RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 GMCL1Q96IK5 515 aa25.4■■□□□ 1.66
SMAD1-201ENST00000302085 ADCY7P51828 1080 aa25.39■■□□□ 1.66
SMAD1-201ENST00000302085 NONOQ15233 471 aaKnown RBP eCLIP25.39■■□□□ 1.66
SMAD1-201ENST00000302085 ARL6IP4Q66PJ3 421 aaKnown RBP25.39■■□□□ 1.66
SMAD1-201ENST00000302085 SYMPKQ92797 1274 aaKnown RBP25.39■■□□□ 1.66
SMAD1-201ENST00000302085 NUP88Q99567 741 aaPredicted RBP25.39■■□□□ 1.66
SMAD1-201ENST00000302085 TMEM260Q9NX78 707 aa25.39■■□□□ 1.66
SMAD1-201ENST00000302085 A0A087X0B3 334 aa25.38■■□□□ 1.65
SMAD1-201ENST00000302085 BIN1O00499 593 aa25.38■■□□□ 1.65
SMAD1-201ENST00000302085 FOXN1O15353 648 aa25.38■■□□□ 1.65
SMAD1-201ENST00000302085 JAKMIP3Q5VZ66 844 aa25.38■■□□□ 1.65
SMAD1-201ENST00000302085 REXO1Q8N1G1 1221 aaKnown RBP25.38■■□□□ 1.65
SMAD1-201ENST00000302085 PDILTQ8N807 584 aa25.38■■□□□ 1.65
SMAD1-201ENST00000302085 SCAF8Q9UPN6 1271 aaKnown RBP25.38■■□□□ 1.65
SMAD1-201ENST00000302085 ACTN4O43707 911 aaKnown RBP25.38■■□□□ 1.65
SMAD1-201ENST00000302085 NLRP12P59046 1061 aa25.38■■□□□ 1.65
SMAD1-201ENST00000302085 MAP3K10Q02779 954 aa25.38■■□□□ 1.65
SMAD1-201ENST00000302085 PPP1R18Q6NYC8 613 aa25.38■■□□□ 1.65
SMAD1-201ENST00000302085 DPF2Q92785 391 aa25.38■■□□□ 1.65
SMAD1-201ENST00000302085 GJA3Q9Y6H8 435 aa25.38■■□□□ 1.65
SMAD1-201ENST00000302085 MICALL2Q8IY33 904 aa25.37■■□□□ 1.65
SMAD1-201ENST00000302085 TMEM60Q9H2L4 133 aa25.37■■□□□ 1.65
SMAD1-201ENST00000302085 ZBTB21Q9ULJ3 1066 aa25.37■■□□□ 1.65
SMAD1-201ENST00000302085 SYNPO2Q9UMS6 1093 aa25.37■■□□□ 1.65
SMAD1-201ENST00000302085 ARFGEF1Q9Y6D6 1849 aa25.37■■□□□ 1.65
SMAD1-201ENST00000302085 RASA3Q14644 834 aa25.36■■□□□ 1.65
SMAD1-201ENST00000302085 QRICH1Q2TAL8 776 aa25.36■■□□□ 1.65
SMAD1-201ENST00000302085 DPCR1Q3MIW9 517 aa25.36■■□□□ 1.65
SMAD1-201ENST00000302085 ACER1Q8TDN7 264 aa25.36■■□□□ 1.65
SMAD1-201ENST00000302085 RIC8AQ9NPQ8 531 aa25.36■■□□□ 1.65
SMAD1-201ENST00000302085 CNOT7Q9UIV1 285 aaKnown RBP25.36■■□□□ 1.65
SMAD1-201ENST00000302085 ECE1P42892 770 aa25.36■■□□□ 1.65
SMAD1-201ENST00000302085 PLCB2Q00722 1185 aa25.36■■□□□ 1.65
SMAD1-201ENST00000302085 SAMD7Q7Z3H4 446 aa25.36■■□□□ 1.65
SMAD1-201ENST00000302085 CEP57L1Q8IYX8 460 aa25.36■■□□□ 1.65
SMAD1-201ENST00000302085 TNNI2P48788 182 aa25.35■■□□□ 1.65
SMAD1-201ENST00000302085 ZRSR1Q15695 479 aaKnown RBP25.35■■□□□ 1.65
SMAD1-201ENST00000302085 DHX40Q8IX18 779 aaKnown RBP25.35■■□□□ 1.65
SMAD1-201ENST00000302085 PCDHA5Q9Y5H7 936 aa25.35■■□□□ 1.65
SMAD1-201ENST00000302085 BMP3P12645 472 aa25.35■■□□□ 1.65
SMAD1-201ENST00000302085 CAP2P40123 477 aa25.35■■□□□ 1.65
SMAD1-201ENST00000302085 NEK8Q86SG6 692 aa25.35■■□□□ 1.65
SMAD1-201ENST00000302085 TBCKQ8TEA7 893 aa25.35■■□□□ 1.65
SMAD1-201ENST00000302085 TEPSINQ96N21 525 aa25.35■■□□□ 1.65
SMAD1-201ENST00000302085 ARHGEF10LQ9HCE6 1279 aa25.35■■□□□ 1.65
SMAD1-201ENST00000302085 TMX2Q9Y320 296 aa25.35■■□□□ 1.65
SMAD1-201ENST00000302085 ASTN2O75129 1339 aaPredicted RBP25.34■■□□□ 1.65
SMAD1-201ENST00000302085 ZNF541Q9H0D2 1346 aa25.34■■□□□ 1.65
SMAD1-201ENST00000302085 CDC37Q16543 378 aaPredicted RBP25.34■■□□□ 1.65
SMAD1-201ENST00000302085 LETM2Q2VYF4 491 aa25.34■■□□□ 1.65
SMAD1-201ENST00000302085 KIAA1755Q5JYT7 1200 aa25.34■■□□□ 1.65
SMAD1-201ENST00000302085 ISM2Q6H9L7 571 aa25.34■■□□□ 1.65
SMAD1-201ENST00000302085 DHX58Q96C10 678 aa25.34■■□□□ 1.65
SMAD1-201ENST00000302085 TMEM232C9JQI7 657 aa25.33■■□□□ 1.65
SMAD1-201ENST00000302085 LONP1P36776 959 aaKnown RBP25.33■■□□□ 1.65
SMAD1-201ENST00000302085 POSTNQ15063 836 aa25.33■■□□□ 1.65
SMAD1-201ENST00000302085 TBC1D10BQ4KMP7 808 aaPredicted RBP25.33■■□□□ 1.65
SMAD1-201ENST00000302085 BTNL9Q6UXG8 535 aa25.33■■□□□ 1.65
SMAD1-201ENST00000302085 GRAMD1CQ8IYS0 662 aa25.33■■□□□ 1.65
SMAD1-201ENST00000302085 NAT10Q9H0A0 1025 aaKnown RBP25.33■■□□□ 1.65
SMAD1-201ENST00000302085 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.33■■□□□ 1.65
SMAD1-201ENST00000302085 HOOK1Q9UJC3 728 aaKnown RBP25.33■■□□□ 1.65
SMAD1-201ENST00000302085 EDIL3O43854 480 aa25.33■■□□□ 1.64
SMAD1-201ENST00000302085 PRR29P0C7W0 189 aa25.33■■□□□ 1.64
SMAD1-201ENST00000302085 CLK2P49760 499 aaKnown RBP25.33■■□□□ 1.64
SMAD1-201ENST00000302085 KANK3Q6NY19 840 aa25.33■■□□□ 1.64
SMAD1-201ENST00000302085 SPICE1Q8N0Z3 855 aa25.33■■□□□ 1.64
SMAD1-201ENST00000302085 CCNT1O60563 726 aaKnown RBP25.32■■□□□ 1.64
SMAD1-201ENST00000302085 SLFN14P0C7P3 912 aa25.32■■□□□ 1.64
SMAD1-201ENST00000302085 SNAP25P60880 206 aa25.32■■□□□ 1.64
SMAD1-201ENST00000302085 UBE2SQ16763 222 aa25.32■■□□□ 1.64
SMAD1-201ENST00000302085 HS1BP3Q53T59 392 aa25.32■■□□□ 1.64
SMAD1-201ENST00000302085 SYDE2Q5VT97 1194 aa25.32■■□□□ 1.64
SMAD1-201ENST00000302085 DTHD1Q6ZMT9 781 aa25.32■■□□□ 1.64
SMAD1-201ENST00000302085 LAD1O00515 517 aa25.31■■□□□ 1.64
SMAD1-201ENST00000302085 MRPL12P52815 198 aaKnown RBP25.31■■□□□ 1.64
SMAD1-201ENST00000302085 CUL5Q93034 780 aa25.31■■□□□ 1.64
SMAD1-201ENST00000302085 BPIFA3Q9BQP9 254 aa25.31■■□□□ 1.64
SMAD1-201ENST00000302085 PSTPIP2Q9H939 334 aa25.31■■□□□ 1.64
SMAD1-201ENST00000302085 SPON1Q9HCB6 807 aa25.31■■□□□ 1.64
SMAD1-201ENST00000302085 PCDHA1Q9Y5I3 950 aa25.31■■□□□ 1.64
SMAD1-201ENST00000302085 PHF20L1A8MW92 1017 aa25.31■■□□□ 1.64
SMAD1-201ENST00000302085 PRPHP41219 470 aa25.31■■□□□ 1.64
SMAD1-201ENST00000302085 SARSP49591 514 aaKnown RBP25.31■■□□□ 1.64
SMAD1-201ENST00000302085 TNFAIP1Q13829 316 aa25.31■■□□□ 1.64
SMAD1-201ENST00000302085 SH3RF1Q7Z6J0 888 aa25.31■■□□□ 1.64
SMAD1-201ENST00000302085 GOLGA6L19H0YKK7 550 aa25.3■■□□□ 1.64
SMAD1-201ENST00000302085 E2F4Q16254 413 aa25.3■■□□□ 1.64
SMAD1-201ENST00000302085 NT5DC1Q5TFE4 455 aa25.3■■□□□ 1.64
SMAD1-201ENST00000302085 AOPEPQ8N6M6 819 aa25.3■■□□□ 1.64
SMAD1-201ENST00000302085 IKQ13123 557 aaPredicted RBP25.29■■□□□ 1.64
SMAD1-201ENST00000302085 ARHGAP27Q6ZUM4 889 aa25.29■■□□□ 1.64
SMAD1-201ENST00000302085 PAGE5Q96GU1 130 aa25.29■■□□□ 1.64
SMAD1-201ENST00000302085 HACL1Q9UJ83 578 aa25.29■■□□□ 1.64
SMAD1-201ENST00000302085 BECN2A8MW95 431 aa25.29■■□□□ 1.64
SMAD1-201ENST00000302085 CDC25AP30304 524 aa25.29■■□□□ 1.64
SMAD1-201ENST00000302085 KIF4BQ2VIQ3 1234 aa25.29■■□□□ 1.64
SMAD1-201ENST00000302085 GOPCQ9HD26 462 aa25.29■■□□□ 1.64
SMAD1-201ENST00000302085 MAN1B1Q9UKM7 699 aa25.29■■□□□ 1.64
SMAD1-201ENST00000302085 OR52Z1P0C646 297 aa25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms