RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 MRPL44Q9H9J2 332 aaKnown RBP13.01□□□□□ -0.33
PTPN2-201ENST00000309660 KCND1Q9NSA2 647 aa13.01□□□□□ -0.33
PTPN2-201ENST00000309660 PLCG1P19174 1290 aa13.01□□□□□ -0.33
PTPN2-201ENST00000309660 CACNB3P54284 484 aa13.01□□□□□ -0.33
PTPN2-201ENST00000309660 ASIC1P78348 528 aa13.01□□□□□ -0.33
PTPN2-201ENST00000309660 CCDC96Q2M329 555 aa13.01□□□□□ -0.33
PTPN2-201ENST00000309660 CDKAL1Q5VV42 579 aa13.01□□□□□ -0.33
PTPN2-201ENST00000309660 ZNF397Q8NF99 534 aaPredicted RBP13.01□□□□□ -0.33
PTPN2-201ENST00000309660 HPS3Q969F9 1004 aa13.01□□□□□ -0.33
PTPN2-201ENST00000309660 ZBTB9Q96C00 473 aa13.01□□□□□ -0.33
PTPN2-201ENST00000309660 PCMTD1Q96MG8 357 aaPredicted RBP13.01□□□□□ -0.33
PTPN2-201ENST00000309660 PYM1Q9BRP8 204 aaKnown RBP13.01□□□□□ -0.33
PTPN2-201ENST00000309660 FAM196BA6NMK8 535 aa13□□□□□ -0.33
PTPN2-201ENST00000309660 PPEF1O14829 653 aaPredicted RBP13□□□□□ -0.33
PTPN2-201ENST00000309660 MARCH6O60337 910 aa13□□□□□ -0.33
PTPN2-201ENST00000309660 AKR1B1P15121 316 aa13□□□□□ -0.33
PTPN2-201ENST00000309660 GNA11P29992 359 aa13□□□□□ -0.33
PTPN2-201ENST00000309660 SLC16A2P36021 539 aa13□□□□□ -0.33
PTPN2-201ENST00000309660 TCP10Q12799 353 aa13□□□□□ -0.33
PTPN2-201ENST00000309660 TEX35Q5T0J7 233 aa13□□□□□ -0.33
PTPN2-201ENST00000309660 RAD9BQ6WBX8 426 aa13□□□□□ -0.33
PTPN2-201ENST00000309660 APTXQ7Z2E3 356 aaKnown RBP13□□□□□ -0.33
PTPN2-201ENST00000309660 REXO1Q8N1G1 1221 aaKnown RBP13□□□□□ -0.33
PTPN2-201ENST00000309660 OR52Z1P0C646 297 aa13□□□□□ -0.33
PTPN2-201ENST00000309660 TNNI2P48788 182 aa13□□□□□ -0.33
PTPN2-201ENST00000309660 RBM5P52756 815 aaKnown RBP eCLIP13□□□□□ -0.33
PTPN2-201ENST00000309660 COPB1P53618 953 aaKnown RBP13□□□□□ -0.33
PTPN2-201ENST00000309660 PMS1P54277 932 aaKnown RBP13□□□□□ -0.33
PTPN2-201ENST00000309660 NAALADL2Q58DX5 795 aa13□□□□□ -0.33
PTPN2-201ENST00000309660 MSL1Q68DK7 614 aa13□□□□□ -0.33
PTPN2-201ENST00000309660 SRRTQ9BXP5 876 aaKnown RBP13□□□□□ -0.33
PTPN2-201ENST00000309660 QTRT2Q9H974 415 aaKnown RBP13□□□□□ -0.33
PTPN2-201ENST00000309660 GYPCP04921 128 aa13□□□□□ -0.33
PTPN2-201ENST00000309660 NEK8Q86SG6 692 aa13□□□□□ -0.33
PTPN2-201ENST00000309660 GPIHBP1Q8IV16 184 aa13□□□□□ -0.33
PTPN2-201ENST00000309660 ACRBPQ8NEB7 543 aa13□□□□□ -0.33
PTPN2-201ENST00000309660 L2HGDHQ9H9P8 463 aa13□□□□□ -0.33
PTPN2-201ENST00000309660 USP40Q9NVE5 1235 aa13□□□□□ -0.33
PTPN2-201ENST00000309660 RWDD2AQ9UIY3 292 aa13□□□□□ -0.33
PTPN2-201ENST00000309660 PHLPP2Q6ZVD8 1323 aa12.99□□□□□ -0.33
PTPN2-201ENST00000309660 IL1R1P14778 569 aa12.99□□□□□ -0.33
PTPN2-201ENST00000309660 ADRA2BP18089 450 aa12.99□□□□□ -0.33
PTPN2-201ENST00000309660 PDE4DQ08499 809 aa12.99□□□□□ -0.33
PTPN2-201ENST00000309660 STIM1Q13586 685 aa12.99□□□□□ -0.33
PTPN2-201ENST00000309660 SYCP1Q15431 976 aa12.99□□□□□ -0.33
PTPN2-201ENST00000309660 CRY2Q49AN0 593 aa12.99□□□□□ -0.33
PTPN2-201ENST00000309660 POTEDQ86YR6 584 aa12.99□□□□□ -0.33
PTPN2-201ENST00000309660 ZSCAN29Q8IWY8 852 aaPredicted RBP12.99□□□□□ -0.33
PTPN2-201ENST00000309660 TBC1D22AQ8WUA7 517 aa12.99□□□□□ -0.33
PTPN2-201ENST00000309660 ANKS1AQ92625 1134 aa12.99□□□□□ -0.33
PTPN2-201ENST00000309660 ZNF622Q969S3 477 aaKnown RBP eCLIP12.99□□□□□ -0.33
PTPN2-201ENST00000309660 CCDC88AQ3V6T2 1871 aa12.99□□□□□ -0.33
PTPN2-201ENST00000309660 MFAP3LO75121 409 aa12.99□□□□□ -0.33
PTPN2-201ENST00000309660 KRT9P35527 623 aa12.99□□□□□ -0.33
PTPN2-201ENST00000309660 TCP11X2Q5H9J9 407 aa12.99□□□□□ -0.33
PTPN2-201ENST00000309660 KRT25Q7Z3Z0 450 aa12.99□□□□□ -0.33
PTPN2-201ENST00000309660 TMX4Q9H1E5 349 aaPredicted RBP12.99□□□□□ -0.33
PTPN2-201ENST00000309660 MAGEC2Q9UBF1 373 aaPredicted RBP12.99□□□□□ -0.33
PTPN2-201ENST00000309660 TRPC5Q9UL62 973 aaPredicted RBP12.99□□□□□ -0.33
PTPN2-201ENST00000309660 PSMA7O14818 248 aa12.98□□□□□ -0.33
PTPN2-201ENST00000309660 CDK5RAP3Q96JB5 506 aa12.98□□□□□ -0.33
PTPN2-201ENST00000309660 LZTS2Q9BRK4 669 aa12.98□□□□□ -0.33
PTPN2-201ENST00000309660 DBNDD1Q9H9R9 158 aa12.98□□□□□ -0.33
PTPN2-201ENST00000309660 DDX4Q9NQI0 724 aaKnown RBP12.98□□□□□ -0.33
PTPN2-201ENST00000309660 PARP3Q9Y6F1 533 aa12.98□□□□□ -0.33
PTPN2-201ENST00000309660 IDEP14735 1019 aa12.98□□□□□ -0.33
PTPN2-201ENST00000309660 UBE2SQ16763 222 aa12.98□□□□□ -0.33
PTPN2-201ENST00000309660 DYMQ7RTS9 669 aa12.98□□□□□ -0.33
PTPN2-201ENST00000309660 FCHSD1Q86WN1 690 aa12.98□□□□□ -0.33
PTPN2-201ENST00000309660 CNGA4Q8IV77 575 aa12.98□□□□□ -0.33
PTPN2-201ENST00000309660 GJA10Q969M2 543 aa12.98□□□□□ -0.33
PTPN2-201ENST00000309660 ZMYND12Q9H0C1 365 aa12.98□□□□□ -0.33
PTPN2-201ENST00000309660 EXOC1Q9NV70 894 aa12.98□□□□□ -0.33
PTPN2-201ENST00000309660 RNF225M0QZC1 329 aaPredicted RBP12.98□□□□□ -0.33
PTPN2-201ENST00000309660 PDHBP11177 359 aa12.98□□□□□ -0.33
PTPN2-201ENST00000309660 SPAG1Q07617 926 aa12.98□□□□□ -0.33
PTPN2-201ENST00000309660 ZNF569Q5MCW4 686 aa12.98□□□□□ -0.33
PTPN2-201ENST00000309660 TTBK2Q6IQ55 1244 aa12.98□□□□□ -0.33
PTPN2-201ENST00000309660 KCTD1Q719H9 257 aa12.98□□□□□ -0.33
PTPN2-201ENST00000309660 KIAA0825Q8IV33 1275 aa12.98□□□□□ -0.33
PTPN2-201ENST00000309660 LRRC15Q8TF66 581 aa12.98□□□□□ -0.33
PTPN2-201ENST00000309660 SLF1Q9BQI6 1058 aa12.98□□□□□ -0.33
PTPN2-201ENST00000309660 SPZ1Q9BXG8 430 aa12.98□□□□□ -0.33
PTPN2-201ENST00000309660 CASZ1Q86V15 1759 aa12.98□□□□□ -0.33
PTPN2-201ENST00000309660 ROBO3Q96MS0 1386 aa12.98□□□□□ -0.33
PTPN2-201ENST00000309660 GOLGA6L9A6NEM1 432 aa12.97□□□□□ -0.33
PTPN2-201ENST00000309660 M0R2N6 131 aa12.97□□□□□ -0.33
PTPN2-201ENST00000309660 TDP2O95551 362 aa12.97□□□□□ -0.33
PTPN2-201ENST00000309660 SSBP05455 408 aaKnown RBP eCLIP12.97□□□□□ -0.33
PTPN2-201ENST00000309660 HSPA1LP34931 641 aa12.97□□□□□ -0.33
PTPN2-201ENST00000309660 GALNT17Q6IS24 598 aa12.97□□□□□ -0.33
PTPN2-201ENST00000309660 TMED8Q6PL24 325 aaPredicted RBP12.97□□□□□ -0.33
PTPN2-201ENST00000309660 CERS5Q8N5B7 392 aa12.97□□□□□ -0.33
PTPN2-201ENST00000309660 CSGALNACT2Q8N6G5 542 aa12.97□□□□□ -0.33
PTPN2-201ENST00000309660 CCDC47Q96A33 483 aaKnown RBP12.97□□□□□ -0.33
PTPN2-201ENST00000309660 SPATA31A6Q5VVP1 1343 aa12.97□□□□□ -0.33
PTPN2-201ENST00000309660 SNED1Q8TER0 1413 aa12.97□□□□□ -0.33
PTPN2-201ENST00000309660 POLRMTO00411 1230 aaKnown RBP12.97□□□□□ -0.33
PTPN2-201ENST00000309660 KIF5CO60282 957 aa12.97□□□□□ -0.33
PTPN2-201ENST00000309660 FCER1AP12319 257 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms