RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 RANBP1P43487 201 aa16.02■□□□□ 0.16
CDT1-201ENST00000301019 VAV2P52735 878 aa16.02■□□□□ 0.16
CDT1-201ENST00000301019 DNAAF5Q86Y56 855 aa16.02■□□□□ 0.16
CDT1-201ENST00000301019 CCDC26Q8TAB7 109 aa16.02■□□□□ 0.16
CDT1-201ENST00000301019 LRRC59Q96AG4 307 aaKnown RBP16.02■□□□□ 0.16
CDT1-201ENST00000301019 STIM2Q9P246 746 aa16.02■□□□□ 0.16
CDT1-201ENST00000301019 CD2APQ9Y5K6 639 aa16.02■□□□□ 0.16
CDT1-201ENST00000301019 IGSF1Q8N6C5 1336 aa16.02■□□□□ 0.16
CDT1-201ENST00000301019 GOLGA8AA7E2F4 631 aa16.02■□□□□ 0.16
CDT1-201ENST00000301019 RANBP6O60518 1105 aaKnown RBP16.02■□□□□ 0.16
CDT1-201ENST00000301019 ARID4AP29374 1257 aaPredicted RBP16.02■□□□□ 0.16
CDT1-201ENST00000301019 ZNF174Q15697 407 aa16.02■□□□□ 0.16
CDT1-201ENST00000301019 OR8K1Q8NGG5 319 aa16.02■□□□□ 0.16
CDT1-201ENST00000301019 SEC16BQ96JE7 1060 aa16.02■□□□□ 0.16
CDT1-201ENST00000301019 HAUS4Q9H6D7 363 aa16.02■□□□□ 0.16
CDT1-201ENST00000301019 LRRC4CQ9HCJ2 640 aa16.02■□□□□ 0.16
CDT1-201ENST00000301019 RGPD1P0DJD0 1748 aa16.02■□□□□ 0.15
CDT1-201ENST00000301019 ZNF213O14771 459 aa16.02■□□□□ 0.15
CDT1-201ENST00000301019 NKRFO15226 690 aaKnown RBP eCLIP16.02■□□□□ 0.15
CDT1-201ENST00000301019 PPP6R2O75170 966 aa16.02■□□□□ 0.15
CDT1-201ENST00000301019 PRDM1O75626 825 aa16.02■□□□□ 0.15
CDT1-201ENST00000301019 ATP6V1G2O95670 118 aa16.02■□□□□ 0.15
CDT1-201ENST00000301019 KIF5AQ12840 1032 aa16.02■□□□□ 0.15
CDT1-201ENST00000301019 GRIK3Q13003 919 aa16.02■□□□□ 0.15
CDT1-201ENST00000301019 TUBB2AQ13885 445 aa16.02■□□□□ 0.15
CDT1-201ENST00000301019 CREG2Q8IUH2 290 aa16.02■□□□□ 0.15
CDT1-201ENST00000301019 CCDC170Q8IYT3 715 aa16.02■□□□□ 0.15
CDT1-201ENST00000301019 BORCS6Q96GS4 357 aa16.02■□□□□ 0.15
CDT1-201ENST00000301019 SH3GL3Q99963 347 aa16.02■□□□□ 0.15
CDT1-201ENST00000301019 TUBB2BQ9BVA1 445 aa16.02■□□□□ 0.15
CDT1-201ENST00000301019 TRIM31Q9BZY9 425 aa16.02■□□□□ 0.15
CDT1-201ENST00000301019 PANK4Q9NVE7 773 aa16.02■□□□□ 0.15
CDT1-201ENST00000301019 GOLGA6L10A6NI86 522 aa16.01■□□□□ 0.15
CDT1-201ENST00000301019 PSMD14O00487 310 aa16.01■□□□□ 0.15
CDT1-201ENST00000301019 FAM107AO95990 144 aa16.01■□□□□ 0.15
CDT1-201ENST00000301019 IFNAR2P48551 515 aa16.01■□□□□ 0.15
CDT1-201ENST00000301019 GRIPAP1Q4V328 841 aa16.01■□□□□ 0.15
CDT1-201ENST00000301019 CYB5R4Q7L1T6 521 aa16.01■□□□□ 0.15
CDT1-201ENST00000301019 CEP120Q8N960 986 aa16.01■□□□□ 0.15
CDT1-201ENST00000301019 PUS7LQ9H0K6 701 aaKnown RBP16.01■□□□□ 0.15
CDT1-201ENST00000301019 GOLPH3Q9H4A6 298 aa16.01■□□□□ 0.15
CDT1-201ENST00000301019 ZNF330Q9Y3S2 320 aaPredicted RBP16.01■□□□□ 0.15
CDT1-201ENST00000301019 LTN1O94822 1766 aa16.01■□□□□ 0.15
CDT1-201ENST00000301019 TLDC2A0PJX2 215 aa16.01■□□□□ 0.15
CDT1-201ENST00000301019 EPHB4P54760 987 aa16.01■□□□□ 0.15
CDT1-201ENST00000301019 MAP3K12Q12852 859 aa16.01■□□□□ 0.15
CDT1-201ENST00000301019 HAUS3Q68CZ6 603 aa16.01■□□□□ 0.15
CDT1-201ENST00000301019 LMBR1LQ6UX01 489 aa16.01■□□□□ 0.15
CDT1-201ENST00000301019 EHBP1Q8NDI1 1231 aa16.01■□□□□ 0.15
CDT1-201ENST00000301019 SLC17A8Q8NDX2 589 aa16.01■□□□□ 0.15
CDT1-201ENST00000301019 UBLCP1Q8WVY7 318 aaPredicted RBP16.01■□□□□ 0.15
CDT1-201ENST00000301019 SYMPKQ92797 1274 aaKnown RBP16.01■□□□□ 0.15
CDT1-201ENST00000301019 SPAG5Q96R06 1193 aa16.01■□□□□ 0.15
CDT1-201ENST00000301019 PIDD1Q9HB75 910 aa16.01■□□□□ 0.15
CDT1-201ENST00000301019 NOVA2Q9UNW9 492 aaKnown RBP16.01■□□□□ 0.15
CDT1-201ENST00000301019 FTCDO95954 541 aa16■□□□□ 0.15
CDT1-201ENST00000301019 C11orf91Q3C1V1 193 aa16■□□□□ 0.15
CDT1-201ENST00000301019 WDR59Q6PJI9 974 aa16■□□□□ 0.15
CDT1-201ENST00000301019 CACNA2D3Q8IZS8 1091 aa16■□□□□ 0.15
CDT1-201ENST00000301019 CABLES1Q8TDN4 633 aa16■□□□□ 0.15
CDT1-201ENST00000301019 NELFBQ8WX92 580 aa16■□□□□ 0.15
CDT1-201ENST00000301019 HAUS7Q99871 368 aa16■□□□□ 0.15
CDT1-201ENST00000301019 CCDC113Q9H0I3 377 aa16■□□□□ 0.15
CDT1-201ENST00000301019 NHEJ1Q9H9Q4 299 aaPredicted RBP16■□□□□ 0.15
CDT1-201ENST00000301019 TRPC6Q9Y210 931 aa16■□□□□ 0.15
CDT1-201ENST00000301019 MED1Q15648 1581 aaPredicted RBP16■□□□□ 0.15
CDT1-201ENST00000301019 SOS2Q07890 1332 aaPredicted RBP16■□□□□ 0.15
CDT1-201ENST00000301019 WNT7AO00755 349 aa16■□□□□ 0.15
CDT1-201ENST00000301019 ACTN4O43707 911 aaKnown RBP16■□□□□ 0.15
CDT1-201ENST00000301019 PBX1P40424 430 aa16■□□□□ 0.15
CDT1-201ENST00000301019 ZC3H6P61129 1189 aaKnown RBP16■□□□□ 0.15
CDT1-201ENST00000301019 PTPN12Q05209 780 aaKnown RBP16■□□□□ 0.15
CDT1-201ENST00000301019 FAM47EQ6ZV65 393 aa16■□□□□ 0.15
CDT1-201ENST00000301019 COPS6Q7L5N1 327 aa16■□□□□ 0.15
CDT1-201ENST00000301019 ZNF513Q8N8E2 541 aaPredicted RBP16■□□□□ 0.15
CDT1-201ENST00000301019 PAGE5Q96GU1 130 aa16■□□□□ 0.15
CDT1-201ENST00000301019 ARHGEF10LQ9HCE6 1279 aa16■□□□□ 0.15
CDT1-201ENST00000301019 KLHL33A6NCF5 533 aa16■□□□□ 0.15
CDT1-201ENST00000301019 ELF3P78545 371 aaPredicted RBP16■□□□□ 0.15
CDT1-201ENST00000301019 ARID5AQ03989 594 aa16■□□□□ 0.15
CDT1-201ENST00000301019 CUL4BQ13620 913 aa16■□□□□ 0.15
CDT1-201ENST00000301019 RBBP5Q15291 538 aaKnown RBP16■□□□□ 0.15
CDT1-201ENST00000301019 NBPF20Q3BBV1 942 aa16■□□□□ 0.15
CDT1-201ENST00000301019 TLDC1Q6P9B6 456 aa16■□□□□ 0.15
CDT1-201ENST00000301019 NOSTRINQ8IVI9 506 aa16■□□□□ 0.15
CDT1-201ENST00000301019 NCOA7Q8NI08 942 aa16■□□□□ 0.15
CDT1-201ENST00000301019 AGAP11Q8TF27 550 aa16■□□□□ 0.15
CDT1-201ENST00000301019 RBM28Q9NW13 759 aaKnown RBP16■□□□□ 0.15
CDT1-201ENST00000301019 FBXO2Q9UK22 296 aaPredicted RBP16■□□□□ 0.15
CDT1-201ENST00000301019 GMNCA6NCL1 334 aa15.99■□□□□ 0.15
CDT1-201ENST00000301019 MAP3K13O43283 966 aa15.99■□□□□ 0.15
CDT1-201ENST00000301019 ADCY2Q08462 1091 aa15.99■□□□□ 0.15
CDT1-201ENST00000301019 ZNF530Q6P9A1 599 aaPredicted RBP15.99■□□□□ 0.15
CDT1-201ENST00000301019 XAGE3Q8WTP9 111 aa15.99■□□□□ 0.15
CDT1-201ENST00000301019 TARSL2A2RTX5 802 aaKnown RBP15.99■□□□□ 0.15
CDT1-201ENST00000301019 PPP1R3GB7ZBB8 358 aa15.99■□□□□ 0.15
CDT1-201ENST00000301019 TUBB4BP68371 445 aa15.99■□□□□ 0.15
CDT1-201ENST00000301019 SAFBQ15424 915 aaKnown RBP eCLIP15.99■□□□□ 0.15
CDT1-201ENST00000301019 LRRC24Q50LG9 513 aa15.99■□□□□ 0.15
CDT1-201ENST00000301019 TAX1BP1Q86VP1 789 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms