RNA–Protein interactions for RNA: ENST00000301280.9

CHAF1A-201, Transcript of chromatin assembly factor 1 subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHAF1A, Length 3,339 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-201ENST00000301280 TSR1Q2NL82 804 aaKnown RBP17.57■□□□□ 0.4
CHAF1A-201ENST00000301280 MRPL44Q9H9J2 332 aaKnown RBP17.57■□□□□ 0.4
CHAF1A-201ENST00000301280 ARPP21Q9UBL0 812 aaPredicted RBP17.57■□□□□ 0.4
CHAF1A-201ENST00000301280 BTAF1O14981 1849 aa17.57■□□□□ 0.4
CHAF1A-201ENST00000301280 FOCADQ5VW36 1801 aa17.57■□□□□ 0.4
CHAF1A-201ENST00000301280 CYTH3O43739 400 aa17.57■□□□□ 0.4
CHAF1A-201ENST00000301280 PHACTR2O75167 634 aa17.57■□□□□ 0.4
CHAF1A-201ENST00000301280 CALM1P0DP23 149 aa17.57■□□□□ 0.4
CHAF1A-201ENST00000301280 CALM2P0DP24 149 aa17.57■□□□□ 0.4
CHAF1A-201ENST00000301280 CALM3P0DP25 149 aa17.57■□□□□ 0.4
CHAF1A-201ENST00000301280 FXR1P51114 621 aaKnown RBP eCLIP17.57■□□□□ 0.4
CHAF1A-201ENST00000301280 GYS2P54840 703 aa17.57■□□□□ 0.4
CHAF1A-201ENST00000301280 USH1GQ495M9 461 aa17.57■□□□□ 0.4
CHAF1A-201ENST00000301280 TRIM34Q9BYJ4 488 aa17.57■□□□□ 0.4
CHAF1A-201ENST00000301280 TMX4Q9H1E5 349 aaPredicted RBP17.57■□□□□ 0.4
CHAF1A-201ENST00000301280 THSD7AQ9UPZ6 1657 aa17.57■□□□□ 0.4
CHAF1A-201ENST00000301280 FANCGO15287 622 aa17.56■□□□□ 0.4
CHAF1A-201ENST00000301280 PRCPP42785 496 aa17.56■□□□□ 0.4
CHAF1A-201ENST00000301280 PDE4DQ08499 809 aa17.56■□□□□ 0.4
CHAF1A-201ENST00000301280 WDR66Q8TBY9 1149 aa17.56■□□□□ 0.4
CHAF1A-201ENST00000301280 TCP11L1Q9NUJ3 509 aa17.56■□□□□ 0.4
CHAF1A-201ENST00000301280 POTEMA6NI47 508 aa17.56■□□□□ 0.4
CHAF1A-201ENST00000301280 ZSCAN12O43309 604 aa17.56■□□□□ 0.4
CHAF1A-201ENST00000301280 KLK7P49862 253 aa17.56■□□□□ 0.4
CHAF1A-201ENST00000301280 ST5P78524 1137 aa17.56■□□□□ 0.4
CHAF1A-201ENST00000301280 MORC3Q14149 939 aa17.56■□□□□ 0.4
CHAF1A-201ENST00000301280 C12orf60Q5U649 245 aa17.56■□□□□ 0.4
CHAF1A-201ENST00000301280 ANKRD13CQ8N6S4 541 aa17.56■□□□□ 0.4
CHAF1A-201ENST00000301280 MAGEC2Q9UBF1 373 aaPredicted RBP17.56■□□□□ 0.4
CHAF1A-201ENST00000301280 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.56■□□□□ 0.41e-7■■■■■ 30.4
CHAF1A-201ENST00000301280 FCER1AP12319 257 aa17.55■□□□□ 0.4
CHAF1A-201ENST00000301280 XDHP47989 1333 aa17.55■□□□□ 0.4
CHAF1A-201ENST00000301280 TRIM21P19474 475 aaKnown RBP17.55■□□□□ 0.4
CHAF1A-201ENST00000301280 PAK1Q13153 545 aa17.55■□□□□ 0.4
CHAF1A-201ENST00000301280 MCM6Q14566 821 aa17.55■□□□□ 0.4
CHAF1A-201ENST00000301280 KANK3Q6NY19 840 aa17.55■□□□□ 0.4
CHAF1A-201ENST00000301280 ZNF579Q8NAF0 562 aaKnown RBP17.55■□□□□ 0.4
CHAF1A-201ENST00000301280 TBCKQ8TEA7 893 aa17.55■□□□□ 0.4
CHAF1A-201ENST00000301280 ZCCHC17Q9NP64 241 aaKnown RBP17.55■□□□□ 0.4
CHAF1A-201ENST00000301280 RPN1P04843 607 aaKnown RBP17.55■□□□□ 0.4
CHAF1A-201ENST00000301280 MAPK8IP2Q13387 824 aaPredicted RBP17.55■□□□□ 0.4
CHAF1A-201ENST00000301280 GRAPQ13588 217 aa17.55■□□□□ 0.4
CHAF1A-201ENST00000301280 TERF2Q15554 542 aa17.55■□□□□ 0.4
CHAF1A-201ENST00000301280 BARGINQ6ZT62 677 aa17.55■□□□□ 0.4
CHAF1A-201ENST00000301280 TC2NQ8N9U0 490 aa17.55■□□□□ 0.4
CHAF1A-201ENST00000301280 GRAPLQ8TC17 118 aaPredicted RBP17.55■□□□□ 0.4
CHAF1A-201ENST00000301280 POLLQ9UGP5 575 aa17.55■□□□□ 0.4
CHAF1A-201ENST00000301280 RNF225M0QZC1 329 aaPredicted RBP17.54■□□□□ 0.4
CHAF1A-201ENST00000301280 PMS1P54277 932 aaKnown RBP17.54■□□□□ 0.4
CHAF1A-201ENST00000301280 CYP27A1Q02318 531 aa17.54■□□□□ 0.4
CHAF1A-201ENST00000301280 PPP2R5BQ15173 497 aa17.54■□□□□ 0.4
CHAF1A-201ENST00000301280 KRT31Q15323 416 aa17.54■□□□□ 0.4
CHAF1A-201ENST00000301280 PFKFB3Q16875 520 aaPredicted RBP17.54■□□□□ 0.4
CHAF1A-201ENST00000301280 TXNRD1Q16881 649 aa17.54■□□□□ 0.4
CHAF1A-201ENST00000301280 TMED8Q6PL24 325 aaPredicted RBP17.54■□□□□ 0.4
CHAF1A-201ENST00000301280 NELFCDQ8IXH7 590 aa17.54■□□□□ 0.4
CHAF1A-201ENST00000301280 USP40Q9NVE5 1235 aa17.54■□□□□ 0.4
CHAF1A-201ENST00000301280 MACROD2A1Z1Q3 448 aa17.54■□□□□ 0.4
CHAF1A-201ENST00000301280 B4DLN1 442 aa17.54■□□□□ 0.4
CHAF1A-201ENST00000301280 ZMYND10O75800 440 aa17.54■□□□□ 0.4
CHAF1A-201ENST00000301280 FUT2Q10981 343 aa17.54■□□□□ 0.4
CHAF1A-201ENST00000301280 RAD9BQ6WBX8 426 aa17.54■□□□□ 0.4
CHAF1A-201ENST00000301280 SPATA20Q8TB22 786 aa17.54■□□□□ 0.4
CHAF1A-201ENST00000301280 CHP1Q99653 195 aa17.54■□□□□ 0.4
CHAF1A-201ENST00000301280 CRACR2AQ9BSW2 395 aa17.54■□□□□ 0.4
CHAF1A-201ENST00000301280 FAM207AQ9NSI2 230 aaPredicted RBP17.54■□□□□ 0.4
CHAF1A-201ENST00000301280 TNRC6CQ9HCJ0 1690 aaKnown RBP17.54■□□□□ 0.4
CHAF1A-201ENST00000301280 KCNJ18B7U540 433 aa17.54■□□□□ 0.4
CHAF1A-201ENST00000301280 GDF11O95390 407 aa17.54■□□□□ 0.4
CHAF1A-201ENST00000301280 LDHCP07864 332 aa17.54■□□□□ 0.4
CHAF1A-201ENST00000301280 PLCG1P19174 1290 aa17.54■□□□□ 0.4
CHAF1A-201ENST00000301280 FAM193AP78312 1265 aa17.54■□□□□ 0.4
CHAF1A-201ENST00000301280 KCNJ12Q14500 433 aa17.54■□□□□ 0.4
CHAF1A-201ENST00000301280 MYH1P12882 1939 aa17.53■□□□□ 0.4
CHAF1A-201ENST00000301280 SARSP49591 514 aaKnown RBP17.53■□□□□ 0.4
CHAF1A-201ENST00000301280 SPATA1Q5VX52 437 aa17.53■□□□□ 0.4
CHAF1A-201ENST00000301280 RRP36Q96EU6 259 aaKnown RBP17.53■□□□□ 0.4
CHAF1A-201ENST00000301280 MTRQ99707 1265 aa17.53■□□□□ 0.4
CHAF1A-201ENST00000301280 MMRN2Q9H8L6 949 aa17.53■□□□□ 0.4
CHAF1A-201ENST00000301280 TDP2O95551 362 aa17.53■□□□□ 0.4
CHAF1A-201ENST00000301280 KRT18P05783 430 aaKnown RBP17.53■□□□□ 0.4
CHAF1A-201ENST00000301280 UBXN2AP68543 259 aa17.53■□□□□ 0.4
CHAF1A-201ENST00000301280 POTEDQ86YR6 584 aa17.53■□□□□ 0.4
CHAF1A-201ENST00000301280 CSGALNACT2Q8N6G5 542 aa17.53■□□□□ 0.4
CHAF1A-201ENST00000301280 ZNF397Q8NF99 534 aaPredicted RBP17.53■□□□□ 0.4
CHAF1A-201ENST00000301280 PKD2L1Q9P0L9 805 aa17.53■□□□□ 0.4
CHAF1A-201ENST00000301280 NAV1Q8NEY1 1877 aa17.53■□□□□ 0.4
CHAF1A-201ENST00000301280 ARHGAP6O43182 974 aa17.52■□□□□ 0.4
CHAF1A-201ENST00000301280 AKR1B1P15121 316 aa17.52■□□□□ 0.4
CHAF1A-201ENST00000301280 RASA1P20936 1047 aa17.52■□□□□ 0.4
CHAF1A-201ENST00000301280 CABP7Q86V35 215 aa17.52■□□□□ 0.4
CHAF1A-201ENST00000301280 ENOX1Q8TC92 643 aaKnown RBP17.52■□□□□ 0.4
CHAF1A-201ENST00000301280 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.52■□□□□ 0.43e-6■■■■■ 70.4
CHAF1A-201ENST00000301280 CCDC175P0C221 793 aa17.52■□□□□ 0.4
CHAF1A-201ENST00000301280 RNASE9P60153 205 aaKnown RBP17.52■□□□□ 0.4
CHAF1A-201ENST00000301280 IRS2Q9Y4H2 1338 aa17.52■□□□□ 0.4
CHAF1A-201ENST00000301280 USP17L15C9J2P7 530 aa17.52■□□□□ 0.39
CHAF1A-201ENST00000301280 USP17L13C9JLJ4 530 aa17.52■□□□□ 0.39
CHAF1A-201ENST00000301280 USP17L11C9JVI0 530 aa17.52■□□□□ 0.39
CHAF1A-201ENST00000301280 USP17L18D6R9N7 530 aa17.52■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms