RNA–Protein interactions for RNA: ENST00000297071.8

TRA2A-201, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRA2A, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-201ENST00000297071 COBLL1Q53SF7 1204 aa21.48■■□□□ 1.03
TRA2A-201ENST00000297071 GBP6Q6ZN66 633 aa21.48■■□□□ 1.03
TRA2A-201ENST00000297071 FAM114A1Q8IWE2 563 aa21.48■■□□□ 1.03
TRA2A-201ENST00000297071 JAKMIP2Q96AA8 810 aa21.48■■□□□ 1.03
TRA2A-201ENST00000297071 MMS19Q96T76 1030 aa21.48■■□□□ 1.03
TRA2A-201ENST00000297071 BLZF1Q9H2G9 400 aa21.48■■□□□ 1.03
TRA2A-201ENST00000297071 ZNHIT6Q9NWK9 470 aaKnown RBP21.48■■□□□ 1.03
TRA2A-201ENST00000297071 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.48■■□□□ 1.03
TRA2A-201ENST00000297071 CCDC88AQ3V6T2 1871 aa21.48■■□□□ 1.03
TRA2A-201ENST00000297071 LAD1O00515 517 aa21.48■■□□□ 1.03
TRA2A-201ENST00000297071 PSMA7O14818 248 aa21.48■■□□□ 1.03
TRA2A-201ENST00000297071 ATP1A1P05023 1023 aaKnown RBP21.48■■□□□ 1.03
TRA2A-201ENST00000297071 GIMAP8Q8ND71 665 aaPredicted RBP21.48■■□□□ 1.03
TRA2A-201ENST00000297071 HELBQ8NG08 1087 aaPredicted RBP21.48■■□□□ 1.03
TRA2A-201ENST00000297071 DISC1Q9NRI5 854 aa21.48■■□□□ 1.03
TRA2A-201ENST00000297071 MAGEC2Q9UBF1 373 aaPredicted RBP21.48■■□□□ 1.03
TRA2A-201ENST00000297071 IPO7O95373 1038 aaKnown RBP21.47■■□□□ 1.03
TRA2A-201ENST00000297071 EIF5P55010 431 aaKnown RBP21.47■■□□□ 1.03
TRA2A-201ENST00000297071 DNAJC21Q5F1R6 531 aaKnown RBP21.47■■□□□ 1.03
TRA2A-201ENST00000297071 CASZ1Q86V15 1759 aa21.46■■□□□ 1.03
TRA2A-201ENST00000297071 MINDY4BA8MYZ0 360 aa21.46■■□□□ 1.03
TRA2A-201ENST00000297071 PRDM1O75626 825 aa21.46■■□□□ 1.03
TRA2A-201ENST00000297071 TFRCP02786 760 aaKnown RBP21.46■■□□□ 1.03
TRA2A-201ENST00000297071 HNRNPH3P31942 346 aaKnown RBP21.46■■□□□ 1.03
TRA2A-201ENST00000297071 STAT6P42226 847 aa21.46■■□□□ 1.03
TRA2A-201ENST00000297071 KIAA1328Q86T90 577 aa21.46■■□□□ 1.03
TRA2A-201ENST00000297071 CRACR2AQ9BSW2 395 aa21.46■■□□□ 1.03
TRA2A-201ENST00000297071 EXOC1Q9NV70 894 aa21.46■■□□□ 1.03
TRA2A-201ENST00000297071 FAM184BQ9ULE4 1060 aa21.46■■□□□ 1.03
TRA2A-201ENST00000297071 BICDL2A1A5D9 508 aa21.45■■□□□ 1.03
TRA2A-201ENST00000297071 KLRC4O43908 158 aa21.45■■□□□ 1.03
TRA2A-201ENST00000297071 TNFRSF8P28908 595 aa21.45■■□□□ 1.03
TRA2A-201ENST00000297071 PRPHP41219 470 aa21.45■■□□□ 1.03
TRA2A-201ENST00000297071 NLRP5P59047 1200 aa21.45■■□□□ 1.03
TRA2A-201ENST00000297071 TTC31Q49AM3 519 aaPredicted RBP21.45■■□□□ 1.03
TRA2A-201ENST00000297071 CCDC152Q4G0S7 254 aa21.45■■□□□ 1.03
TRA2A-201ENST00000297071 GALNT17Q6IS24 598 aa21.45■■□□□ 1.03
TRA2A-201ENST00000297071 TTI2Q6NXR4 508 aa21.45■■□□□ 1.03
TRA2A-201ENST00000297071 SRBD1Q8N5C6 995 aaKnown RBP21.45■■□□□ 1.03
TRA2A-201ENST00000297071 AENQ8WTP8 325 aaKnown RBP21.45■■□□□ 1.03
TRA2A-201ENST00000297071 SMARCC1Q92922 1105 aaPredicted RBP21.45■■□□□ 1.03
TRA2A-201ENST00000297071 ERGIC2Q96RQ1 377 aa21.45■■□□□ 1.03
TRA2A-201ENST00000297071 KBTBD4Q9NVX7 518 aa21.45■■□□□ 1.03
TRA2A-201ENST00000297071 GDAQ9Y2T3 454 aa21.45■■□□□ 1.03
TRA2A-201ENST00000297071 IGHMBP2P38935 993 aaKnown RBP21.45■■□□□ 1.02
TRA2A-201ENST00000297071 VAV2P52735 878 aa21.45■■□□□ 1.02
TRA2A-201ENST00000297071 PARP10Q53GL7 1025 aa21.45■■□□□ 1.02
TRA2A-201ENST00000297071 DZIP3Q86Y13 1208 aaKnown RBP21.45■■□□□ 1.02
TRA2A-201ENST00000297071 DAGLBQ8NCG7 672 aa21.45■■□□□ 1.02
TRA2A-201ENST00000297071 STAMQ92783 540 aa21.45■■□□□ 1.02
TRA2A-201ENST00000297071 GNL3LQ9NVN8 582 aaKnown RBP21.45■■□□□ 1.02
TRA2A-201ENST00000297071 WNK3Q9BYP7 1800 aa21.44■■□□□ 1.02
TRA2A-201ENST00000297071 A0A087WUV0 522 aaPredicted RBP21.44■■□□□ 1.02
TRA2A-201ENST00000297071 BCAMP50895 628 aa21.44■■□□□ 1.02
TRA2A-201ENST00000297071 ZSCAN29Q8IWY8 852 aaPredicted RBP21.44■■□□□ 1.02
TRA2A-201ENST00000297071 MIGA1Q8NAN2 632 aa21.44■■□□□ 1.02
TRA2A-201ENST00000297071 TRIM58Q8NG06 486 aa21.44■■□□□ 1.02
TRA2A-201ENST00000297071 CCDC47Q96A33 483 aaKnown RBP21.44■■□□□ 1.02
TRA2A-201ENST00000297071 TRIM10Q9UDY6 481 aa21.44■■□□□ 1.02
TRA2A-201ENST00000297071 JRKLQ9Y4A0 524 aa21.44■■□□□ 1.02
TRA2A-201ENST00000297071 GOLGA8KD6RF30 607 aa21.43■■□□□ 1.02
TRA2A-201ENST00000297071 LCA5LO95447 670 aa21.43■■□□□ 1.02
TRA2A-201ENST00000297071 EPB41P11171 864 aaKnown RBP21.43■■□□□ 1.02
TRA2A-201ENST00000297071 PPFIA1Q13136 1202 aa21.43■■□□□ 1.02
TRA2A-201ENST00000297071 PIK3AP1Q6ZUJ8 805 aa21.43■■□□□ 1.02
TRA2A-201ENST00000297071 CCDC155Q8N6L0 562 aa21.43■■□□□ 1.02
TRA2A-201ENST00000297071 FAM76AQ8TAV0 307 aa21.43■■□□□ 1.02
TRA2A-201ENST00000297071 SH3GL2Q99962 352 aa21.43■■□□□ 1.02
TRA2A-201ENST00000297071 SELENOOQ9BVL4 669 aa21.43■■□□□ 1.02
TRA2A-201ENST00000297071 ZBTB1Q9Y2K1 713 aa21.43■■□□□ 1.02
TRA2A-201ENST00000297071 ABCB11O95342 1321 aa21.43■■□□□ 1.02
TRA2A-201ENST00000297071 AGPSO00116 658 aa21.43■■□□□ 1.02
TRA2A-201ENST00000297071 CCNE1P24864 410 aa21.43■■□□□ 1.02
TRA2A-201ENST00000297071 KIF5BP33176 963 aa21.43■■□□□ 1.02
TRA2A-201ENST00000297071 NAALADL2Q58DX5 795 aa21.43■■□□□ 1.02
TRA2A-201ENST00000297071 FOXR1Q6PIV2 292 aa21.43■■□□□ 1.02
TRA2A-201ENST00000297071 ARHGAP27Q6ZUM4 889 aa21.43■■□□□ 1.02
TRA2A-201ENST00000297071 BLIDQ8IZY5 108 aa21.43■■□□□ 1.02
TRA2A-201ENST00000297071 SDR42E1Q8WUS8 393 aa21.43■■□□□ 1.02
TRA2A-201ENST00000297071 YY1AP1Q9H869 796 aa21.43■■□□□ 1.02
TRA2A-201ENST00000297071 ATXN2Q99700 1313 aaKnown RBP21.43■■□□□ 1.02
TRA2A-201ENST00000297071 VGLL3A8MV65 326 aa21.42■■□□□ 1.02
TRA2A-201ENST00000297071 TRIM47Q96LD4 638 aa21.42■■□□□ 1.02
TRA2A-201ENST00000297071 AK8Q96MA6 479 aa21.42■■□□□ 1.02
TRA2A-201ENST00000297071 NHEJ1Q9H9Q4 299 aaPredicted RBP21.42■■□□□ 1.02
TRA2A-201ENST00000297071 HDAC6Q9UBN7 1215 aa21.42■■□□□ 1.02
TRA2A-201ENST00000297071 SNX12Q9UMY4 172 aa21.42■■□□□ 1.02
TRA2A-201ENST00000297071 PCDHA4Q9UN74 947 aa21.42■■□□□ 1.02
TRA2A-201ENST00000297071 MYH10P35580 1976 aa21.41■■□□□ 1.02
TRA2A-201ENST00000297071 M0R2N6 131 aa21.41■■□□□ 1.02
TRA2A-201ENST00000297071 OPA1O60313 960 aa21.41■■□□□ 1.02
TRA2A-201ENST00000297071 USO1O60763 962 aaKnown RBP21.41■■□□□ 1.02
TRA2A-201ENST00000297071 MCM7P33993 719 aa21.41■■□□□ 1.02
TRA2A-201ENST00000297071 KIF5AQ12840 1032 aa21.41■■□□□ 1.02
TRA2A-201ENST00000297071 NNTQ13423 1086 aa21.41■■□□□ 1.02
TRA2A-201ENST00000297071 SBK1Q52WX2 424 aa21.41■■□□□ 1.02
TRA2A-201ENST00000297071 ALS2CLQ60I27 953 aa21.41■■□□□ 1.02
TRA2A-201ENST00000297071 DTHD1Q6ZMT9 781 aa21.41■■□□□ 1.02
TRA2A-201ENST00000297071 ADGRA1Q86SQ6 560 aa21.41■■□□□ 1.02
TRA2A-201ENST00000297071 ANKS1AQ92625 1134 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms