RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 REPS2Q8NFH8 660 aa31.42■■■□□ 2.62
HDAC3-201ENST00000305264 PARK7Q99497 189 aaKnown RBP31.42■■■□□ 2.62
HDAC3-201ENST00000305264 ZSCAN21Q9Y5A6 473 aaPredicted RBP31.42■■■□□ 2.62
HDAC3-201ENST00000305264 ZBTB5O15062 677 aa31.41■■■□□ 2.62
HDAC3-201ENST00000305264 CCDC174Q6PII3 467 aa31.41■■■□□ 2.62
HDAC3-201ENST00000305264 LBX2Q6XYB7 198 aa31.41■■■□□ 2.62
HDAC3-201ENST00000305264 SMCR8Q8TEV9 937 aaPredicted RBP31.41■■■□□ 2.62
HDAC3-201ENST00000305264 ORC3Q9UBD5 711 aaPredicted RBP31.41■■■□□ 2.62
HDAC3-201ENST00000305264 SMCHD1A6NHR9 2005 aa31.41■■■□□ 2.62
HDAC3-201ENST00000305264 PPP1R11O60927 126 aaPredicted RBP31.41■■■□□ 2.62
HDAC3-201ENST00000305264 PKN1Q16512 942 aa31.41■■■□□ 2.62
HDAC3-201ENST00000305264 OTUD7BQ6GQQ9 843 aa31.41■■■□□ 2.62
HDAC3-201ENST00000305264 INTS4Q96HW7 963 aaKnown RBP31.41■■■□□ 2.62
HDAC3-201ENST00000305264 SEC63Q9UGP8 760 aaKnown RBP31.41■■■□□ 2.62
HDAC3-201ENST00000305264 TAL1P17542 331 aaPredicted RBP31.4■■■□□ 2.62
HDAC3-201ENST00000305264 AKAP17AQ02040 695 aaKnown RBP31.4■■■□□ 2.62
HDAC3-201ENST00000305264 TAF1CQ15572 869 aaPredicted RBP31.4■■■□□ 2.62
HDAC3-201ENST00000305264 ZNF536O15090 1300 aa31.4■■■□□ 2.62
HDAC3-201ENST00000305264 HSP90AA1P07900 732 aaKnown RBP31.39■■■□□ 2.62
HDAC3-201ENST00000305264 AIFM3Q96NN9 605 aa31.39■■■□□ 2.62
HDAC3-201ENST00000305264 PNMA6FA0A0J9YX94 578 aa31.39■■■□□ 2.62
HDAC3-201ENST00000305264 ZBED4O75132 1171 aa31.39■■■□□ 2.62
HDAC3-201ENST00000305264 TMEM132BQ14DG7 1078 aa31.39■■■□□ 2.62
HDAC3-201ENST00000305264 REM2Q8IYK8 340 aaPredicted RBP31.39■■■□□ 2.62
HDAC3-201ENST00000305264 BTBD7Q9P203 1132 aa31.39■■■□□ 2.62
HDAC3-201ENST00000305264 SMC3Q9UQE7 1217 aa31.39■■■□□ 2.62
HDAC3-201ENST00000305264 DEXIO95424 95 aa31.38■■■□□ 2.61
HDAC3-201ENST00000305264 GPKOWQ92917 476 aaPredicted RBP eCLIP31.38■■■□□ 2.615e-7■■■□□ 17.4
HDAC3-201ENST00000305264 PAGR1Q9BTK6 254 aa31.38■■■□□ 2.61
HDAC3-201ENST00000305264 RAVER2Q9HCJ3 691 aaKnown RBP31.38■■■□□ 2.61
HDAC3-201ENST00000305264 TXNRD2Q9NNW7 524 aa31.38■■■□□ 2.61
HDAC3-201ENST00000305264 RBM27Q9P2N5 1060 aaKnown RBP31.38■■■□□ 2.61
HDAC3-201ENST00000305264 CNMDO75829 334 aa31.37■■■□□ 2.61
HDAC3-201ENST00000305264 FDX1P10109 184 aa31.37■■■□□ 2.61
HDAC3-201ENST00000305264 GJB2P29033 226 aa31.37■■■□□ 2.61
HDAC3-201ENST00000305264 HMGN5P82970 282 aaKnown RBP31.37■■■□□ 2.61
HDAC3-201ENST00000305264 PFKFB3Q16875 520 aaPredicted RBP31.37■■■□□ 2.61
HDAC3-201ENST00000305264 CPXCR1Q8N123 301 aa31.37■■■□□ 2.61
HDAC3-201ENST00000305264 ZNF214Q9UL59 606 aaPredicted RBP31.37■■■□□ 2.61
HDAC3-201ENST00000305264 CTDP1Q9Y5B0 961 aaPredicted RBP31.37■■■□□ 2.61
HDAC3-201ENST00000305264 ADGRA2Q96PE1 1338 aa31.37■■■□□ 2.61
HDAC3-201ENST00000305264 SCG2P13521 617 aa31.37■■■□□ 2.61
HDAC3-201ENST00000305264 MB21D1Q8N884 522 aa31.37■■■□□ 2.61
HDAC3-201ENST00000305264 RBPJLQ9UBG7 517 aa31.37■■■□□ 2.61
HDAC3-201ENST00000305264 WWC2Q6AWC2 1192 aa31.36■■■□□ 2.61
HDAC3-201ENST00000305264 AGBL1Q96MI9 1066 aa31.36■■■□□ 2.61
HDAC3-201ENST00000305264 USH1GQ495M9 461 aa31.36■■■□□ 2.61
HDAC3-201ENST00000305264 HEATR3Q7Z4Q2 680 aa31.36■■■□□ 2.61
HDAC3-201ENST00000305264 ICAM1P05362 532 aa31.35■■■□□ 2.61
HDAC3-201ENST00000305264 CRHR2Q13324 411 aa31.35■■■□□ 2.61
HDAC3-201ENST00000305264 FBXO11Q86XK2 927 aa31.35■■■□□ 2.61
HDAC3-201ENST00000305264 GTF3C2Q8WUA4 911 aaPredicted RBP31.34■■■□□ 2.61
HDAC3-201ENST00000305264 COA7Q96BR5 231 aa31.34■■■□□ 2.61
HDAC3-201ENST00000305264 AMNQ9BXJ7 453 aa31.34■■■□□ 2.61
HDAC3-201ENST00000305264 PLS1Q14651 629 aa31.34■■■□□ 2.61
HDAC3-201ENST00000305264 ANKRD13CQ8N6S4 541 aa31.34■■■□□ 2.61
HDAC3-201ENST00000305264 SHISA4Q96DD7 197 aa31.34■■■□□ 2.61
HDAC3-201ENST00000305264 CCPG1Q9ULG6 757 aa31.34■■■□□ 2.61
HDAC3-201ENST00000305264 RABGAP1Q9Y3P9 1069 aa31.34■■■□□ 2.61
HDAC3-201ENST00000305264 ATP2A1O14983 1001 aa31.33■■■□□ 2.61
HDAC3-201ENST00000305264 ALDH1A1P00352 501 aa31.33■■■□□ 2.61
HDAC3-201ENST00000305264 GCLCP48506 637 aaPredicted RBP31.33■■■□□ 2.61
HDAC3-201ENST00000305264 OAZ1P54368 228 aa31.33■■■□□ 2.61
HDAC3-201ENST00000305264 SNRNP48Q6IEG0 339 aaKnown RBP31.33■■■□□ 2.61
HDAC3-201ENST00000305264 TYW1BQ6NUM6 668 aa31.33■■■□□ 2.61
HDAC3-201ENST00000305264 FAM184AQ8NB25 1140 aa31.33■■■□□ 2.61
HDAC3-201ENST00000305264 ALG1Q9BT22 464 aa31.33■■■□□ 2.61
HDAC3-201ENST00000305264 CA12O43570 354 aa31.32■■■□□ 2.6
HDAC3-201ENST00000305264 FOSBP53539 338 aa31.32■■■□□ 2.6
HDAC3-201ENST00000305264 TEX13BQ9BXU2 312 aa31.32■■■□□ 2.6
HDAC3-201ENST00000305264 ZFYVE28Q9HCC9 887 aa31.32■■■□□ 2.6
HDAC3-201ENST00000305264 GJB4Q9NTQ9 266 aa31.32■■■□□ 2.6
HDAC3-201ENST00000305264 PCDHA1Q9Y5I3 950 aa31.32■■■□□ 2.6
HDAC3-201ENST00000305264 STXBP3O00186 592 aa31.32■■■□□ 2.6
HDAC3-201ENST00000305264 SPATC1LQ9H0A9 340 aa31.32■■■□□ 2.6
HDAC3-201ENST00000305264 VPS54Q9P1Q0 977 aa31.32■■■□□ 2.6
HDAC3-201ENST00000305264 CPA4Q9UI42 421 aa31.32■■■□□ 2.6
HDAC3-201ENST00000305264 TLR2O60603 784 aa31.31■■■□□ 2.6
HDAC3-201ENST00000305264 Q3C1V9 767 aa31.31■■■□□ 2.6
HDAC3-201ENST00000305264 WASF1Q92558 559 aa31.31■■■□□ 2.6
HDAC3-201ENST00000305264 BARHL2Q9NY43 387 aa31.31■■■□□ 2.6
HDAC3-201ENST00000305264 RIPK3Q9Y572 518 aa31.31■■■□□ 2.6
HDAC3-201ENST00000305264 STAT3P40763 770 aa31.3■■■□□ 2.6
HDAC3-201ENST00000305264 ERVK-9P63128 1117 aa31.3■■■□□ 2.6
HDAC3-201ENST00000305264 ERVK-24P63145 666 aa31.3■■■□□ 2.6
HDAC3-201ENST00000305264 DNAJC5GQ8N7S2 189 aa31.3■■■□□ 2.6
HDAC3-201ENST00000305264 R3HDMLQ9H3Y0 253 aa31.3■■■□□ 2.6
HDAC3-201ENST00000305264 HOMER2Q9NSB8 354 aa31.3■■■□□ 2.6
HDAC3-201ENST00000305264 MORF4L1Q9UBU8 362 aa31.3■■■□□ 2.6
HDAC3-201ENST00000305264 RNF186Q9NXI6 227 aa31.29■■■□□ 2.6
HDAC3-201ENST00000305264 hCG_1984214I3L0E3 225 aa31.28■■■□□ 2.6
HDAC3-201ENST00000305264 BCRP11274 1271 aa31.28■■■□□ 2.6
HDAC3-201ENST00000305264 ALAS1P13196 640 aa31.28■■■□□ 2.6
HDAC3-201ENST00000305264 ZNF713Q8N859 430 aaPredicted RBP31.28■■■□□ 2.6
HDAC3-201ENST00000305264 DAXXQ9UER7 740 aaPredicted RBP31.28■■■□□ 2.6
HDAC3-201ENST00000305264 NAPAP54920 295 aa31.28■■■□□ 2.6
HDAC3-201ENST00000305264 FAM110CQ1W6H9 321 aa31.28■■■□□ 2.6
HDAC3-201ENST00000305264 GPRC5AQ8NFJ5 357 aa31.28■■■□□ 2.6
HDAC3-201ENST00000305264 IPO9Q96P70 1041 aaKnown RBP31.28■■■□□ 2.6
HDAC3-201ENST00000305264 MOV10L1Q9BXT6 1211 aaKnown RBP31.28■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms