RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 LRP10Q7Z4F1 713 aa12.71□□□□□ -0.38
TRUB1-201ENST00000298746 SUGP1Q8IWZ8 645 aaKnown RBP12.71□□□□□ -0.38
TRUB1-201ENST00000298746 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.71□□□□□ -0.38
TRUB1-201ENST00000298746 RNF26Q9BY78 433 aaPredicted RBP12.71□□□□□ -0.38
TRUB1-201ENST00000298746 ACTN3Q08043 901 aaPredicted RBP12.7□□□□□ -0.38
TRUB1-201ENST00000298746 PDE4DQ08499 809 aa12.7□□□□□ -0.38
TRUB1-201ENST00000298746 TTLL11Q8NHH1 800 aa12.7□□□□□ -0.38
TRUB1-201ENST00000298746 SPATA20Q8TB22 786 aa12.7□□□□□ -0.38
TRUB1-201ENST00000298746 RASGRP4Q8TDF6 673 aa12.7□□□□□ -0.38
TRUB1-201ENST00000298746 PYM1Q9BRP8 204 aaKnown RBP12.7□□□□□ -0.38
TRUB1-201ENST00000298746 EPB41L5Q9HCM4 733 aa12.7□□□□□ -0.38
TRUB1-201ENST00000298746 STIM2Q9P246 746 aa12.7□□□□□ -0.38
TRUB1-201ENST00000298746 RCCD1A6NED2 376 aa12.7□□□□□ -0.38
TRUB1-201ENST00000298746 AGPSO00116 658 aa12.7□□□□□ -0.38
TRUB1-201ENST00000298746 WNT7AO00755 349 aa12.7□□□□□ -0.38
TRUB1-201ENST00000298746 SEC24CP53992 1094 aa12.7□□□□□ -0.38
TRUB1-201ENST00000298746 PTPROQ16827 1216 aa12.7□□□□□ -0.38
TRUB1-201ENST00000298746 CEP85LQ5SZL2 805 aa12.7□□□□□ -0.38
TRUB1-201ENST00000298746 PAPD7Q5XG87 772 aaKnown RBP12.7□□□□□ -0.38
TRUB1-201ENST00000298746 DTHD1Q6ZMT9 781 aa12.7□□□□□ -0.38
TRUB1-201ENST00000298746 TSGA10Q9BZW7 698 aa12.7□□□□□ -0.38
TRUB1-201ENST00000298746 CYP2D7A0A087X1C5 515 aa12.69□□□□□ -0.38
TRUB1-201ENST00000298746 PP2D1A8MPX8 630 aa12.69□□□□□ -0.38
TRUB1-201ENST00000298746 PDE8BO95263 885 aa12.69□□□□□ -0.38
TRUB1-201ENST00000298746 PLEKP08567 350 aaPredicted RBP12.69□□□□□ -0.38
TRUB1-201ENST00000298746 RRAGAQ7L523 313 aa12.69□□□□□ -0.38
TRUB1-201ENST00000298746 KLHL7Q8IXQ5 586 aa12.69□□□□□ -0.38
TRUB1-201ENST00000298746 IFT20Q8IY31 132 aa12.69□□□□□ -0.38
TRUB1-201ENST00000298746 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.69□□□□□ -0.38
TRUB1-201ENST00000298746 HYOU1Q9Y4L1 999 aa12.69□□□□□ -0.38
TRUB1-201ENST00000298746 GSG1L2A8MUP6 293 aa12.69□□□□□ -0.38
TRUB1-201ENST00000298746 APBA1Q02410 837 aa12.69□□□□□ -0.38
TRUB1-201ENST00000298746 PROSER2Q86WR7 435 aaPredicted RBP12.69□□□□□ -0.38
TRUB1-201ENST00000298746 FAM212AQ96EL1 285 aa12.69□□□□□ -0.38
TRUB1-201ENST00000298746 CD248Q9HCU0 757 aa12.69□□□□□ -0.38
TRUB1-201ENST00000298746 CAPN11Q9UMQ6 739 aa12.69□□□□□ -0.38
TRUB1-201ENST00000298746 RTL9Q8NET4 1388 aa12.69□□□□□ -0.38
TRUB1-201ENST00000298746 N4BP2Q86UW6 1770 aaPredicted RBP12.69□□□□□ -0.38
TRUB1-201ENST00000298746 FRMD3A2A2Y4 597 aa12.69□□□□□ -0.38
TRUB1-201ENST00000298746 SF3B2Q13435 895 aaKnown RBP12.69□□□□□ -0.38
TRUB1-201ENST00000298746 CNOT6LQ96LI5 555 aaKnown RBP12.69□□□□□ -0.38
TRUB1-201ENST00000298746 NUP58Q9BVL2 599 aa12.69□□□□□ -0.38
TRUB1-201ENST00000298746 SOS2Q07890 1332 aaPredicted RBP12.68□□□□□ -0.38
TRUB1-201ENST00000298746 MEFVO15553 781 aaPredicted RBP12.68□□□□□ -0.38
TRUB1-201ENST00000298746 HEXIM1O94992 359 aaKnown RBP12.68□□□□□ -0.38
TRUB1-201ENST00000298746 TCP1P17987 556 aaKnown RBP12.68□□□□□ -0.38
TRUB1-201ENST00000298746 EEF1GP26641 437 aaKnown RBP12.68□□□□□ -0.38
TRUB1-201ENST00000298746 PMS1P54277 932 aaKnown RBP12.68□□□□□ -0.38
TRUB1-201ENST00000298746 ZBED6P86452 979 aa12.68□□□□□ -0.38
TRUB1-201ENST00000298746 RASSF7Q02833 373 aa12.68□□□□□ -0.38
TRUB1-201ENST00000298746 E2F5Q15329 346 aa12.68□□□□□ -0.38
TRUB1-201ENST00000298746 FAM114A1Q8IWE2 563 aa12.68□□□□□ -0.38
TRUB1-201ENST00000298746 FNBP4Q8N3X1 1017 aaPredicted RBP12.68□□□□□ -0.38
TRUB1-201ENST00000298746 SNX12Q9UMY4 172 aa12.68□□□□□ -0.38
TRUB1-201ENST00000298746 CAPN6Q9Y6Q1 641 aa12.68□□□□□ -0.38
TRUB1-201ENST00000298746 ANO9A1A5B4 782 aa12.68□□□□□ -0.38
TRUB1-201ENST00000298746 ECM2O94769 699 aaPredicted RBP12.68□□□□□ -0.38
TRUB1-201ENST00000298746 NR1D1P20393 614 aa12.68□□□□□ -0.38
TRUB1-201ENST00000298746 TSEN2Q8NCE0 465 aaKnown RBP12.68□□□□□ -0.38
TRUB1-201ENST00000298746 TAF4BQ92750 862 aa12.68□□□□□ -0.38
TRUB1-201ENST00000298746 MS4A14Q96JA4 679 aa12.68□□□□□ -0.38
TRUB1-201ENST00000298746 ZIM3Q96PE6 472 aa12.68□□□□□ -0.38
TRUB1-201ENST00000298746 OSBPL9Q96SU4 736 aa12.68□□□□□ -0.38
TRUB1-201ENST00000298746 NLRC4Q9NPP4 1024 aa12.68□□□□□ -0.38
TRUB1-201ENST00000298746 BACH1O14867 736 aa12.68□□□□□ -0.38
TRUB1-201ENST00000298746 EIF4A3P38919 411 aaKnown RBP12.68□□□□□ -0.38
TRUB1-201ENST00000298746 RASGRF1Q13972 1273 aa12.68□□□□□ -0.38
TRUB1-201ENST00000298746 PUM3Q15397 648 aaKnown RBP12.68□□□□□ -0.38
TRUB1-201ENST00000298746 CFAP221Q4G0U5 840 aa12.68□□□□□ -0.38
TRUB1-201ENST00000298746 PCDHA13Q9Y5I0 950 aa12.68□□□□□ -0.38
TRUB1-201ENST00000298746 KDM6AO15550 1401 aaPredicted RBP12.67□□□□□ -0.38
TRUB1-201ENST00000298746 BCAMP50895 628 aa12.67□□□□□ -0.38
TRUB1-201ENST00000298746 PAK2Q13177 524 aa12.67□□□□□ -0.38
TRUB1-201ENST00000298746 EMBQ6PCB8 327 aa12.67□□□□□ -0.38
TRUB1-201ENST00000298746 WDR59Q6PJI9 974 aa12.67□□□□□ -0.38
TRUB1-201ENST00000298746 CCDC170Q8IYT3 715 aa12.67□□□□□ -0.38
TRUB1-201ENST00000298746 ZBTB38Q8NAP3 1195 aaPredicted RBP12.67□□□□□ -0.38
TRUB1-201ENST00000298746 ZCRB1Q8TBF4 217 aaKnown RBP12.67□□□□□ -0.38
TRUB1-201ENST00000298746 KRT12Q99456 494 aa12.67□□□□□ -0.38
TRUB1-201ENST00000298746 TCP11L1Q9NUJ3 509 aa12.67□□□□□ -0.38
TRUB1-201ENST00000298746 PCCAP05165 728 aaPredicted RBP12.67□□□□□ -0.38
TRUB1-201ENST00000298746 GNAT2P19087 354 aa12.67□□□□□ -0.38
TRUB1-201ENST00000298746 ALS2CLQ60I27 953 aa12.67□□□□□ -0.38
TRUB1-201ENST00000298746 SH3RF1Q7Z6J0 888 aa12.67□□□□□ -0.38
TRUB1-201ENST00000298746 LPIN2Q92539 896 aa12.67□□□□□ -0.38
TRUB1-201ENST00000298746 GPKOWQ92917 476 aaPredicted RBP eCLIP12.67□□□□□ -0.38
TRUB1-201ENST00000298746 RNPC3Q96LT9 517 aaKnown RBP12.67□□□□□ -0.38
TRUB1-201ENST00000298746 FBXO3Q9UK99 471 aa12.67□□□□□ -0.38
TRUB1-201ENST00000298746 RIPOR2Q9Y4F9 1068 aa12.67□□□□□ -0.38
TRUB1-201ENST00000298746 KDM3BQ7LBC6 1761 aa12.67□□□□□ -0.38
TRUB1-201ENST00000298746 LRRC10BA6NIK2 292 aa12.66□□□□□ -0.38
TRUB1-201ENST00000298746 A6NNZ2 444 aa12.66□□□□□ -0.38
TRUB1-201ENST00000298746 CPP00450 1065 aa12.66□□□□□ -0.38
TRUB1-201ENST00000298746 CARSP49589 748 aaKnown RBP12.66□□□□□ -0.38
TRUB1-201ENST00000298746 KIF11P52732 1056 aa12.66□□□□□ -0.38
TRUB1-201ENST00000298746 TUBB8Q3ZCM7 444 aa12.66□□□□□ -0.38
TRUB1-201ENST00000298746 FAM47AQ5JRC9 791 aa12.66□□□□□ -0.38
TRUB1-201ENST00000298746 NOX5Q96PH1 765 aa12.66□□□□□ -0.38
TRUB1-201ENST00000298746 ZSCAN10Q96SZ4 725 aaPredicted RBP12.66□□□□□ -0.38
TRUB1-201ENST00000298746 DNAJC7Q99615 494 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms