RNA–Protein interactions for RNA: ENST00000301732.9

ABCA3-201, Transcript of ATP binding cassette subfamily A member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA3, Length 6,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-201ENST00000301732 NAA30Q147X3 362 aaPredicted RBP13.54□□□□□ -0.24
ABCA3-201ENST00000301732 EXT2Q93063 718 aa13.54□□□□□ -0.24
ABCA3-201ENST00000301732 PCIF1Q9H4Z3 704 aa13.54□□□□□ -0.24
ABCA3-201ENST00000301732 SPTLC3Q9NUV7 552 aa13.54□□□□□ -0.24
ABCA3-201ENST00000301732 IL16Q14005 1332 aa13.54□□□□□ -0.24
ABCA3-201ENST00000301732 HAUS3Q68CZ6 603 aa13.54□□□□□ -0.24
ABCA3-201ENST00000301732 INTS9Q9NV88 658 aaKnown RBP13.54□□□□□ -0.24
ABCA3-201ENST00000301732 H7C0C1 242 aa13.54□□□□□ -0.24
ABCA3-201ENST00000301732 CLIC2O15247 247 aa13.54□□□□□ -0.24
ABCA3-201ENST00000301732 ATP5OP48047 213 aa13.54□□□□□ -0.24
ABCA3-201ENST00000301732 SCNN1DP51172 638 aa13.54□□□□□ -0.24
ABCA3-201ENST00000301732 MTMR3Q13615 1198 aa13.54□□□□□ -0.24
ABCA3-201ENST00000301732 CEP70Q8NHQ1 597 aa13.54□□□□□ -0.24
ABCA3-201ENST00000301732 TUBB4BP68371 445 aa13.54□□□□□ -0.24
ABCA3-201ENST00000301732 PHLDB3Q6NSJ2 640 aa13.54□□□□□ -0.24
ABCA3-201ENST00000301732 TPTE2Q6XPS3 522 aa13.54□□□□□ -0.24
ABCA3-201ENST00000301732 SULF1Q8IWU6 871 aa13.54□□□□□ -0.24
ABCA3-201ENST00000301732 RIOK1Q9BRS2 568 aaKnown RBP13.54□□□□□ -0.24
ABCA3-201ENST00000301732 PANK4Q9NVE7 773 aa13.54□□□□□ -0.24
ABCA3-201ENST00000301732 KITP10721 976 aa13.53□□□□□ -0.24
ABCA3-201ENST00000301732 STAT1P42224 750 aa13.53□□□□□ -0.24
ABCA3-201ENST00000301732 RYBPQ8N488 228 aaPredicted RBP13.53□□□□□ -0.24
ABCA3-201ENST00000301732 OR8K1Q8NGG5 319 aa13.53□□□□□ -0.24
ABCA3-201ENST00000301732 GOLGA8KD6RF30 607 aa13.53□□□□□ -0.24
ABCA3-201ENST00000301732 ATF2P15336 505 aa13.53□□□□□ -0.24
ABCA3-201ENST00000301732 NCF2P19878 526 aaPredicted RBP13.53□□□□□ -0.24
ABCA3-201ENST00000301732 TAF11Q15544 211 aa13.53□□□□□ -0.24
ABCA3-201ENST00000301732 ATP2A3Q93084 1043 aa13.53□□□□□ -0.24
ABCA3-201ENST00000301732 ALKBH8Q96BT7 664 aaKnown RBP13.53□□□□□ -0.24
ABCA3-201ENST00000301732 HYOU1Q9Y4L1 999 aa13.53□□□□□ -0.24
ABCA3-201ENST00000301732 K7ENM7 598 aa13.53□□□□□ -0.24
ABCA3-201ENST00000301732 XRCC5P13010 732 aaKnown RBP13.53□□□□□ -0.24
ABCA3-201ENST00000301732 FAM47CQ5HY64 1035 aa13.53□□□□□ -0.24
ABCA3-201ENST00000301732 TBC1D1Q86TI0 1168 aaPredicted RBP13.53□□□□□ -0.24
ABCA3-201ENST00000301732 CFAP36Q96G28 342 aa13.53□□□□□ -0.24
ABCA3-201ENST00000301732 LRGUKQ96M69 825 aa13.53□□□□□ -0.24
ABCA3-201ENST00000301732 POLD4Q9HCU8 107 aa13.53□□□□□ -0.24
ABCA3-201ENST00000301732 PCDHA7Q9UN72 937 aa13.53□□□□□ -0.24
ABCA3-201ENST00000301732 RTCBQ9Y3I0 505 aaKnown RBP13.53□□□□□ -0.24
ABCA3-201ENST00000301732 SPDYE2BA6NHP3 402 aa13.53□□□□□ -0.24
ABCA3-201ENST00000301732 GNGT2O14610 69 aa13.53□□□□□ -0.24
ABCA3-201ENST00000301732 CAPN9O14815 690 aa13.53□□□□□ -0.24
ABCA3-201ENST00000301732 SPDYE6P0CI01 402 aa13.53□□□□□ -0.24
ABCA3-201ENST00000301732 ACTN3Q08043 901 aaPredicted RBP13.53□□□□□ -0.24
ABCA3-201ENST00000301732 DDB1Q16531 1140 aa13.53□□□□□ -0.24
ABCA3-201ENST00000301732 LGSNQ5TDP6 509 aa13.53□□□□□ -0.24
ABCA3-201ENST00000301732 CCDC125Q86Z20 511 aa13.53□□□□□ -0.24
ABCA3-201ENST00000301732 SYCE1Q8N0S2 351 aa13.53□□□□□ -0.24
ABCA3-201ENST00000301732 SYMPKQ92797 1274 aaKnown RBP13.53□□□□□ -0.24
ABCA3-201ENST00000301732 RTEL1Q9NZ71 1219 aa13.53□□□□□ -0.24
ABCA3-201ENST00000301732 SRGAP2O75044 1071 aa13.53□□□□□ -0.24
ABCA3-201ENST00000301732 OLA1Q9NTK5 396 aaKnown RBP13.53□□□□□ -0.24
ABCA3-201ENST00000301732 SYNJ1O43426 1573 aa13.52□□□□□ -0.24
ABCA3-201ENST00000301732 MEIS1O00470 390 aa13.52□□□□□ -0.24
ABCA3-201ENST00000301732 TOM1L1O75674 476 aa13.52□□□□□ -0.24
ABCA3-201ENST00000301732 STAM2O75886 525 aa13.52□□□□□ -0.24
ABCA3-201ENST00000301732 TUBBP07437 444 aa13.52□□□□□ -0.24
ABCA3-201ENST00000301732 DMTNQ08495 405 aa13.52□□□□□ -0.24
ABCA3-201ENST00000301732 TRIM50Q86XT4 487 aa13.52□□□□□ -0.24
ABCA3-201ENST00000301732 YIPF3Q9GZM5 350 aa13.52□□□□□ -0.24
ABCA3-201ENST00000301732 DPCR1Q3MIW9 517 aa13.52□□□□□ -0.24
ABCA3-201ENST00000301732 NUDCD3Q8IVD9 361 aa13.52□□□□□ -0.24
ABCA3-201ENST00000301732 GLG1Q92896 1179 aa13.52□□□□□ -0.24
ABCA3-201ENST00000301732 FGD4Q96M96 766 aa13.52□□□□□ -0.24
ABCA3-201ENST00000301732 ZCWPW1Q9H0M4 648 aa13.52□□□□□ -0.24
ABCA3-201ENST00000301732 DNAJC6O75061 913 aa13.52□□□□□ -0.25
ABCA3-201ENST00000301732 PPFIA4O75335 1185 aa13.52□□□□□ -0.25
ABCA3-201ENST00000301732 ADCK5Q3MIX3 580 aa13.52□□□□□ -0.25
ABCA3-201ENST00000301732 GOLGA5Q8TBA6 731 aa13.52□□□□□ -0.25
ABCA3-201ENST00000301732 SPICE1Q8N0Z3 855 aa13.52□□□□□ -0.25
ABCA3-201ENST00000301732 DISC1Q9NRI5 854 aa13.52□□□□□ -0.25
ABCA3-201ENST00000301732 GGT7Q9UJ14 662 aa13.52□□□□□ -0.25
ABCA3-201ENST00000301732 TTC6Q86TZ1 520 aa13.51□□□□□ -0.25
ABCA3-201ENST00000301732 MAML1Q92585 1016 aa13.51□□□□□ -0.25
ABCA3-201ENST00000301732 CARD10Q9BWT7 1032 aa13.51□□□□□ -0.25
ABCA3-201ENST00000301732 ADAM33Q9BZ11 813 aa13.51□□□□□ -0.25
ABCA3-201ENST00000301732 EYA2O00167 538 aa13.51□□□□□ -0.25
ABCA3-201ENST00000301732 RNMTO43148 476 aaKnown RBP13.51□□□□□ -0.25
ABCA3-201ENST00000301732 SART1O43290 800 aaKnown RBP13.51□□□□□ -0.25
ABCA3-201ENST00000301732 KRT10P13645 584 aa13.51□□□□□ -0.25
ABCA3-201ENST00000301732 SMCR8Q8TEV9 937 aaPredicted RBP13.51□□□□□ -0.25
ABCA3-201ENST00000301732 RIC8AQ9NPQ8 531 aa13.51□□□□□ -0.25
ABCA3-201ENST00000301732 GOLGA8SH3BPF8 625 aa13.51□□□□□ -0.25
ABCA3-201ENST00000301732 MSH2P43246 934 aa13.51□□□□□ -0.25
ABCA3-201ENST00000301732 BFSP1Q12934 665 aa13.51□□□□□ -0.25
ABCA3-201ENST00000301732 NOVA2Q9UNW9 492 aaKnown RBP13.51□□□□□ -0.25
ABCA3-201ENST00000301732 SCAF11Q99590 1463 aaKnown RBP13.51□□□□□ -0.25
ABCA3-201ENST00000301732 KCNQ3O43525 872 aa13.51□□□□□ -0.25
ABCA3-201ENST00000301732 HNRNPH2P55795 449 aaKnown RBP13.51□□□□□ -0.25
ABCA3-201ENST00000301732 OSTNP61366 133 aa13.51□□□□□ -0.25
ABCA3-201ENST00000301732 RFX6Q8HWS3 928 aa13.51□□□□□ -0.25
ABCA3-201ENST00000301732 JDP2Q8WYK2 163 aa13.51□□□□□ -0.25
ABCA3-201ENST00000301732 APPBP2Q92624 585 aa13.51□□□□□ -0.25
ABCA3-201ENST00000301732 MAGOHBQ96A72 148 aaKnown RBP13.51□□□□□ -0.25
ABCA3-201ENST00000301732 SMYD3Q9H7B4 428 aa13.51□□□□□ -0.25
ABCA3-201ENST00000301732 GPHNQ9NQX3 736 aaPredicted RBP13.51□□□□□ -0.25
ABCA3-201ENST00000301732 PICK1Q9NRD5 415 aa13.51□□□□□ -0.25
ABCA3-201ENST00000301732 PARP3Q9Y6F1 533 aa13.51□□□□□ -0.25
ABCA3-201ENST00000301732 STMN1P16949 149 aa13.51□□□□□ -0.25
ABCA3-201ENST00000301732 PRPF38AQ8NAV1 312 aaKnown RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms