RNA–Protein interactions for RNA: ENST00000309784.8

TRIM59-201, Transcript of tripartite motif containing 59, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM59, Length 3,867 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-201ENST00000309784 RIOX1Q9H6W3 641 aa12.68□□□□□ -0.38
TRIM59-201ENST00000309784 ZHX2Q9Y6X8 837 aa12.68□□□□□ -0.38
TRIM59-201ENST00000309784 KIF13BQ9NQT8 1826 aa12.68□□□□□ -0.38
TRIM59-201ENST00000309784 PFKFB1P16118 471 aa12.68□□□□□ -0.38
TRIM59-201ENST00000309784 TOB1P50616 345 aaPredicted RBP12.68□□□□□ -0.38
TRIM59-201ENST00000309784 SHISA4Q96DD7 197 aa12.68□□□□□ -0.38
TRIM59-201ENST00000309784 PPP1R12BO60237 982 aaPredicted RBP12.67□□□□□ -0.38
TRIM59-201ENST00000309784 CUTAO60888 179 aa12.67□□□□□ -0.38
TRIM59-201ENST00000309784 FLOT1O75955 427 aa12.67□□□□□ -0.38
TRIM59-201ENST00000309784 BMP15O95972 392 aa12.67□□□□□ -0.38
TRIM59-201ENST00000309784 GALNT17Q6IS24 598 aa12.67□□□□□ -0.38
TRIM59-201ENST00000309784 CNNM3Q8NE01 707 aa12.67□□□□□ -0.38
TRIM59-201ENST00000309784 MKL1Q969V6 931 aa12.67□□□□□ -0.38
TRIM59-201ENST00000309784 VCPKMTQ9H867 229 aa12.67□□□□□ -0.38
TRIM59-201ENST00000309784 DCAF8L1A6NGE4 600 aa12.67□□□□□ -0.38
TRIM59-201ENST00000309784 BIN1O00499 593 aa12.67□□□□□ -0.38
TRIM59-201ENST00000309784 GRIN3BO60391 1043 aa12.67□□□□□ -0.38
TRIM59-201ENST00000309784 CFBP00751 764 aa12.67□□□□□ -0.38
TRIM59-201ENST00000309784 TAL1P17542 331 aaPredicted RBP12.67□□□□□ -0.38
TRIM59-201ENST00000309784 MTMR2Q13614 643 aa12.67□□□□□ -0.38
TRIM59-201ENST00000309784 ISM2Q6H9L7 571 aa12.67□□□□□ -0.38
TRIM59-201ENST00000309784 TBCKQ8TEA7 893 aa12.67□□□□□ -0.38
TRIM59-201ENST00000309784 ZBED3Q96IU2 234 aaPredicted RBP12.67□□□□□ -0.38
TRIM59-201ENST00000309784 HOMER2Q9NSB8 354 aa12.67□□□□□ -0.38
TRIM59-201ENST00000309784 FBXO28Q9NVF7 368 aa12.67□□□□□ -0.38
TRIM59-201ENST00000309784 PCDHA6Q9UN73 950 aa12.67□□□□□ -0.38
TRIM59-201ENST00000309784 TMX2Q9Y320 296 aa12.67□□□□□ -0.38
TRIM59-201ENST00000309784 PCDHA8Q9Y5H6 950 aa12.67□□□□□ -0.38
TRIM59-201ENST00000309784 FER1L6Q2WGJ9 1857 aa12.67□□□□□ -0.38
TRIM59-201ENST00000309784 USP17L15C9J2P7 530 aa12.67□□□□□ -0.38
TRIM59-201ENST00000309784 USP17L13C9JLJ4 530 aa12.67□□□□□ -0.38
TRIM59-201ENST00000309784 ADM5C9JUS6 153 aa12.67□□□□□ -0.38
TRIM59-201ENST00000309784 USP17L11C9JVI0 530 aa12.67□□□□□ -0.38
TRIM59-201ENST00000309784 USP17L18D6R9N7 530 aa12.67□□□□□ -0.38
TRIM59-201ENST00000309784 USP17L22D6RA61 530 aa12.67□□□□□ -0.38
TRIM59-201ENST00000309784 USP17L17D6RBQ6 530 aa12.67□□□□□ -0.38
TRIM59-201ENST00000309784 USP17L19D6RCP7 530 aa12.67□□□□□ -0.38
TRIM59-201ENST00000309784 USP17L20D6RJB6 530 aa12.67□□□□□ -0.38
TRIM59-201ENST00000309784 TXLNAP40222 546 aa12.67□□□□□ -0.38
TRIM59-201ENST00000309784 USP17L24Q0WX57 530 aa12.67□□□□□ -0.38
TRIM59-201ENST00000309784 USP17L6PQ6QN14 398 aa12.67□□□□□ -0.38
TRIM59-201ENST00000309784 ZNF526Q8TF50 670 aaPredicted RBP12.67□□□□□ -0.38
TRIM59-201ENST00000309784 TBC1D12O60347 775 aa12.66□□□□□ -0.38
TRIM59-201ENST00000309784 PPP6R2O75170 966 aa12.66□□□□□ -0.38
TRIM59-201ENST00000309784 ZNF202O95125 648 aa12.66□□□□□ -0.38
TRIM59-201ENST00000309784 ZNF76P36508 570 aa12.66□□□□□ -0.38
TRIM59-201ENST00000309784 ZNF445P59923 1031 aa12.66□□□□□ -0.38
TRIM59-201ENST00000309784 SIAH1Q8IUQ4 282 aa12.66□□□□□ -0.38
TRIM59-201ENST00000309784 CLSTN2Q9H4D0 955 aa12.66□□□□□ -0.38
TRIM59-201ENST00000309784 AS3MTQ9HBK9 375 aa12.66□□□□□ -0.38
TRIM59-201ENST00000309784 CSADQ9Y600 493 aa12.66□□□□□ -0.38
TRIM59-201ENST00000309784 SPDYE3A6NKU9 549 aa12.66□□□□□ -0.38
TRIM59-201ENST00000309784 CTNND1O60716 968 aaKnown RBP12.66□□□□□ -0.38
TRIM59-201ENST00000309784 SNHG28P0DPA3 235 aa12.66□□□□□ -0.38
TRIM59-201ENST00000309784 SMARCA1P28370 1054 aa12.66□□□□□ -0.38
TRIM59-201ENST00000309784 HIRAP54198 1017 aaPredicted RBP12.66□□□□□ -0.38
TRIM59-201ENST00000309784 DGKZQ13574 1117 aa12.66□□□□□ -0.38
TRIM59-201ENST00000309784 KCNH3Q9ULD8 1083 aa12.66□□□□□ -0.38
TRIM59-201ENST00000309784 PRR12Q9ULL5 1215 aa12.66□□□□□ -0.38
TRIM59-201ENST00000309784 ADAMTS3O15072 1205 aa12.66□□□□□ -0.38
TRIM59-201ENST00000309784 NEK8Q86SG6 692 aa12.66□□□□□ -0.38
TRIM59-201ENST00000309784 GMCL1P1Q8NEA9 526 aa12.66□□□□□ -0.38
TRIM59-201ENST00000309784 ZMYND12Q9H0C1 365 aa12.66□□□□□ -0.38
TRIM59-201ENST00000309784 CSRNP2Q9H175 543 aa12.66□□□□□ -0.38
TRIM59-201ENST00000309784 hCG_1984214I3L0E3 225 aa12.65□□□□□ -0.38
TRIM59-201ENST00000309784 CMA1P23946 247 aa12.65□□□□□ -0.38
TRIM59-201ENST00000309784 ZNF713Q8N859 430 aaPredicted RBP12.65□□□□□ -0.38
TRIM59-201ENST00000309784 DHX58Q96C10 678 aa12.65□□□□□ -0.38
TRIM59-201ENST00000309784 HOOK1Q9UJC3 728 aaKnown RBP12.65□□□□□ -0.38
TRIM59-201ENST00000309784 POLR2DO15514 142 aaKnown RBP12.65□□□□□ -0.38
TRIM59-201ENST00000309784 EPHX2P34913 555 aa12.65□□□□□ -0.38
TRIM59-201ENST00000309784 GRIN1Q05586 938 aa12.65□□□□□ -0.38
TRIM59-201ENST00000309784 GMCL1Q96IK5 515 aa12.65□□□□□ -0.38
TRIM59-201ENST00000309784 TEPSINQ96N21 525 aa12.65□□□□□ -0.38
TRIM59-201ENST00000309784 A0A1W2PQ27 194 aa12.65□□□□□ -0.38
TRIM59-201ENST00000309784 A0A1W2PQ64 194 aa12.65□□□□□ -0.38
TRIM59-201ENST00000309784 A0A1W2PQD8 194 aa12.65□□□□□ -0.38
TRIM59-201ENST00000309784 PTPAQ15257 358 aa12.65□□□□□ -0.38
TRIM59-201ENST00000309784 DTHD1Q6ZMT9 781 aa12.65□□□□□ -0.38
TRIM59-201ENST00000309784 METTL16Q86W50 562 aaKnown RBP12.65□□□□□ -0.38
TRIM59-201ENST00000309784 PLIN2Q99541 437 aa12.65□□□□□ -0.38
TRIM59-201ENST00000309784 TMOD4Q9NZQ9 345 aa12.65□□□□□ -0.38
TRIM59-201ENST00000309784 BECN2A8MW95 431 aa12.64□□□□□ -0.39
TRIM59-201ENST00000309784 CDC25AP30304 524 aa12.64□□□□□ -0.39
TRIM59-201ENST00000309784 HOXA13P31271 388 aaPredicted RBP12.64□□□□□ -0.39
TRIM59-201ENST00000309784 HMGCS2P54868 508 aa12.64□□□□□ -0.39
TRIM59-201ENST00000309784 PLS1Q14651 629 aa12.64□□□□□ -0.39
TRIM59-201ENST00000309784 RBSNQ9H1K0 784 aa12.64□□□□□ -0.39
TRIM59-201ENST00000309784 A0A087WWV3 80 aa12.64□□□□□ -0.39
TRIM59-201ENST00000309784 CTAGE5O15320 804 aa12.64□□□□□ -0.39
TRIM59-201ENST00000309784 TRAPPC10P48553 1259 aa12.64□□□□□ -0.39
TRIM59-201ENST00000309784 CEP57L1Q8IYX8 460 aa12.64□□□□□ -0.39
TRIM59-201ENST00000309784 RGS22Q8NE09 1264 aa12.64□□□□□ -0.39
TRIM59-201ENST00000309784 ECM29Q5VYK3 1845 aa12.64□□□□□ -0.39
TRIM59-201ENST00000309784 NEMFO60524 1076 aa12.64□□□□□ -0.39
TRIM59-201ENST00000309784 XRCC6P12956 609 aaKnown RBP eCLIP12.64□□□□□ -0.39
TRIM59-201ENST00000309784 UBA7P41226 1012 aa12.64□□□□□ -0.39
TRIM59-201ENST00000309784 TXKP42681 527 aa12.64□□□□□ -0.39
TRIM59-201ENST00000309784 AFMP43652 599 aa12.64□□□□□ -0.39
TRIM59-201ENST00000309784 TYRO3Q06418 890 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms