RNA–Protein interactions for RNA: ENST00000303758.7

HMGN1P35-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 35, humanhuman

BASIC

Gene HMGN1P35, Length 594 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P35-201ENST00000303758 TMEM47Q9BQJ4 181 aa12.8□□□□□ -0.36
HMGN1P35-201ENST00000303758 ACAD9Q9H845 621 aa12.8□□□□□ -0.36
HMGN1P35-201ENST00000303758 RNF146Q9NTX7 359 aa12.8□□□□□ -0.36
HMGN1P35-201ENST00000303758 NRBP1Q9UHY1 535 aa12.8□□□□□ -0.36
HMGN1P35-201ENST00000303758 CTNNA3Q9UI47 895 aa12.8□□□□□ -0.36
HMGN1P35-201ENST00000303758 MCM3APO60318 1980 aa12.8□□□□□ -0.36
HMGN1P35-201ENST00000303758 PLA2G6O60733 806 aa12.79□□□□□ -0.36
HMGN1P35-201ENST00000303758 IGHA2P01877 340 aa12.79□□□□□ -0.36
HMGN1P35-201ENST00000303758 ALAS1P13196 640 aa12.79□□□□□ -0.36
HMGN1P35-201ENST00000303758 AKR1A1P14550 325 aa12.79□□□□□ -0.36
HMGN1P35-201ENST00000303758 SYN1P17600 705 aa12.79□□□□□ -0.36
HMGN1P35-201ENST00000303758 PDE4AP27815 886 aa12.79□□□□□ -0.36
HMGN1P35-201ENST00000303758 IQCA1Q86XH1 822 aa12.79□□□□□ -0.36
HMGN1P35-201ENST00000303758 MSL3Q8N5Y2 521 aaKnown RBP12.79□□□□□ -0.36
HMGN1P35-201ENST00000303758 AGBL1Q96MI9 1066 aa12.79□□□□□ -0.36
HMGN1P35-201ENST00000303758 DSCC1Q9BVC3 393 aa12.79□□□□□ -0.36
HMGN1P35-201ENST00000303758 XPNPEP3Q9NQH7 507 aa12.79□□□□□ -0.36
HMGN1P35-201ENST00000303758 TCP11L1Q9NUJ3 509 aa12.79□□□□□ -0.36
HMGN1P35-201ENST00000303758 RBM27Q9P2N5 1060 aaKnown RBP12.79□□□□□ -0.36
HMGN1P35-201ENST00000303758 ZHX1Q9UKY1 873 aaPredicted RBP12.79□□□□□ -0.36
HMGN1P35-201ENST00000303758 PRR12Q9ULL5 1215 aa12.79□□□□□ -0.36
HMGN1P35-201ENST00000303758 NEDD4P46934 1319 aa12.79□□□□□ -0.36
HMGN1P35-201ENST00000303758 FRMPD2Q68DX3 1309 aaPredicted RBP12.79□□□□□ -0.36
HMGN1P35-201ENST00000303758 SYNGAP1Q96PV0 1343 aa12.79□□□□□ -0.36
HMGN1P35-201ENST00000303758 GSPT1P15170 499 aaKnown RBP12.78□□□□□ -0.36
HMGN1P35-201ENST00000303758 NOVP48745 357 aa12.78□□□□□ -0.36
HMGN1P35-201ENST00000303758 NT5C2P49902 561 aa12.78□□□□□ -0.36
HMGN1P35-201ENST00000303758 ATN1P54259 1190 aaPredicted RBP12.78□□□□□ -0.36
HMGN1P35-201ENST00000303758 SNAP25P60880 206 aa12.78□□□□□ -0.36
HMGN1P35-201ENST00000303758 LRRC26Q2I0M4 334 aa12.78□□□□□ -0.36
HMGN1P35-201ENST00000303758 TKFCQ3LXA3 575 aa12.78□□□□□ -0.36
HMGN1P35-201ENST00000303758 RUFY2Q8WXA3 655 aa12.78□□□□□ -0.36
HMGN1P35-201ENST00000303758 TTC14Q96N46 770 aa12.78□□□□□ -0.36
HMGN1P35-201ENST00000303758 TRERF1Q96PN7 1200 aa12.78□□□□□ -0.36
HMGN1P35-201ENST00000303758 ZKSCAN3Q9BRR0 538 aa12.78□□□□□ -0.36
HMGN1P35-201ENST00000303758 GPCPD1Q9NPB8 672 aa12.78□□□□□ -0.36
HMGN1P35-201ENST00000303758 CCPG1Q9ULG6 757 aa12.78□□□□□ -0.36
HMGN1P35-201ENST00000303758 RAD50Q92878 1312 aa12.78□□□□□ -0.36
HMGN1P35-201ENST00000303758 SMCHD1A6NHR9 2005 aa12.78□□□□□ -0.36
HMGN1P35-201ENST00000303758 LRRC37A2A6NM11 1700 aa12.77□□□□□ -0.36
HMGN1P35-201ENST00000303758 DNAJC25-GNG10A0A024R161 153 aa12.77□□□□□ -0.37
HMGN1P35-201ENST00000303758 POTEB2H3BUK9 544 aa12.77□□□□□ -0.37
HMGN1P35-201ENST00000303758 KDM4AO75164 1064 aa12.77□□□□□ -0.37
HMGN1P35-201ENST00000303758 CCDC178Q5BJE1 867 aa12.77□□□□□ -0.37
HMGN1P35-201ENST00000303758 SYDE2Q5VT97 1194 aa12.77□□□□□ -0.37
HMGN1P35-201ENST00000303758 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.77□□□□□ -0.37
HMGN1P35-201ENST00000303758 ZNF467Q7Z7K2 595 aaPredicted RBP12.77□□□□□ -0.37
HMGN1P35-201ENST00000303758 RNF180Q86T96 592 aa12.77□□□□□ -0.37
HMGN1P35-201ENST00000303758 KAT14Q9H8E8 782 aa12.77□□□□□ -0.37
HMGN1P35-201ENST00000303758 PRKAG2Q9UGJ0 569 aa12.77□□□□□ -0.37
HMGN1P35-201ENST00000303758 RANBP2P49792 3224 aaKnown RBP12.77□□□□□ -0.37
HMGN1P35-201ENST00000303758 MYH6P13533 1939 aa12.76□□□□□ -0.37
HMGN1P35-201ENST00000303758 B4E1Z4 1266 aa12.76□□□□□ -0.37
HMGN1P35-201ENST00000303758 ICAM1P05362 532 aa12.76□□□□□ -0.37
HMGN1P35-201ENST00000303758 ZNF865P0CJ78 1059 aaPredicted RBP12.76□□□□□ -0.37
HMGN1P35-201ENST00000303758 PDHBP11177 359 aa12.76□□□□□ -0.37
HMGN1P35-201ENST00000303758 TAL1P17542 331 aaPredicted RBP12.76□□□□□ -0.37
HMGN1P35-201ENST00000303758 SLC16A2P36021 539 aa12.76□□□□□ -0.37
HMGN1P35-201ENST00000303758 FXR1P51114 621 aaKnown RBP eCLIP12.76□□□□□ -0.37
HMGN1P35-201ENST00000303758 LRRC41Q15345 812 aa12.76□□□□□ -0.37
HMGN1P35-201ENST00000303758 TTBK2Q6IQ55 1244 aa12.76□□□□□ -0.37
HMGN1P35-201ENST00000303758 MAMDC4Q6UXC1 1216 aa12.76□□□□□ -0.37
HMGN1P35-201ENST00000303758 NSMFQ6X4W1 530 aa12.76□□□□□ -0.37
HMGN1P35-201ENST00000303758 KRT23Q9C075 422 aa12.76□□□□□ -0.37
HMGN1P35-201ENST00000303758 RANBP17Q9H2T7 1088 aaKnown RBP12.76□□□□□ -0.37
HMGN1P35-201ENST00000303758 CNNM2Q9H8M5 875 aa12.76□□□□□ -0.37
HMGN1P35-201ENST00000303758 A1CFQ9NQ94 594 aaKnown RBP12.76□□□□□ -0.37
HMGN1P35-201ENST00000303758 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.76□□□□□ -0.37
HMGN1P35-201ENST00000303758 FAM184BQ9ULE4 1060 aa12.76□□□□□ -0.37
HMGN1P35-201ENST00000303758 ATP11BQ9Y2G3 1177 aa12.76□□□□□ -0.37
HMGN1P35-201ENST00000303758 ZNF536O15090 1300 aa12.76□□□□□ -0.37
HMGN1P35-201ENST00000303758 A0A1W2PPC1 479 aa12.75□□□□□ -0.37
HMGN1P35-201ENST00000303758 PGK1P00558 417 aa12.75□□□□□ -0.37
HMGN1P35-201ENST00000303758 LCTP09848 1927 aa12.75□□□□□ -0.37
HMGN1P35-201ENST00000303758 ADCYAP1R1P41586 468 aa12.75□□□□□ -0.37
HMGN1P35-201ENST00000303758 RTP1P59025 263 aa12.75□□□□□ -0.37
HMGN1P35-201ENST00000303758 CNTN2Q02246 1040 aa12.75□□□□□ -0.37
HMGN1P35-201ENST00000303758 ACVR2BQ13705 512 aa12.75□□□□□ -0.37
HMGN1P35-201ENST00000303758 ARMCX2Q7L311 632 aa12.75□□□□□ -0.37
HMGN1P35-201ENST00000303758 DGKHQ86XP1 1220 aa12.75□□□□□ -0.37
HMGN1P35-201ENST00000303758 PNMA1Q8ND90 353 aa12.75□□□□□ -0.37
HMGN1P35-201ENST00000303758 FERMT2Q96AC1 680 aa12.75□□□□□ -0.37
HMGN1P35-201ENST00000303758 LENG1Q96BZ8 264 aaPredicted RBP12.75□□□□□ -0.37
HMGN1P35-201ENST00000303758 UBAC1Q9BSL1 405 aa12.75□□□□□ -0.37
HMGN1P35-201ENST00000303758 ABHD16BQ9H3Z7 469 aa12.75□□□□□ -0.37
HMGN1P35-201ENST00000303758 SPC25Q9HBM1 224 aa12.75□□□□□ -0.37
HMGN1P35-201ENST00000303758 LTBP2Q14767 1821 aa12.74□□□□□ -0.37
HMGN1P35-201ENST00000303758 TNKSO95271 1327 aa12.74□□□□□ -0.37
HMGN1P35-201ENST00000303758 SYNRGQ9UMZ2 1314 aa12.74□□□□□ -0.37
HMGN1P35-201ENST00000303758 ASB14A6NK59 587 aa12.74□□□□□ -0.37
HMGN1P35-201ENST00000303758 SNAI1O95863 264 aaPredicted RBP12.74□□□□□ -0.37
HMGN1P35-201ENST00000303758 MAGEA10P43363 369 aaPredicted RBP12.74□□□□□ -0.37
HMGN1P35-201ENST00000303758 ZNF543Q08ER8 600 aa12.74□□□□□ -0.37
HMGN1P35-201ENST00000303758 TRDNQ13061 729 aa12.74□□□□□ -0.37
HMGN1P35-201ENST00000303758 MUM1L1Q5H9M0 696 aa12.74□□□□□ -0.37
HMGN1P35-201ENST00000303758 GPATCH4Q5T3I0 446 aaKnown RBP12.74□□□□□ -0.37
HMGN1P35-201ENST00000303758 BTNL9Q6UXG8 535 aa12.74□□□□□ -0.37
HMGN1P35-201ENST00000303758 SLC39A5Q6ZMH5 540 aa12.74□□□□□ -0.37
HMGN1P35-201ENST00000303758 CCDC144CPQ8IYA2 1237 aa12.74□□□□□ -0.37
HMGN1P35-201ENST00000303758 ZSCAN10Q96SZ4 725 aaPredicted RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms