RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 MYH8P13535 1937 aa9.2□□□□□ -0.94
PCDHB1-201ENST00000306549 ZMYM6O95789 1325 aa9.2□□□□□ -0.94
PCDHB1-201ENST00000306549 WDR19Q8NEZ3 1342 aa9.2□□□□□ -0.94
PCDHB1-201ENST00000306549 CTAGE9A4FU28 777 aa9.2□□□□□ -0.94
PCDHB1-201ENST00000306549 H7C1W4 665 aa9.2□□□□□ -0.94
PCDHB1-201ENST00000306549 TUBBP07437 444 aa9.2□□□□□ -0.94
PCDHB1-201ENST00000306549 DMP1Q13316 513 aaPredicted RBP9.2□□□□□ -0.94
PCDHB1-201ENST00000306549 CCDC42Q96M95 316 aa9.2□□□□□ -0.94
PCDHB1-201ENST00000306549 NUF2Q9BZD4 464 aa9.2□□□□□ -0.94
PCDHB1-201ENST00000306549 KLRF2D3W0D1 207 aa9.19□□□□□ -0.94
PCDHB1-201ENST00000306549 RPLP2P05387 115 aaKnown RBP9.19□□□□□ -0.94
PCDHB1-201ENST00000306549 GTF3C6Q969F1 213 aa9.19□□□□□ -0.94
PCDHB1-201ENST00000306549 CETN3O15182 167 aa9.19□□□□□ -0.94
PCDHB1-201ENST00000306549 BMP3P12645 472 aa9.19□□□□□ -0.94
PCDHB1-201ENST00000306549 CCND2P30279 289 aa9.19□□□□□ -0.94
PCDHB1-201ENST00000306549 ALCAMQ13740 583 aa9.19□□□□□ -0.94
PCDHB1-201ENST00000306549 ARFGAP2Q8N6H7 521 aa9.19□□□□□ -0.94
PCDHB1-201ENST00000306549 LARSQ9P2J5 1176 aaKnown RBP9.19□□□□□ -0.94
PCDHB1-201ENST00000306549 GOLGA8CPA6NN73 597 aa9.19□□□□□ -0.94
PCDHB1-201ENST00000306549 APOBRQ0VD83 1088 aa9.19□□□□□ -0.94
PCDHB1-201ENST00000306549 MTX1Q13505 466 aa9.19□□□□□ -0.94
PCDHB1-201ENST00000306549 TTC38Q5R3I4 469 aa9.19□□□□□ -0.94
PCDHB1-201ENST00000306549 SH2D4BQ5SQS7 431 aa9.19□□□□□ -0.94
PCDHB1-201ENST00000306549 SYNE4Q8N205 404 aa9.19□□□□□ -0.94
PCDHB1-201ENST00000306549 TTLL11Q8NHH1 800 aa9.19□□□□□ -0.94
PCDHB1-201ENST00000306549 ATF5Q9Y2D1 282 aaPredicted RBP9.19□□□□□ -0.94
PCDHB1-201ENST00000306549 ADAMTSL3P82987 1691 aa9.19□□□□□ -0.94
PCDHB1-201ENST00000306549 ESYT2A0FGR8 921 aa9.19□□□□□ -0.94
PCDHB1-201ENST00000306549 ESPNB1AK53 854 aa9.19□□□□□ -0.94
PCDHB1-201ENST00000306549 YARSP54577 528 aaKnown RBP9.19□□□□□ -0.94
PCDHB1-201ENST00000306549 TNNC1P63316 161 aa9.19□□□□□ -0.94
PCDHB1-201ENST00000306549 TRMT1Q9NXH9 659 aaKnown RBP9.19□□□□□ -0.94
PCDHB1-201ENST00000306549 KCNH4Q9UQ05 1017 aa9.19□□□□□ -0.94
PCDHB1-201ENST00000306549 IVLP07476 585 aa9.19□□□□□ -0.94
PCDHB1-201ENST00000306549 POSTNQ15063 836 aa9.19□□□□□ -0.94
PCDHB1-201ENST00000306549 ZNF277Q9NRM2 450 aaPredicted RBP9.19□□□□□ -0.94
PCDHB1-201ENST00000306549 NKIRAS1Q9NYS0 192 aa9.19□□□□□ -0.94
PCDHB1-201ENST00000306549 ANKFY1Q9P2R3 1169 aa9.19□□□□□ -0.94
PCDHB1-201ENST00000306549 E7EWF7 191 aa9.19□□□□□ -0.94
PCDHB1-201ENST00000306549 OATP04181 439 aa9.19□□□□□ -0.94
PCDHB1-201ENST00000306549 ZMYM1Q5SVZ6 1142 aa9.19□□□□□ -0.94
PCDHB1-201ENST00000306549 PKNOX2Q96KN3 472 aa9.19□□□□□ -0.94
PCDHB1-201ENST00000306549 TEKT3Q9BXF9 490 aa9.19□□□□□ -0.94
PCDHB1-201ENST00000306549 FEZ2Q9UHY8 353 aaPredicted RBP9.19□□□□□ -0.94
PCDHB1-201ENST00000306549 PCDHA12Q9UN75 941 aa9.19□□□□□ -0.94
PCDHB1-201ENST00000306549 MYH9P35579 1960 aaKnown RBP9.19□□□□□ -0.94
PCDHB1-201ENST00000306549 RLBP1P12271 317 aa9.18□□□□□ -0.94
PCDHB1-201ENST00000306549 LMNB1P20700 586 aa9.18□□□□□ -0.94
PCDHB1-201ENST00000306549 SARNPP82979 210 aaKnown RBP9.18□□□□□ -0.94
PCDHB1-201ENST00000306549 CDC42EP1Q00587 391 aa9.18□□□□□ -0.94
PCDHB1-201ENST00000306549 PPP1R21Q6ZMI0 780 aa9.18□□□□□ -0.94
PCDHB1-201ENST00000306549 TCP10L2B9ZVM9 353 aa9.18□□□□□ -0.94
PCDHB1-201ENST00000306549 LGSNQ5TDP6 509 aa9.18□□□□□ -0.94
PCDHB1-201ENST00000306549 TRMT2AQ8IZ69 625 aaKnown RBP9.18□□□□□ -0.94
PCDHB1-201ENST00000306549 CCDC26Q8TAB7 109 aa9.18□□□□□ -0.94
PCDHB1-201ENST00000306549 LPAR1Q92633 364 aa9.18□□□□□ -0.94
PCDHB1-201ENST00000306549 STMN2Q93045 179 aa9.18□□□□□ -0.94
PCDHB1-201ENST00000306549 MTIF3Q9H2K0 278 aaKnown RBP9.18□□□□□ -0.94
PCDHB1-201ENST00000306549 FAM8A1Q9UBU6 413 aa9.18□□□□□ -0.94
PCDHB1-201ENST00000306549 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.18□□□□□ -0.94
PCDHB1-201ENST00000306549 ADD2P35612 726 aa9.18□□□□□ -0.94
PCDHB1-201ENST00000306549 ZNF449Q6P9G9 518 aa9.18□□□□□ -0.94
PCDHB1-201ENST00000306549 SELENOSQ9BQE4 189 aa9.18□□□□□ -0.94
PCDHB1-201ENST00000306549 VCX3BQ9H321 246 aa9.18□□□□□ -0.94
PCDHB1-201ENST00000306549 SEPT2Q15019 361 aa9.18□□□□□ -0.94
PCDHB1-201ENST00000306549 FYB2Q5VWT5 728 aa9.18□□□□□ -0.94
PCDHB1-201ENST00000306549 PSPC1Q8WXF1 523 aaKnown RBP9.18□□□□□ -0.94
PCDHB1-201ENST00000306549 LEO1Q8WVC0 666 aaPredicted RBP9.18□□□□□ -0.94
PCDHB1-201ENST00000306549 SEC62Q99442 399 aaKnown RBP9.18□□□□□ -0.94
PCDHB1-201ENST00000306549 VCXQ9H320 206 aa9.18□□□□□ -0.94
PCDHB1-201ENST00000306549 RNF181Q9P0P0 153 aa9.18□□□□□ -0.94
PCDHB1-201ENST00000306549 V9GY48 417 aaPredicted RBP9.18□□□□□ -0.94
PCDHB1-201ENST00000306549 SMCO2A6NFE2 343 aa9.18□□□□□ -0.94
PCDHB1-201ENST00000306549 CASQ2O14958 399 aaPredicted RBP9.18□□□□□ -0.94
PCDHB1-201ENST00000306549 SLC12A2P55011 1212 aa9.18□□□□□ -0.94
PCDHB1-201ENST00000306549 CNGA4Q8IV77 575 aa9.18□□□□□ -0.94
PCDHB1-201ENST00000306549 FAM167AQ96KS9 214 aa9.18□□□□□ -0.94
PCDHB1-201ENST00000306549 PAGR1Q9BTK6 254 aa9.18□□□□□ -0.94
PCDHB1-201ENST00000306549 SAMD15Q9P1V8 674 aa9.18□□□□□ -0.94
PCDHB1-201ENST00000306549 PCDHA1Q9Y5I3 950 aa9.18□□□□□ -0.94
PCDHB1-201ENST00000306549 PPP2R3BQ9Y5P8 575 aa9.18□□□□□ -0.94
PCDHB1-201ENST00000306549 RAD17O75943 681 aa9.18□□□□□ -0.94
PCDHB1-201ENST00000306549 HARSP12081 509 aaKnown RBP9.18□□□□□ -0.94
PCDHB1-201ENST00000306549 PPP2R3AQ06190 1150 aa9.18□□□□□ -0.94
PCDHB1-201ENST00000306549 SF3B3Q15393 1217 aaKnown RBP9.18□□□□□ -0.94
PCDHB1-201ENST00000306549 NCAPG2Q86XI2 1143 aa9.18□□□□□ -0.94
PCDHB1-201ENST00000306549 TMX1Q9H3N1 280 aa9.18□□□□□ -0.94
PCDHB1-201ENST00000306549 FEM1BQ9UK73 627 aa9.18□□□□□ -0.94
PCDHB1-201ENST00000306549 CCDC169A6NNP5 214 aa9.17□□□□□ -0.94
PCDHB1-201ENST00000306549 PPP1R18Q6NYC8 613 aa9.17□□□□□ -0.94
PCDHB1-201ENST00000306549 MIS18BP1Q6P0N0 1132 aa9.17□□□□□ -0.94
PCDHB1-201ENST00000306549 C10orf67Q8IYJ2 551 aa9.17□□□□□ -0.94
PCDHB1-201ENST00000306549 ABI1Q8IZP0 508 aa9.17□□□□□ -0.94
PCDHB1-201ENST00000306549 FAM193BQ96PV7 902 aaPredicted RBP9.17□□□□□ -0.94
PCDHB1-201ENST00000306549 ISCA1Q9BUE6 129 aa9.17□□□□□ -0.94
PCDHB1-201ENST00000306549 HACL1Q9UJ83 578 aa9.17□□□□□ -0.94
PCDHB1-201ENST00000306549 SCG2P13521 617 aa9.17□□□□□ -0.94
PCDHB1-201ENST00000306549 EN1Q05925 392 aaPredicted RBP9.17□□□□□ -0.94
PCDHB1-201ENST00000306549 SURF1Q15526 300 aa9.17□□□□□ -0.94
PCDHB1-201ENST00000306549 USP17L2Q6R6M4 530 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms