RNA–Protein interactions for RNA: ENST00000299840.10

VWA3A-201, Transcript of von Willebrand factor A domain containing 3A, humanhuman

TSL 1 (best)

Gene VWA3A, Length 2,513 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VWA3A-201ENST00000299840 CRHR2Q13324 411 aa12.39□□□□□ -0.43
VWA3A-201ENST00000299840 SEPT2Q15019 361 aa12.39□□□□□ -0.43
VWA3A-201ENST00000299840 TAF1CQ15572 869 aaPredicted RBP12.39□□□□□ -0.43
VWA3A-201ENST00000299840 MICALL1Q8N3F8 863 aa12.39□□□□□ -0.43
VWA3A-201ENST00000299840 FAXDC2Q96IV6 333 aa12.39□□□□□ -0.43
VWA3A-201ENST00000299840 MKNK2Q9HBH9 465 aa12.39□□□□□ -0.43
VWA3A-201ENST00000299840 RRP15Q9Y3B9 282 aaKnown RBP12.39□□□□□ -0.43
VWA3A-201ENST00000299840 GPR25O00155 361 aa12.39□□□□□ -0.43
VWA3A-201ENST00000299840 ORC4O43929 436 aa12.39□□□□□ -0.43
VWA3A-201ENST00000299840 RAD21O60216 631 aa12.39□□□□□ -0.43
VWA3A-201ENST00000299840 PCP11498 1178 aaKnown RBP12.39□□□□□ -0.43
VWA3A-201ENST00000299840 NT5C2P49902 561 aa12.39□□□□□ -0.43
VWA3A-201ENST00000299840 USP14P54578 494 aa12.39□□□□□ -0.43
VWA3A-201ENST00000299840 TRAF1Q13077 416 aa12.39□□□□□ -0.43
VWA3A-201ENST00000299840 RABEP1Q15276 862 aa12.39□□□□□ -0.43
VWA3A-201ENST00000299840 ZNF280DQ6N043 979 aa12.39□□□□□ -0.43
VWA3A-201ENST00000299840 GADL1Q6ZQY3 521 aa12.39□□□□□ -0.43
VWA3A-201ENST00000299840 R3HDMLQ9H3Y0 253 aa12.39□□□□□ -0.43
VWA3A-201ENST00000299840 TSKSQ9UJT2 592 aa12.39□□□□□ -0.43
VWA3A-201ENST00000299840 IGKV6D-41A0A0C4DH26 115 aa12.38□□□□□ -0.43
VWA3A-201ENST00000299840 SGSM2O43147 1006 aa12.38□□□□□ -0.43
VWA3A-201ENST00000299840 ERCC3P19447 782 aa12.38□□□□□ -0.43
VWA3A-201ENST00000299840 HOXA7P31268 230 aaPredicted RBP12.38□□□□□ -0.43
VWA3A-201ENST00000299840 PABPC4Q13310 644 aaKnown RBP eCLIP12.38□□□□□ -0.43
VWA3A-201ENST00000299840 MTMR2Q13614 643 aa12.38□□□□□ -0.43
VWA3A-201ENST00000299840 RAB3GAP1Q15042 981 aa12.38□□□□□ -0.43
VWA3A-201ENST00000299840 SIAH1Q8IUQ4 282 aa12.38□□□□□ -0.43
VWA3A-201ENST00000299840 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.38□□□□□ -0.43
VWA3A-201ENST00000299840 IL25Q9H293 177 aa12.38□□□□□ -0.43
VWA3A-201ENST00000299840 KANSL2Q9H9L4 492 aa12.38□□□□□ -0.43
VWA3A-201ENST00000299840 TMOD4Q9NZQ9 345 aa12.38□□□□□ -0.43
VWA3A-201ENST00000299840 RLFQ13129 1914 aa12.38□□□□□ -0.43
VWA3A-201ENST00000299840 TLR2O60603 784 aa12.38□□□□□ -0.43
VWA3A-201ENST00000299840 BRD1O95696 1058 aa12.38□□□□□ -0.43
VWA3A-201ENST00000299840 MAGEA8P43361 318 aa12.38□□□□□ -0.43
VWA3A-201ENST00000299840 HMGCS2P54868 508 aa12.38□□□□□ -0.43
VWA3A-201ENST00000299840 WWC2Q6AWC2 1192 aa12.38□□□□□ -0.43
VWA3A-201ENST00000299840 ZNF444Q8N0Y2 327 aaPredicted RBP12.38□□□□□ -0.43
VWA3A-201ENST00000299840 NEDD1Q8NHV4 660 aa12.38□□□□□ -0.43
VWA3A-201ENST00000299840 PARK7Q99497 189 aaKnown RBP12.38□□□□□ -0.43
VWA3A-201ENST00000299840 RBSNQ9H1K0 784 aa12.38□□□□□ -0.43
VWA3A-201ENST00000299840 RMI1Q9H9A7 625 aa12.38□□□□□ -0.43
VWA3A-201ENST00000299840 GOPCQ9HD26 462 aa12.38□□□□□ -0.43
VWA3A-201ENST00000299840 EMILIN3Q9NT22 766 aa12.38□□□□□ -0.43
VWA3A-201ENST00000299840 SPTLC3Q9NUV7 552 aa12.38□□□□□ -0.43
VWA3A-201ENST00000299840 PES1O00541 588 aaKnown RBP12.37□□□□□ -0.43
VWA3A-201ENST00000299840 NEBLO76041 1014 aa12.37□□□□□ -0.43
VWA3A-201ENST00000299840 PSMD2Q13200 908 aa12.37□□□□□ -0.43
VWA3A-201ENST00000299840 BMS1Q14692 1282 aaKnown RBP12.37□□□□□ -0.43
VWA3A-201ENST00000299840 FOXD4L5Q5VV16 416 aaPredicted RBP12.37□□□□□ -0.43
VWA3A-201ENST00000299840 MMS22LQ6ZRQ5 1243 aa12.37□□□□□ -0.43
VWA3A-201ENST00000299840 ACER1Q8TDN7 264 aa12.37□□□□□ -0.43
VWA3A-201ENST00000299840 FOXD4L4Q8WXT5 416 aaPredicted RBP12.37□□□□□ -0.43
VWA3A-201ENST00000299840 SYNPO2Q9UMS6 1093 aa12.37□□□□□ -0.43
VWA3A-201ENST00000299840 TMX2Q9Y320 296 aa12.37□□□□□ -0.43
VWA3A-201ENST00000299840 TACC3Q9Y6A5 838 aa12.37□□□□□ -0.43
VWA3A-201ENST00000299840 FKTNO75072 461 aa12.37□□□□□ -0.43
VWA3A-201ENST00000299840 EIF3JO75822 258 aaKnown RBP12.37□□□□□ -0.43
VWA3A-201ENST00000299840 TPM1P09493 284 aa12.37□□□□□ -0.43
VWA3A-201ENST00000299840 CTDSPL2Q05D32 466 aa12.37□□□□□ -0.43
VWA3A-201ENST00000299840 TREML2Q5T2D2 321 aa12.37□□□□□ -0.43
VWA3A-201ENST00000299840 C17orf99Q6UX52 265 aa12.37□□□□□ -0.43
VWA3A-201ENST00000299840 THOC1Q96FV9 657 aaKnown RBP12.37□□□□□ -0.43
VWA3A-201ENST00000299840 ZNF396Q96N95 335 aaPredicted RBP12.37□□□□□ -0.43
VWA3A-201ENST00000299840 SH2D4AQ9H788 454 aa12.37□□□□□ -0.43
VWA3A-201ENST00000299840 ARHGEF10LQ9HCE6 1279 aa12.37□□□□□ -0.43
VWA3A-201ENST00000299840 NYAP2Q9P242 653 aa12.37□□□□□ -0.43
VWA3A-201ENST00000299840 PNMA3Q9UL41 463 aa12.37□□□□□ -0.43
VWA3A-201ENST00000299840 PCNTO95613 3336 aa12.37□□□□□ -0.43
VWA3A-201ENST00000299840 A0A1W2PRG0 241 aa12.36□□□□□ -0.43
VWA3A-201ENST00000299840 ICA1Q05084 483 aa12.36□□□□□ -0.43
VWA3A-201ENST00000299840 TEX35Q5T0J7 233 aa12.36□□□□□ -0.43
VWA3A-201ENST00000299840 ZNF296Q8WUU4 475 aaPredicted RBP12.36□□□□□ -0.43
VWA3A-201ENST00000299840 STAG1Q8WVM7 1258 aa12.36□□□□□ -0.43
VWA3A-201ENST00000299840 OSBPP22059 807 aa12.36□□□□□ -0.43
VWA3A-201ENST00000299840 KLHL40Q2TBA0 621 aa12.36□□□□□ -0.43
VWA3A-201ENST00000299840 GPT2Q8TD30 523 aa12.36□□□□□ -0.43
VWA3A-201ENST00000299840 TACO1Q9BSH4 297 aaKnown RBP12.36□□□□□ -0.43
VWA3A-201ENST00000299840 MTMR7Q9Y216 660 aa12.36□□□□□ -0.43
VWA3A-201ENST00000299840 SMC2O95347 1197 aa12.35□□□□□ -0.43
VWA3A-201ENST00000299840 NAT1P18440 290 aa12.35□□□□□ -0.43
VWA3A-201ENST00000299840 NOVP48745 357 aa12.35□□□□□ -0.43
VWA3A-201ENST00000299840 AKNAD1Q5T1N1 836 aa12.35□□□□□ -0.43
VWA3A-201ENST00000299840 NEK11Q8NG66 645 aa12.35□□□□□ -0.43
VWA3A-201ENST00000299840 KCNV2Q8TDN2 545 aa12.35□□□□□ -0.43
VWA3A-201ENST00000299840 MIEF2Q96C03 454 aa12.35□□□□□ -0.43
VWA3A-201ENST00000299840 ESYT1Q9BSJ8 1104 aa12.35□□□□□ -0.43
VWA3A-201ENST00000299840 RNF41Q9H4P4 317 aaPredicted RBP12.35□□□□□ -0.43
VWA3A-201ENST00000299840 ZNF213O14771 459 aa12.35□□□□□ -0.43
VWA3A-201ENST00000299840 PRDM1O75626 825 aa12.35□□□□□ -0.43
VWA3A-201ENST00000299840 BCRP11274 1271 aa12.35□□□□□ -0.43
VWA3A-201ENST00000299840 EEF2P13639 858 aaKnown RBP12.35□□□□□ -0.43
VWA3A-201ENST00000299840 FMNL3Q8IVF7 1028 aa12.35□□□□□ -0.43
VWA3A-201ENST00000299840 STK11IPQ8N1F8 1099 aa12.35□□□□□ -0.43
VWA3A-201ENST00000299840 CCDC26Q8TAB7 109 aa12.35□□□□□ -0.43
VWA3A-201ENST00000299840 LPAR1Q92633 364 aa12.35□□□□□ -0.43
VWA3A-201ENST00000299840 SLC24A3Q9HC58 644 aa12.35□□□□□ -0.43
VWA3A-201ENST00000299840 TCP11L1Q9NUJ3 509 aa12.35□□□□□ -0.43
VWA3A-201ENST00000299840 CHCHD3Q9NX63 227 aaKnown RBP12.35□□□□□ -0.43
VWA3A-201ENST00000299840 A0A0G2JMZ2 1700 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms