RNA–Protein interactions for RNA: ENST00000306256.13

RER1-201, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 5

Gene RER1, Length 695 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-201ENST00000306256 MYADML2A6NDP7 307 aa24.29■■□□□ 1.48
RER1-201ENST00000306256 SNAP25P60880 206 aa24.29■■□□□ 1.48
RER1-201ENST00000306256 FAM160B2Q86V87 743 aa24.29■■□□□ 1.48
RER1-201ENST00000306256 CHURC1Q8WUH1 139 aa24.29■■□□□ 1.48
RER1-201ENST00000306256 STAG1Q8WVM7 1258 aa24.29■■□□□ 1.48
RER1-201ENST00000306256 LNPKQ9C0E8 428 aa24.29■■□□□ 1.48
RER1-201ENST00000306256 ACAD9Q9H845 621 aa24.29■■□□□ 1.48
RER1-201ENST00000306256 HELLSQ9NRZ9 838 aa24.29■■□□□ 1.48
RER1-201ENST00000306256 MTMR10Q9NXD2 777 aa24.29■■□□□ 1.48
RER1-201ENST00000306256 ANAPC4Q9UJX5 808 aa24.29■■□□□ 1.48
RER1-201ENST00000306256 LRRC37A2A6NM11 1700 aa24.29■■□□□ 1.48
RER1-201ENST00000306256 ZNF536O15090 1300 aa24.29■■□□□ 1.48
RER1-201ENST00000306256 ADCY6O43306 1168 aa24.28■■□□□ 1.48
RER1-201ENST00000306256 IRX5P78411 483 aaPredicted RBP24.28■■□□□ 1.48
RER1-201ENST00000306256 CNTN2Q02246 1040 aa24.28■■□□□ 1.48
RER1-201ENST00000306256 ACVR2BQ13705 512 aa24.28■■□□□ 1.48
RER1-201ENST00000306256 PPP4R3BQ5MIZ7 849 aa24.28■■□□□ 1.48
RER1-201ENST00000306256 ARMCX2Q7L311 632 aa24.28■■□□□ 1.48
RER1-201ENST00000306256 RNF146Q9NTX7 359 aa24.28■■□□□ 1.48
RER1-201ENST00000306256 COL6A3P12111 3177 aa24.28■■□□□ 1.48
RER1-201ENST00000306256 PQBP1O60828 265 aaKnown RBP24.27■■□□□ 1.48
RER1-201ENST00000306256 FDX1P10109 184 aa24.27■■□□□ 1.48
RER1-201ENST00000306256 ACLYP53396 1101 aa24.27■■□□□ 1.48
RER1-201ENST00000306256 SHHQ15465 462 aa24.27■■□□□ 1.48
RER1-201ENST00000306256 ALX1Q15699 326 aa24.27■■□□□ 1.48
RER1-201ENST00000306256 C9orf50Q5SZB4 431 aa24.27■■□□□ 1.48
RER1-201ENST00000306256 CCDC174Q6PII3 467 aa24.27■■□□□ 1.48
RER1-201ENST00000306256 KLHDC9Q8NEP7 349 aa24.27■■□□□ 1.48
RER1-201ENST00000306256 TOMM22Q9NS69 142 aa24.27■■□□□ 1.48
RER1-201ENST00000306256 ORC4O43929 436 aa24.26■■□□□ 1.47
RER1-201ENST00000306256 DUSP11O75319 330 aaKnown RBP24.26■■□□□ 1.47
RER1-201ENST00000306256 CLTBP09497 229 aa24.26■■□□□ 1.47
RER1-201ENST00000306256 ALAS1P13196 640 aa24.26■■□□□ 1.47
RER1-201ENST00000306256 ITGB8P26012 769 aa24.26■■□□□ 1.47
RER1-201ENST00000306256 NMIQ13287 307 aaPredicted RBP24.26■■□□□ 1.47
RER1-201ENST00000306256 CCDC144BQ3MJ40 725 aa24.26■■□□□ 1.47
RER1-201ENST00000306256 MCMDC2Q4G0Z9 681 aa24.26■■□□□ 1.47
RER1-201ENST00000306256 RRP12Q5JTH9 1297 aaKnown RBP24.26■■□□□ 1.47
RER1-201ENST00000306256 RCSD1Q6JBY9 416 aa24.26■■□□□ 1.47
RER1-201ENST00000306256 ZNF589Q86UQ0 364 aaPredicted RBP24.26■■□□□ 1.47
RER1-201ENST00000306256 CCDC144CPQ8IYA2 1237 aa24.26■■□□□ 1.47
RER1-201ENST00000306256 TSEN34Q9BSV6 310 aaKnown RBP24.26■■□□□ 1.47
RER1-201ENST00000306256 ABHD16BQ9H3Z7 469 aa24.26■■□□□ 1.47
RER1-201ENST00000306256 A1CFQ9NQ94 594 aaKnown RBP24.26■■□□□ 1.47
RER1-201ENST00000306256 STARD7Q9NQZ5 370 aa24.26■■□□□ 1.47
RER1-201ENST00000306256 PRR12Q9ULL5 1215 aa24.26■■□□□ 1.47
RER1-201ENST00000306256 POTEB2H3BUK9 544 aa24.25■■□□□ 1.47
RER1-201ENST00000306256 FGAP02671 866 aa24.25■■□□□ 1.47
RER1-201ENST00000306256 KCNA10Q16322 511 aa24.25■■□□□ 1.47
RER1-201ENST00000306256 CCDC96Q2M329 555 aa24.25■■□□□ 1.47
RER1-201ENST00000306256 FAM133AQ8N9E0 248 aa24.25■■□□□ 1.47
RER1-201ENST00000306256 SLC17A8Q8NDX2 589 aa24.25■■□□□ 1.47
RER1-201ENST00000306256 TRERF1Q96PN7 1200 aa24.25■■□□□ 1.47
RER1-201ENST00000306256 TRIM6-TRIM34B2RNG4 842 aa24.24■■□□□ 1.47
RER1-201ENST00000306256 PLA2G6O60733 806 aa24.24■■□□□ 1.47
RER1-201ENST00000306256 C6orf222P0C671 652 aaPredicted RBP24.24■■□□□ 1.47
RER1-201ENST00000306256 CCSAPQ6IQ19 270 aaPredicted RBP24.24■■□□□ 1.47
RER1-201ENST00000306256 B4GALNT3Q6L9W6 998 aa24.24■■□□□ 1.47
RER1-201ENST00000306256 KATNBL1Q9H079 304 aa24.24■■□□□ 1.47
RER1-201ENST00000306256 DDX49Q9Y6V7 483 aaKnown RBP24.24■■□□□ 1.47
RER1-201ENST00000306256 FGRP09769 529 aa24.23■■□□□ 1.47
RER1-201ENST00000306256 HSPD1P10809 573 aaKnown RBP24.23■■□□□ 1.47
RER1-201ENST00000306256 HAND2P61296 217 aa24.23■■□□□ 1.47
RER1-201ENST00000306256 MUM1L1Q5H9M0 696 aa24.23■■□□□ 1.47
RER1-201ENST00000306256 TTBK2Q6IQ55 1244 aa24.23■■□□□ 1.47
RER1-201ENST00000306256 RILPL2Q969X0 211 aa24.23■■□□□ 1.47
RER1-201ENST00000306256 STXBP5LQ9Y2K9 1186 aa24.23■■□□□ 1.47
RER1-201ENST00000306256 LAMA4Q16363 1823 aa24.23■■□□□ 1.47
RER1-201ENST00000306256 CCDC171Q6TFL3 1326 aa24.22■■□□□ 1.47
RER1-201ENST00000306256 SOWAHBA6NEL2 793 aa24.22■■□□□ 1.47
RER1-201ENST00000306256 MOXD2PA6NHM9 499 aa24.22■■□□□ 1.47
RER1-201ENST00000306256 CST5P28325 142 aaPredicted RBP24.22■■□□□ 1.47
RER1-201ENST00000306256 NOVP48745 357 aa24.22■■□□□ 1.47
RER1-201ENST00000306256 TKFCQ3LXA3 575 aa24.22■■□□□ 1.47
RER1-201ENST00000306256 NUP133Q8WUM0 1156 aa24.22■■□□□ 1.47
RER1-201ENST00000306256 DCAF4Q8WV16 495 aa24.22■■□□□ 1.47
RER1-201ENST00000306256 FAM161BQ96MY7 647 aa24.22■■□□□ 1.47
RER1-201ENST00000306256 UPF3AQ9H1J1 476 aaKnown RBP24.22■■□□□ 1.47
RER1-201ENST00000306256 ASTN1O14525 1302 aa24.21■■□□□ 1.47
RER1-201ENST00000306256 KIAA0355O15063 1070 aa24.21■■□□□ 1.47
RER1-201ENST00000306256 SLC16A2P36021 539 aa24.21■■□□□ 1.47
RER1-201ENST00000306256 SMC5Q8IY18 1101 aa24.21■■□□□ 1.47
RER1-201ENST00000306256 TMEM47Q9BQJ4 181 aa24.21■■□□□ 1.47
RER1-201ENST00000306256 TMEM39AQ9NV64 488 aa24.21■■□□□ 1.47
RER1-201ENST00000306256 CCPG1Q9ULG6 757 aa24.21■■□□□ 1.47
RER1-201ENST00000306256 LAMA2P24043 3122 aaKnown RBP24.21■■□□□ 1.47
RER1-201ENST00000306256 ZMYM6O95789 1325 aa24.2■■□□□ 1.46
RER1-201ENST00000306256 FRMPD2Q68DX3 1309 aaPredicted RBP24.2■■□□□ 1.46
RER1-201ENST00000306256 C11orf97A0A1B0GVM6 126 aaPredicted RBP24.2■■□□□ 1.46
RER1-201ENST00000306256 RAG1P15918 1043 aa24.2■■□□□ 1.46
RER1-201ENST00000306256 EPHB4P54760 987 aa24.2■■□□□ 1.46
RER1-201ENST00000306256 GJA9P57773 515 aa24.2■■□□□ 1.46
RER1-201ENST00000306256 FAAP100Q0VG06 881 aa24.2■■□□□ 1.46
RER1-201ENST00000306256 ANKRD33Q7Z3H0 272 aa24.2■■□□□ 1.46
RER1-201ENST00000306256 GLT1D1Q96MS3 346 aa24.2■■□□□ 1.46
RER1-201ENST00000306256 GUCD1Q96NT3 240 aa24.2■■□□□ 1.46
RER1-201ENST00000306256 SPC25Q9HBM1 224 aa24.2■■□□□ 1.46
RER1-201ENST00000306256 DCDC2CA8MYV0 355 aa24.19■■□□□ 1.46
RER1-201ENST00000306256 ASGR1P07306 291 aa24.19■■□□□ 1.46
RER1-201ENST00000306256 TOP1P11387 765 aaKnown RBP24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms