RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 STOX1Q6ZVD7 989 aa7.39□□□□□ -1.23
ZNF540-201ENST00000316433 VSTM4Q8IW00 320 aa7.39□□□□□ -1.23
ZNF540-201ENST00000316433 RNF168Q8IYW5 571 aaPredicted RBP7.39□□□□□ -1.23
ZNF540-201ENST00000316433 TMEM87BQ96K49 555 aa7.39□□□□□ -1.23
ZNF540-201ENST00000316433 DHRS1Q96LJ7 313 aa7.39□□□□□ -1.23
ZNF540-201ENST00000316433 PYM1Q9BRP8 204 aaKnown RBP7.39□□□□□ -1.23
ZNF540-201ENST00000316433 UBE2OQ9C0C9 1292 aaKnown RBP7.39□□□□□ -1.23
ZNF540-201ENST00000316433 NACA2Q9H009 215 aa7.39□□□□□ -1.23
ZNF540-201ENST00000316433 GOLPH3LQ9H4A5 285 aa7.39□□□□□ -1.23
ZNF540-201ENST00000316433 LGR6Q9HBX8 967 aa7.39□□□□□ -1.23
ZNF540-201ENST00000316433 TBC1D7Q9P0N9 293 aa7.39□□□□□ -1.23
ZNF540-201ENST00000316433 WDR37Q9Y2I8 494 aa7.39□□□□□ -1.23
ZNF540-201ENST00000316433 COL5A2P05997 1499 aaPredicted RBP7.39□□□□□ -1.23
ZNF540-201ENST00000316433 A0A1B0GVL5 298 aa7.39□□□□□ -1.23
ZNF540-201ENST00000316433 PTPDC1A2A3K4 754 aa7.39□□□□□ -1.23
ZNF540-201ENST00000316433 OPLAHO14841 1288 aa7.39□□□□□ -1.23
ZNF540-201ENST00000316433 STX10O60499 249 aa7.39□□□□□ -1.23
ZNF540-201ENST00000316433 MBD4O95243 580 aa7.39□□□□□ -1.23
ZNF540-201ENST00000316433 GCP02774 474 aa7.39□□□□□ -1.23
ZNF540-201ENST00000316433 ERCC5P28715 1186 aaPredicted RBP7.39□□□□□ -1.23
ZNF540-201ENST00000316433 SESN3P58005 492 aa7.39□□□□□ -1.23
ZNF540-201ENST00000316433 MDM2Q00987 491 aaPredicted RBP7.39□□□□□ -1.23
ZNF540-201ENST00000316433 XRCC4Q13426 336 aa7.39□□□□□ -1.23
ZNF540-201ENST00000316433 PTPAQ15257 358 aa7.39□□□□□ -1.23
ZNF540-201ENST00000316433 KANK3Q6NY19 840 aa7.39□□□□□ -1.23
ZNF540-201ENST00000316433 Q6ZUG5 572 aa7.39□□□□□ -1.23
ZNF540-201ENST00000316433 ARHGAP27Q6ZUM4 889 aa7.39□□□□□ -1.23
ZNF540-201ENST00000316433 APLFQ8IW19 511 aaPredicted RBP7.39□□□□□ -1.23
ZNF540-201ENST00000316433 TEKT4Q8WW24 435 aa7.39□□□□□ -1.23
ZNF540-201ENST00000316433 PANX2Q96RD6 677 aa7.39□□□□□ -1.23
ZNF540-201ENST00000316433 RUFY1Q96T51 708 aa7.39□□□□□ -1.23
ZNF540-201ENST00000316433 MAP3K14Q99558 947 aa7.39□□□□□ -1.23
ZNF540-201ENST00000316433 FSD1Q9BTV5 496 aa7.39□□□□□ -1.23
ZNF540-201ENST00000316433 AATFQ9NY61 560 aaKnown RBP eCLIP7.39□□□□□ -1.23
ZNF540-201ENST00000316433 CACNA1SQ13698 1873 aa7.39□□□□□ -1.23
ZNF540-201ENST00000316433 MYH1P12882 1939 aa7.38□□□□□ -1.23
ZNF540-201ENST00000316433 RASSF10A6NK89 507 aa7.38□□□□□ -1.23
ZNF540-201ENST00000316433 FOXP2O15409 715 aa7.38□□□□□ -1.23
ZNF540-201ENST00000316433 VIL1P09327 827 aaKnown RBP7.38□□□□□ -1.23
ZNF540-201ENST00000316433 PARP1P09874 1014 aaKnown RBP7.38□□□□□ -1.23
ZNF540-201ENST00000316433 FDPSP14324 419 aaKnown RBP7.38□□□□□ -1.23
ZNF540-201ENST00000316433 GNAQP50148 359 aa7.38□□□□□ -1.23
ZNF540-201ENST00000316433 PDCLQ13371 301 aa7.38□□□□□ -1.23
ZNF540-201ENST00000316433 UBE3CQ15386 1083 aa7.38□□□□□ -1.23
ZNF540-201ENST00000316433 COBLL1Q53SF7 1204 aa7.38□□□□□ -1.23
ZNF540-201ENST00000316433 GALNT17Q6IS24 598 aa7.38□□□□□ -1.23
ZNF540-201ENST00000316433 C6orf89Q6UWU4 347 aa7.38□□□□□ -1.23
ZNF540-201ENST00000316433 IQCF2Q8IXL9 164 aa7.38□□□□□ -1.23
ZNF540-201ENST00000316433 CCHCR1Q8TD31 782 aa7.38□□□□□ -1.23
ZNF540-201ENST00000316433 ZNF473Q8WTR7 871 aaKnown RBP7.38□□□□□ -1.23
ZNF540-201ENST00000316433 IQCDQ96DY2 449 aa7.38□□□□□ -1.23
ZNF540-201ENST00000316433 WDR35Q9P2L0 1181 aa7.38□□□□□ -1.23
ZNF540-201ENST00000316433 HPS5Q9UPZ3 1129 aa7.38□□□□□ -1.23
ZNF540-201ENST00000316433 CTAGE15A4D2H0 777 aa7.38□□□□□ -1.23
ZNF540-201ENST00000316433 GOLGA8KD6RF30 607 aa7.38□□□□□ -1.23
ZNF540-201ENST00000316433 BMP15O95972 392 aa7.38□□□□□ -1.23
ZNF540-201ENST00000316433 CTAGE8P0CG41 777 aa7.38□□□□□ -1.23
ZNF540-201ENST00000316433 MCM3P25205 808 aa7.38□□□□□ -1.23
ZNF540-201ENST00000316433 PBX1P40424 430 aa7.38□□□□□ -1.23
ZNF540-201ENST00000316433 MKRN4PQ13434 485 aaPredicted RBP7.38□□□□□ -1.23
ZNF540-201ENST00000316433 KBTBD12Q3ZCT8 623 aa7.38□□□□□ -1.23
ZNF540-201ENST00000316433 ZNF572Q7Z3I7 529 aaPredicted RBP7.38□□□□□ -1.23
ZNF540-201ENST00000316433 CTAGE6Q86UF2 777 aa7.38□□□□□ -1.23
ZNF540-201ENST00000316433 CTAGE4Q8IX94 777 aa7.38□□□□□ -1.23
ZNF540-201ENST00000316433 IFNL2Q8IZJ0 200 aa7.38□□□□□ -1.23
ZNF540-201ENST00000316433 SMYD1Q8NB12 490 aa7.38□□□□□ -1.23
ZNF540-201ENST00000316433 PCMTD2Q9NV79 361 aa7.38□□□□□ -1.23
ZNF540-201ENST00000316433 SLC5A4Q9NY91 659 aa7.38□□□□□ -1.23
ZNF540-201ENST00000316433 BAIAP2L1Q9UHR4 511 aa7.38□□□□□ -1.23
ZNF540-201ENST00000316433 DACH1Q9UI36 760 aa7.38□□□□□ -1.23
ZNF540-201ENST00000316433 AHDC1Q5TGY3 1603 aaPredicted RBP7.38□□□□□ -1.23
ZNF540-201ENST00000316433 MAST3O60307 1309 aa7.38□□□□□ -1.23
ZNF540-201ENST00000316433 E7EWF7 191 aa7.38□□□□□ -1.23
ZNF540-201ENST00000316433 SH2B2O14492 632 aaPredicted RBP7.38□□□□□ -1.23
ZNF540-201ENST00000316433 CNGA1P29973 690 aa7.38□□□□□ -1.23
ZNF540-201ENST00000316433 ALDH3A1P30838 453 aa7.38□□□□□ -1.23
ZNF540-201ENST00000316433 FAM173BQ6P4H8 233 aa7.38□□□□□ -1.23
ZNF540-201ENST00000316433 ANKLE2Q86XL3 938 aa7.38□□□□□ -1.23
ZNF540-201ENST00000316433 ENOX1Q8TC92 643 aaKnown RBP7.38□□□□□ -1.23
ZNF540-201ENST00000316433 CNKSR1Q969H4 720 aa7.38□□□□□ -1.23
ZNF540-201ENST00000316433 TRAIPQ9BWF2 469 aa7.38□□□□□ -1.23
ZNF540-201ENST00000316433 OSBPL1AQ9BXW6 950 aa7.38□□□□□ -1.23
ZNF540-201ENST00000316433 EPN3Q9H201 632 aa7.38□□□□□ -1.23
ZNF540-201ENST00000316433 C19orf44Q9H6X5 657 aa7.38□□□□□ -1.23
ZNF540-201ENST00000316433 PAG1Q9NWQ8 432 aa7.38□□□□□ -1.23
ZNF540-201ENST00000316433 GALNT8Q9NY28 637 aa7.38□□□□□ -1.23
ZNF540-201ENST00000316433 NOP53Q9NZM5 478 aaKnown RBP7.38□□□□□ -1.23
ZNF540-201ENST00000316433 C2CD2Q9Y426 696 aa7.38□□□□□ -1.23
ZNF540-201ENST00000316433 QSER1Q2KHR3 1735 aa7.37□□□□□ -1.23
ZNF540-201ENST00000316433 PNPLA7Q6ZV29 1317 aa7.37□□□□□ -1.23
ZNF540-201ENST00000316433 LRRD1A4D1F6 860 aa7.37□□□□□ -1.23
ZNF540-201ENST00000316433 TMEM221A6NGB7 291 aa7.37□□□□□ -1.23
ZNF540-201ENST00000316433 MYBL1P10243 752 aa7.37□□□□□ -1.23
ZNF540-201ENST00000316433 MXRA7P84157 204 aa7.37□□□□□ -1.23
ZNF540-201ENST00000316433 KIF23Q02241 960 aaPredicted RBP7.37□□□□□ -1.23
ZNF540-201ENST00000316433 CUL4BQ13620 913 aa7.37□□□□□ -1.23
ZNF540-201ENST00000316433 CCDC92Q53HC0 331 aaPredicted RBP7.37□□□□□ -1.23
ZNF540-201ENST00000316433 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.37□□□□□ -1.23
ZNF540-201ENST00000316433 PIDD1Q9HB75 910 aa7.37□□□□□ -1.23
ZNF540-201ENST00000316433 PCDHA7Q9UN72 937 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms