RNA–Protein interactions for RNA: ENST00000296043.6

SHROOM3-201, Transcript of shroom family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM3, Length 11,020 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-201ENST00000296043 ICA1LQ8NDH6 482 aa12.82□□□□□ -0.36
SHROOM3-201ENST00000296043 ZFP69BQ9UJL9 534 aa12.82□□□□□ -0.36
SHROOM3-201ENST00000296043 MORC2Q9Y6X9 1032 aaPredicted RBP12.82□□□□□ -0.36
SHROOM3-201ENST00000296043 TPD52L2O43399 206 aaKnown RBP12.82□□□□□ -0.36
SHROOM3-201ENST00000296043 YWHAGP61981 247 aaKnown RBP eCLIP12.82□□□□□ -0.36
SHROOM3-201ENST00000296043 RFX8Q6ZV50 586 aa12.82□□□□□ -0.36
SHROOM3-201ENST00000296043 KIFC3Q9BVG8 833 aa12.82□□□□□ -0.36
SHROOM3-201ENST00000296043 C6orf50Q9HD87 102 aa12.82□□□□□ -0.36
SHROOM3-201ENST00000296043 MSH6P52701 1360 aa12.82□□□□□ -0.36
SHROOM3-201ENST00000296043 PTPN23Q9H3S7 1636 aa12.82□□□□□ -0.36
SHROOM3-201ENST00000296043 NCF2P19878 526 aaPredicted RBP12.82□□□□□ -0.36
SHROOM3-201ENST00000296043 CHMP2BQ9UQN3 213 aa12.82□□□□□ -0.36
SHROOM3-201ENST00000296043 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.82□□□□□ -0.36
SHROOM3-201ENST00000296043 ARAP1Q96P48 1450 aa12.82□□□□□ -0.36
SHROOM3-201ENST00000296043 CASP10Q92851 521 aa12.82□□□□□ -0.36
SHROOM3-201ENST00000296043 IL17RAQ96F46 866 aa12.82□□□□□ -0.36
SHROOM3-201ENST00000296043 ESRRAP11474 423 aaPredicted RBP12.82□□□□□ -0.36
SHROOM3-201ENST00000296043 SOWAHDA6NJG2 315 aa12.82□□□□□ -0.36
SHROOM3-201ENST00000296043 ST5P78524 1137 aa12.82□□□□□ -0.36
SHROOM3-201ENST00000296043 PPP2R5EQ16537 467 aa12.82□□□□□ -0.36
SHROOM3-201ENST00000296043 NFU1Q9UMS0 254 aa12.82□□□□□ -0.36
SHROOM3-201ENST00000296043 TRPV6Q9H1D0 765 aa12.81□□□□□ -0.36
SHROOM3-201ENST00000296043 CNGB3Q9NQW8 809 aa12.81□□□□□ -0.36
SHROOM3-201ENST00000296043 DAPK3O43293 454 aa12.81□□□□□ -0.36
SHROOM3-201ENST00000296043 CCNT1O60563 726 aaKnown RBP12.81□□□□□ -0.36
SHROOM3-201ENST00000296043 CCDC85BQ15834 202 aaPredicted RBP12.81□□□□□ -0.36
SHROOM3-201ENST00000296043 MLXIPLQ9NP71 852 aa12.81□□□□□ -0.36
SHROOM3-201ENST00000296043 SPDYE3A6NKU9 549 aa12.81□□□□□ -0.36
SHROOM3-201ENST00000296043 PLS3P13797 630 aa12.81□□□□□ -0.36
SHROOM3-201ENST00000296043 NUMA1Q14980 2115 aa12.81□□□□□ -0.36
SHROOM3-201ENST00000296043 SLC27A2O14975 620 aa12.81□□□□□ -0.36
SHROOM3-201ENST00000296043 TCP1P17987 556 aaKnown RBP12.81□□□□□ -0.36
SHROOM3-201ENST00000296043 HLA-DPA1P20036 260 aa12.81□□□□□ -0.36
SHROOM3-201ENST00000296043 TRHP20396 242 aaPredicted RBP12.81□□□□□ -0.36
SHROOM3-201ENST00000296043 CDR2Q01850 454 aa12.81□□□□□ -0.36
SHROOM3-201ENST00000296043 ASPHQ12797 758 aa12.81□□□□□ -0.36
SHROOM3-201ENST00000296043 PPARGC1AQ9UBK2 798 aaKnown RBP12.81□□□□□ -0.36
SHROOM3-201ENST00000296043 PFKFB1P16118 471 aa12.81□□□□□ -0.36
SHROOM3-201ENST00000296043 CEP55Q53EZ4 464 aa12.81□□□□□ -0.36
SHROOM3-201ENST00000296043 TMTC4Q5T4D3 741 aa12.81□□□□□ -0.36
SHROOM3-201ENST00000296043 CDC5LQ99459 802 aaKnown RBP12.81□□□□□ -0.36
SHROOM3-201ENST00000296043 TEKT2Q9UIF3 430 aa12.81□□□□□ -0.36
SHROOM3-201ENST00000296043 BAZ2BQ9UIF8 2168 aaKnown RBP12.81□□□□□ -0.36
SHROOM3-201ENST00000296043 PLCD1P51178 756 aa12.81□□□□□ -0.36
SHROOM3-201ENST00000296043 BTKQ06187 659 aa12.81□□□□□ -0.36
SHROOM3-201ENST00000296043 OLFML1Q6UWY5 402 aa12.81□□□□□ -0.36
SHROOM3-201ENST00000296043 ANKRD13CQ8N6S4 541 aa12.81□□□□□ -0.36
SHROOM3-201ENST00000296043 PKD2L1Q9P0L9 805 aa12.81□□□□□ -0.36
SHROOM3-201ENST00000296043 KIAA1468Q9P260 1216 aa12.81□□□□□ -0.36
SHROOM3-201ENST00000296043 SLC12A1Q13621 1099 aa12.81□□□□□ -0.36
SHROOM3-201ENST00000296043 ZNF827Q17R98 1081 aa12.81□□□□□ -0.36
SHROOM3-201ENST00000296043 EHBP1L1Q8N3D4 1523 aa12.8□□□□□ -0.36
SHROOM3-201ENST00000296043 PLTPP55058 493 aa12.8□□□□□ -0.36
SHROOM3-201ENST00000296043 STOML1Q9UBI4 398 aa12.8□□□□□ -0.36
SHROOM3-201ENST00000296043 C11orf57Q6ZUT1 292 aaPredicted RBP12.8□□□□□ -0.36
SHROOM3-201ENST00000296043 TYW1Q9NV66 732 aaKnown RBP12.8□□□□□ -0.36
SHROOM3-201ENST00000296043 PI4KAP2A4QPH2 592 aa12.8□□□□□ -0.36
SHROOM3-201ENST00000296043 ACSL3O95573 720 aa12.8□□□□□ -0.36
SHROOM3-201ENST00000296043 ANXA1P04083 346 aa12.8□□□□□ -0.36
SHROOM3-201ENST00000296043 CTCFP49711 727 aaPredicted RBP12.8□□□□□ -0.36
SHROOM3-201ENST00000296043 PIK3AP1Q6ZUJ8 805 aa12.8□□□□□ -0.36
SHROOM3-201ENST00000296043 PI4KAP1Q8N8J0 262 aa12.8□□□□□ -0.36
SHROOM3-201ENST00000296043 TTC1Q99614 292 aa12.8□□□□□ -0.36
SHROOM3-201ENST00000296043 CRNKL1Q9BZJ0 848 aaKnown RBP12.8□□□□□ -0.36
SHROOM3-201ENST00000296043 CCDC195A0A1B0GUA6 201 aa12.8□□□□□ -0.36
SHROOM3-201ENST00000296043 GNL1P36915 607 aaPredicted RBP12.8□□□□□ -0.36
SHROOM3-201ENST00000296043 GRK7Q8WTQ7 553 aa12.8□□□□□ -0.36
SHROOM3-201ENST00000296043 BRD1O95696 1058 aa12.8□□□□□ -0.36
SHROOM3-201ENST00000296043 CEP85Q6P2H3 762 aa12.8□□□□□ -0.36
SHROOM3-201ENST00000296043 CD248Q9HCU0 757 aa12.8□□□□□ -0.36
SHROOM3-201ENST00000296043 RTEL1-TNFRSF6BF6WH68 1400 aa12.8□□□□□ -0.36
SHROOM3-201ENST00000296043 EP400NLQ6ZTU2 488 aa12.8□□□□□ -0.36
SHROOM3-201ENST00000296043 TESK2Q96S53 571 aa12.8□□□□□ -0.36
SHROOM3-201ENST00000296043 BZW2Q9Y6E2 419 aaKnown RBP12.8□□□□□ -0.36
SHROOM3-201ENST00000296043 FAM135AQ9P2D6 1515 aa12.8□□□□□ -0.36
SHROOM3-201ENST00000296043 RASGRF2O14827 1237 aa12.8□□□□□ -0.36
SHROOM3-201ENST00000296043 CYTH1Q15438 398 aa12.8□□□□□ -0.36
SHROOM3-201ENST00000296043 APOA1P02647 267 aa12.8□□□□□ -0.36
SHROOM3-201ENST00000296043 PA2G4Q9UQ80 394 aaKnown RBP12.8□□□□□ -0.36
SHROOM3-201ENST00000296043 KRT81Q14533 505 aa12.79□□□□□ -0.36
SHROOM3-201ENST00000296043 KAZNQ674X7 775 aa12.79□□□□□ -0.36
SHROOM3-201ENST00000296043 TUBB6Q9BUF5 446 aa12.79□□□□□ -0.36
SHROOM3-201ENST00000296043 EPN1Q9Y6I3 576 aaPredicted RBP12.79□□□□□ -0.36
SHROOM3-201ENST00000296043 LETM2Q2VYF4 491 aa12.79□□□□□ -0.36
SHROOM3-201ENST00000296043 OMA1Q96E52 524 aa12.79□□□□□ -0.36
SHROOM3-201ENST00000296043 EHD2Q9NZN4 543 aa12.79□□□□□ -0.36
SHROOM3-201ENST00000296043 H0YC42 278 aa12.79□□□□□ -0.36
SHROOM3-201ENST00000296043 ADCY3O60266 1144 aa12.79□□□□□ -0.36
SHROOM3-201ENST00000296043 LBHD1Q9BQE6 289 aaPredicted RBP12.79□□□□□ -0.36
SHROOM3-201ENST00000296043 CASP14P31944 242 aa12.79□□□□□ -0.36
SHROOM3-201ENST00000296043 TTC38Q5R3I4 469 aa12.79□□□□□ -0.36
SHROOM3-201ENST00000296043 TMTC2Q8N394 836 aa12.79□□□□□ -0.36
SHROOM3-201ENST00000296043 FIS1Q9Y3D6 152 aa12.79□□□□□ -0.36
SHROOM3-201ENST00000296043 SNUPNO95149 360 aaKnown RBP12.79□□□□□ -0.36
SHROOM3-201ENST00000296043 FAM186BQ8IYM0 893 aa12.79□□□□□ -0.36
SHROOM3-201ENST00000296043 PHKBQ93100 1093 aa12.79□□□□□ -0.36
SHROOM3-201ENST00000296043 ZMYM4Q5VZL5 1548 aa12.79□□□□□ -0.36
SHROOM3-201ENST00000296043 GUCY1A3Q02108 690 aa12.79□□□□□ -0.36
SHROOM3-201ENST00000296043 NT5C3AQ9H0P0 336 aa12.79□□□□□ -0.36
SHROOM3-201ENST00000296043 IQSEC3Q9UPP2 1182 aaPredicted RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms