RNA–Protein interactions for RNA: ENST00000310421.4

VCPIP1-201, Transcript of valosin containing protein interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPIP1, Length 9,942 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPIP1-201ENST00000310421 DBNDD2Q9BQY9 259 aa12.41□□□□□ -0.42
VCPIP1-201ENST00000310421 Q9H521 79 aa12.41□□□□□ -0.42
VCPIP1-201ENST00000310421 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.41□□□□□ -0.42
VCPIP1-201ENST00000310421 CEP104O60308 925 aa12.41□□□□□ -0.42
VCPIP1-201ENST00000310421 MYL1P05976 194 aa12.41□□□□□ -0.42
VCPIP1-201ENST00000310421 CTDSPL2Q05D32 466 aa12.41□□□□□ -0.42
VCPIP1-201ENST00000310421 MAP7D3Q8IWC1 876 aa12.41□□□□□ -0.42
VCPIP1-201ENST00000310421 TSPYL6Q8N831 410 aa12.41□□□□□ -0.42
VCPIP1-201ENST00000310421 HOMER3Q9NSC5 361 aa12.41□□□□□ -0.42
VCPIP1-201ENST00000310421 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.41□□□□□ -0.42
VCPIP1-201ENST00000310421 TMEM191BP0C7N4 346 aa12.41□□□□□ -0.42
VCPIP1-201ENST00000310421 XRCC6P12956 609 aaKnown RBP eCLIP12.41□□□□□ -0.42
VCPIP1-201ENST00000310421 NEK8Q86SG6 692 aa12.41□□□□□ -0.42
VCPIP1-201ENST00000310421 NLGN1Q8N2Q7 840 aa12.41□□□□□ -0.42
VCPIP1-201ENST00000310421 E7EWF7 191 aa12.41□□□□□ -0.42
VCPIP1-201ENST00000310421 GAP43P17677 238 aa12.41□□□□□ -0.42
VCPIP1-201ENST00000310421 KCTD2Q14681 263 aa12.41□□□□□ -0.42
VCPIP1-201ENST00000310421 ANKRD20A3Q5VUR7 823 aa12.41□□□□□ -0.42
VCPIP1-201ENST00000310421 ARHGEF2Q92974 986 aaKnown RBP12.41□□□□□ -0.42
VCPIP1-201ENST00000310421 LSM14BQ9BX40 385 aaKnown RBP12.41□□□□□ -0.42
VCPIP1-201ENST00000310421 TBC1D7Q9P0N9 293 aa12.41□□□□□ -0.42
VCPIP1-201ENST00000310421 RGS16O15492 202 aaPredicted RBP12.41□□□□□ -0.42
VCPIP1-201ENST00000310421 PCK1P35558 622 aa12.41□□□□□ -0.42
VCPIP1-201ENST00000310421 ZC3H15Q8WU90 426 aaKnown RBP12.41□□□□□ -0.42
VCPIP1-201ENST00000310421 NRBP2Q9NSY0 501 aa12.41□□□□□ -0.42
VCPIP1-201ENST00000310421 USTQ9Y2C2 406 aa12.41□□□□□ -0.42
VCPIP1-201ENST00000310421 CDK12Q9NYV4 1490 aaPredicted RBP12.41□□□□□ -0.42
VCPIP1-201ENST00000310421 CIAO1O76071 339 aa12.41□□□□□ -0.42
VCPIP1-201ENST00000310421 GARSP41250 739 aaKnown RBP12.41□□□□□ -0.42
VCPIP1-201ENST00000310421 TFAP4Q01664 338 aa12.41□□□□□ -0.42
VCPIP1-201ENST00000310421 C2CD5Q86YS7 1000 aa12.41□□□□□ -0.42
VCPIP1-201ENST00000310421 PALM2Q8IXS6 379 aa12.41□□□□□ -0.42
VCPIP1-201ENST00000310421 CACTINQ8WUQ7 758 aaKnown RBP12.4□□□□□ -0.42
VCPIP1-201ENST00000310421 CDKL2Q92772 493 aa12.4□□□□□ -0.42
VCPIP1-201ENST00000310421 PHKBQ93100 1093 aa12.4□□□□□ -0.42
VCPIP1-201ENST00000310421 PRKAG2Q9UGJ0 569 aa12.4□□□□□ -0.42
VCPIP1-201ENST00000310421 PHLPP2Q6ZVD8 1323 aa12.4□□□□□ -0.42
VCPIP1-201ENST00000310421 VPS37BQ9H9H4 285 aa12.4□□□□□ -0.42
VCPIP1-201ENST00000310421 ST7Q9NRC1 585 aa12.4□□□□□ -0.42
VCPIP1-201ENST00000310421 PASKQ96RG2 1323 aa12.4□□□□□ -0.42
VCPIP1-201ENST00000310421 ESYT2A0FGR8 921 aa12.4□□□□□ -0.42
VCPIP1-201ENST00000310421 LONP1P36776 959 aaKnown RBP12.4□□□□□ -0.42
VCPIP1-201ENST00000310421 MORC3Q14149 939 aa12.4□□□□□ -0.42
VCPIP1-201ENST00000310421 GPR162Q16538 588 aa12.4□□□□□ -0.42
VCPIP1-201ENST00000310421 WHAMMP3Q1A5X7 153 aa12.4□□□□□ -0.42
VCPIP1-201ENST00000310421 NCOA5Q9HCD5 579 aaKnown RBP12.4□□□□□ -0.42
VCPIP1-201ENST00000310421 SAR1BQ9Y6B6 198 aa12.4□□□□□ -0.42
VCPIP1-201ENST00000310421 TLR3O15455 904 aaKnown RBP12.4□□□□□ -0.42
VCPIP1-201ENST00000310421 RNF40O75150 1001 aa12.4□□□□□ -0.42
VCPIP1-201ENST00000310421 GADL1Q6ZQY3 521 aa12.4□□□□□ -0.42
VCPIP1-201ENST00000310421 CCHCR1Q8TD31 782 aa12.4□□□□□ -0.42
VCPIP1-201ENST00000310421 CCDC17Q96LX7 622 aa12.4□□□□□ -0.42
VCPIP1-201ENST00000310421 ABCB5Q2M3G0 1257 aa12.4□□□□□ -0.42
VCPIP1-201ENST00000310421 SEPT14Q6ZU15 432 aa12.4□□□□□ -0.42
VCPIP1-201ENST00000310421 AK8Q96MA6 479 aa12.4□□□□□ -0.42
VCPIP1-201ENST00000310421 BAG5Q9UL15 447 aa12.4□□□□□ -0.42
VCPIP1-201ENST00000310421 PCDHA12Q9UN75 941 aa12.4□□□□□ -0.42
VCPIP1-201ENST00000310421 ZBTB7BO15156 539 aaPredicted RBP12.4□□□□□ -0.42
VCPIP1-201ENST00000310421 SCG2P13521 617 aa12.4□□□□□ -0.42
VCPIP1-201ENST00000310421 PRR16Q569H4 304 aa12.4□□□□□ -0.42
VCPIP1-201ENST00000310421 SNX14Q9Y5W7 946 aa12.4□□□□□ -0.42
VCPIP1-201ENST00000310421 PRDM1O75626 825 aa12.4□□□□□ -0.42
VCPIP1-201ENST00000310421 NSFP46459 744 aaKnown RBP12.4□□□□□ -0.42
VCPIP1-201ENST00000310421 ABI1Q8IZP0 508 aa12.4□□□□□ -0.42
VCPIP1-201ENST00000310421 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.4□□□□□ -0.428e-7■■■■■ 27
VCPIP1-201ENST00000310421 BEND3Q5T5X7 828 aa12.4□□□□□ -0.43
VCPIP1-201ENST00000310421 ANAPC5Q9UJX4 755 aa12.4□□□□□ -0.43
VCPIP1-201ENST00000310421 TARBP1Q13395 1621 aaKnown RBP12.39□□□□□ -0.43
VCPIP1-201ENST00000310421 PPFIA2O75334 1257 aa12.39□□□□□ -0.43
VCPIP1-201ENST00000310421 TIMM10P62072 90 aa12.39□□□□□ -0.43
VCPIP1-201ENST00000310421 RRAGAQ7L523 313 aa12.39□□□□□ -0.43
VCPIP1-201ENST00000310421 PANK4Q9NVE7 773 aa12.39□□□□□ -0.43
VCPIP1-201ENST00000310421 LARSQ9P2J5 1176 aaKnown RBP12.39□□□□□ -0.43
VCPIP1-201ENST00000310421 NCAPD2Q15021 1401 aa12.39□□□□□ -0.43
VCPIP1-201ENST00000310421 GOLGA4Q13439 2230 aaKnown RBP12.39□□□□□ -0.43
VCPIP1-201ENST00000310421 OSBPP22059 807 aa12.39□□□□□ -0.43
VCPIP1-201ENST00000310421 ALCAMQ13740 583 aa12.39□□□□□ -0.43
VCPIP1-201ENST00000310421 PPP2R5DQ14738 602 aa12.39□□□□□ -0.43
VCPIP1-201ENST00000310421 FAM47CQ5HY64 1035 aa12.39□□□□□ -0.43
VCPIP1-201ENST00000310421 CYP2J2P51589 502 aa12.39□□□□□ -0.43
VCPIP1-201ENST00000310421 ADALQ6DHV7 355 aa12.39□□□□□ -0.43
VCPIP1-201ENST00000310421 TTLL1O95922 423 aa12.39□□□□□ -0.43
VCPIP1-201ENST00000310421 GCFC2P16383 781 aaKnown RBP12.39□□□□□ -0.43
VCPIP1-201ENST00000310421 FBXO11Q86XK2 927 aa12.39□□□□□ -0.43
VCPIP1-201ENST00000310421 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.39□□□□□ -0.43
VCPIP1-201ENST00000310421 GSTA1P08263 222 aa12.39□□□□□ -0.43
VCPIP1-201ENST00000310421 GSTA2P09210 222 aa12.39□□□□□ -0.43
VCPIP1-201ENST00000310421 ZNF594Q96JF6 807 aaPredicted RBP12.39□□□□□ -0.43
VCPIP1-201ENST00000310421 CPSF2Q9P2I0 782 aaKnown RBP12.39□□□□□ -0.43
VCPIP1-201ENST00000310421 LCMT1Q9UIC8 334 aa12.39□□□□□ -0.43
VCPIP1-201ENST00000310421 MYO1EQ12965 1108 aa12.39□□□□□ -0.43
VCPIP1-201ENST00000310421 MMS19Q96T76 1030 aa12.39□□□□□ -0.43
VCPIP1-201ENST00000310421 SUPT20HL1Q3ZLR7 823 aa12.39□□□□□ -0.43
VCPIP1-201ENST00000310421 KPNA2P52292 529 aaKnown RBP12.39□□□□□ -0.43
VCPIP1-201ENST00000310421 VSIG1Q86XK7 387 aa12.39□□□□□ -0.43
VCPIP1-201ENST00000310421 PNMA3Q9UL41 463 aa12.39□□□□□ -0.43
VCPIP1-201ENST00000310421 CCND2P30279 289 aa12.38□□□□□ -0.43
VCPIP1-201ENST00000310421 MAGEA1P43355 309 aa12.38□□□□□ -0.43
VCPIP1-201ENST00000310421 XKR9Q5GH70 373 aa12.38□□□□□ -0.43
VCPIP1-201ENST00000310421 MIS18BP1Q6P0N0 1132 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms