775 aa12.28□□□□□ -0.44
TOP3A-201ENST00000321105 VPS36Q86VN1 386 aa12.28□□□□□ -0.44
TOP3A-201ENST00000321105 DGKHQ86XP1 1220 aa12.28□□□□□ -0.44
TOP3A-201ENST00000321105 MYRIPQ8NFW9 859 aa12.28□□□□□ -0.44
TOP3A-201ENST00000321105 CTNNBL1Q8WYA6 563 aaPredicted RBP12.28□□□□□ -0.44
TOP3A-201ENST00000321105 EHMT1Q9H9B1 1298 aa12.28□□□□□ -0.44
TOP3A-201ENST00000321105 CGNQ9P2M7 1197 aaKnown RBP12.28□□□□□ -0.44
TOP3A-201ENST00000321105 CTAGE15A4D2H0 777 aa12.28□□□□□ -0.44
TOP3A-201ENST00000321105 ARHGAP6O43182 974 aa12.28□□□□□ -0.44
TOP3A-201ENST00000321105 CTAGE8P0CG41 777 aa12.28□□□□□ -0.44
TOP3A-201ENST00000321105 FGFR2P21802 821 aa12.28□□□□□ -0.44
TOP3A-201ENST00000321105 GRIK5Q16478 980 aa12.28□□□□□ -0.44
TOP3A-201ENST00000321105 CTAGE6Q86UF2 777 aa12.28□□□□□ -0.44
TOP3A-201ENST00000321105 CTAGE4Q8IX94 777 aa12.28□□□□□ -0.44
TOP3A-201ENST00000321105 PDLIM2Q96JY6 352 aa12.28□□□□□ -0.44
TOP3A-201ENST00000321105 MRPL44Q9H9J2 332 aaKnown RBP12.28□□□□□ -0.44
TOP3A-201ENST00000321105 DNM3Q9UQ16 869 aa12.28□□□□□ -0.44
TOP3A-201ENST00000321105 C3P01024 1663 aa12.28□□□□□ -0.44
TOP3A-201ENST00000321105 NPR1P16066 1061 aa12.27□□□□□ -0.44
TOP3A-201ENST00000321105 FBXO33Q7Z6M2 555 aa12.27□□□□□ -0.44
TOP3A-201ENST00000321105 SH2D3AQ9BRG2 576 aa12.27□□□□□ -0.44
TOP3A-201ENST00000321105 LZTS2Q9BRK4 669 aa12.27□□□□□ -0.44
TOP3A-201ENST00000321105 JCADQ9P266 1359 aa12.27□□□□□ -0.44
TOP3A-201ENST00000321105 ENC1O14682 589 aa12.27□□□□□ -0.45
TOP3A-201ENST00000321105 GJC1P36383 396 aa12.27□□□□□ -0.45
TOP3A-201ENST00000321105 SPATA1Q5VX52 437 aa12.27□□□□□ -0.45
TOP3A-201ENST00000321105 DPH6Q7L8W6 267 aa12.27□□□□□ -0.45
TOP3A-201ENST00000321105 NBPF11Q86T75 865 aa12.27□□□□□ -0.45
TOP3A-201ENST00000321105 METTL16Q86W50 562 aaKnown RBP12.27□□□□□ -0.45
TOP3A-201ENST00000321105 BCL9O00512 1426 aa12.27□□□□□ -0.45
TOP3A-201ENST00000321105 MROH7-TTC4A0A0A0MT08 1334 aa12.27□□□□□ -0.45
TOP3A-201ENST00000321105 GOLGA6L9A6NEM1 432 aa12.27□□□□□ -0.45
TOP3A-201ENST00000321105 FLOT1O75955 427 aa12.27□□□□□ -0.45
TOP3A-201ENST00000321105 VEGFAP15692 232 aaPredicted RBP12.27□□□□□ -0.45
TOP3A-201ENST00000321105 GTF2F1P35269 517 aaKnown RBP eCLIP12.27□□□□□ -0.45
TOP3A-201ENST00000321105 PRAMEF18Q5VWM3 479 aa12.27□□□□□ -0.45
TOP3A-201ENST00000321105 RESP18Q5W5W9 173 aa12.27□□□□□ -0.45
TOP3A-201ENST00000321105 DEFB132Q7Z7B7 95 aa12.27□□□□□ -0.45
TOP3A-201ENST00000321105 TAX1BP1Q86VP1 789 aa12.27□□□□□ -0.45
TOP3A-201ENST00000321105 CERKQ8TCT0 537 aa12.27□□□□□ -0.45
TOP3A-201ENST00000321105 LRRC27Q9C0I9 530 aa12.27□□□□□ -0.45
TOP3A-201ENST00000321105 COA1Q9GZY4 146 aa12.27□□□□□ -0.45
TOP3A-201ENST00000321105 BCCIPQ9P287 314 aaKnown RBP eCLIP12.27□□□□□ -0.45
TOP3A-201ENST00000321105 DAGLAQ9Y4D2 1042 aa12.27□□□□□ -0.45
TOP3A-201ENST00000321105 PNPLA7Q6ZV29 1317 aa12.27□□□□□ -0.45
TOP3A-201ENST00000321105 AP5Z1O43299 807 aa12.27□□□□□ -0.45
TOP3A-201ENST00000321105 KRT86O43790 486 aa12.27□□□□□ -0.45
TOP3A-201ENST00000321105 TDP2O95551 362 aa12.27□□□□□ -0.45
TOP3A-201ENST00000321105 DNAJC21Q5F1R6 531 aaKnown RBP12.27□□□□□ -0.45
TOP3A-201ENST00000321105 POLLQ9UGP5 575 aa12.27□□□□□ -0.45
TOP3A-201ENST00000321105 SOWAHDA6NJG2 315 aa12.26□□□□□ -0.45
TOP3A-201ENST00000321105 TEX33O43247 280 aa12.26□□□□□ -0.45
TOP3A-201ENST00000321105 GTPBP6O43824 516 aaPredicted RBP12.26□□□□□ -0.45
TOP3A-201ENST00000321105 RBL2Q08999 1139 aa12.26□□□□□ -0.45
TOP3A-201ENST00000321105 PFKFB3Q16875 520 aaPredicted RBP12.26□□□□□ -0.45
TOP3A-201ENST00000321105 MASTLQ96GX5 879 aa12.26□□□□□ -0.45
TOP3A-201ENST00000321105 GOPCQ9HD26 462 aa12.26□□□□□ -0.45
TOP3A-201ENST00000321105 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.26□□□□□ -0.45
TOP3A-201ENST00000321105 PEAK1Q9H792 1746 aa12.26□□□□□ -0.45
TOP3A-201ENST00000321105 GAS7O60861 476 aa12.26□□□□□ -0.45
TOP3A-201ENST00000321105 CYP2J2P51589 502 aa12.26□□□□□ -0.45
TOP3A-201ENST00000321105 NFIAQ12857 509 aa12.26□□□□□ -0.45
TOP3A-201ENST00000321105 SMCR8Q8TEV9 937 aaPredicted RBP12.26□□□□□ -0.45
TOP3A-201ENST00000321105 ALS2CR12Q96Q35 445 aa12.26□□□□□ -0.45
TOP3A-201ENST00000321105 PPP2R2CQ9Y2T4 447 aa12.26□□□□□ -0.45
TOP3A-201ENST00000321105 GYS1P13807 737 aa12.26□□□□□ -0.45
TOP3A-201ENST00000321105 LLGL1Q15334 1064 aa12.26□□□□□ -0.45
TOP3A-201ENST00000321105 CC2D2BQ6DHV5 1058 aa12.26□□□□□ -0.45
TOP3A-201ENST00000321105 BARGINQ6ZT62 677 aa12.26□□□□□ -0.45
TOP3A-201ENST00000321105 CCDC113Q9H0I3 377 aa12.26□□□□□ -0.45
TOP3A-201ENST00000321105 ARFGAP3Q9NP61 516 aa12.26□□□□□ -0.45
TOP3A-201ENST00000321105 PICK1Q9NRD5 415 aa12.26□□□□□ -0.45
TOP3A-201ENST00000321105 PI4KBQ9UBF8 816 aa12.26□□□□□ -0.45
TOP3A-201ENST00000321105 ARHGEF35A5YM69 484 aa12.25□□□□□ -0.45
TOP3A-201ENST00000321105 ECE2O60344 883 aa12.25□□□□□ -0.45
TOP3A-201ENST00000321105 PCP11498 1178 aaKnown RBP12.25□□□□□ -0.45
TOP3A-201ENST00000321105 EEF2P13639 858 aaKnown RBP12.25□□□□□ -0.45
TOP3A-201ENST00000321105 CYP27A1Q02318 531 aa12.25□□□□□ -0.45
TOP3A-201ENST00000321105 CETN1Q12798 172 aa12.25□□□□□ -0.45
TOP3A-201ENST00000321105 ARHGAP27Q6ZUM4 889 aa12.25□□□□□ -0.45
TOP3A-201ENST00000321105 ACRBPQ8NEB7 543 aa12.25□□□□□ -0.45
TOP3A-201ENST00000321105 KCNB2Q92953 911 aa12.25□□□□□ -0.45
TOP3A-201ENST00000321105 RIOK1Q9BRS2 568 aaKnown RBP12.25□□□□□ -0.45
TOP3A-201ENST00000321105 CETN3O15182 167 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms