RNA–Protein interactions for RNA: ENST00000295400.10

TGFA-201, Transcript of transforming growth factor alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFA, Length 4,310 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFA-201ENST00000295400 NDUFAB1O14561 156 aa12.89□□□□□ -0.35
TGFA-201ENST00000295400 DDAH1O94760 285 aa12.89□□□□□ -0.35
TGFA-201ENST00000295400 BRD3Q15059 726 aa12.89□□□□□ -0.35
TGFA-201ENST00000295400 PRR16Q569H4 304 aa12.89□□□□□ -0.35
TGFA-201ENST00000295400 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.89□□□□□ -0.35
TGFA-201ENST00000295400 DEPDC5O75140 1603 aa12.88□□□□□ -0.35
TGFA-201ENST00000295400 PRPF3O43395 683 aaKnown RBP12.88□□□□□ -0.35
TGFA-201ENST00000295400 PLCG1P19174 1290 aa12.88□□□□□ -0.35
TGFA-201ENST00000295400 ARHGAP44Q17R89 818 aa12.88□□□□□ -0.35
TGFA-201ENST00000295400 KCTD1Q719H9 257 aa12.88□□□□□ -0.35
TGFA-201ENST00000295400 NUP58Q9BVL2 599 aa12.88□□□□□ -0.35
TGFA-201ENST00000295400 EPB41L4AQ9HCS5 686 aaPredicted RBP12.88□□□□□ -0.35
TGFA-201ENST00000295400 PHLPP2Q6ZVD8 1323 aa12.88□□□□□ -0.35
TGFA-201ENST00000295400 GCNT3O95395 438 aa12.88□□□□□ -0.35
TGFA-201ENST00000295400 TERF2Q15554 542 aa12.88□□□□□ -0.35
TGFA-201ENST00000295400 NAA35Q5VZE5 725 aa12.88□□□□□ -0.35
TGFA-201ENST00000295400 GPBP1Q86WP2 473 aa12.88□□□□□ -0.35
TGFA-201ENST00000295400 CPXCR1Q8N123 301 aa12.88□□□□□ -0.35
TGFA-201ENST00000295400 RASSF4Q9H2L5 321 aa12.88□□□□□ -0.35
TGFA-201ENST00000295400 HAUS4Q9H6D7 363 aa12.88□□□□□ -0.35
TGFA-201ENST00000295400 ABCB6Q9NP58 842 aa12.88□□□□□ -0.35
TGFA-201ENST00000295400 SLC7A5Q01650 507 aa12.88□□□□□ -0.35
TGFA-201ENST00000295400 IFI16Q16666 785 aaKnown RBP12.88□□□□□ -0.35
TGFA-201ENST00000295400 KSR1Q8IVT5 923 aa12.88□□□□□ -0.35
TGFA-201ENST00000295400 STAG1Q8WVM7 1258 aa12.88□□□□□ -0.35
TGFA-201ENST00000295400 HPS3Q969F9 1004 aa12.88□□□□□ -0.35
TGFA-201ENST00000295400 CCDC51Q96ER9 411 aa12.88□□□□□ -0.35
TGFA-201ENST00000295400 ATP8A2Q9NTI2 1148 aa12.88□□□□□ -0.35
TGFA-201ENST00000295400 HDAC6Q9UBN7 1215 aa12.88□□□□□ -0.35
TGFA-201ENST00000295400 PPLO60437 1756 aa12.87□□□□□ -0.35
TGFA-201ENST00000295400 MROH1Q8NDA8 1641 aa12.87□□□□□ -0.35
TGFA-201ENST00000295400 LONP1P36776 959 aaKnown RBP12.87□□□□□ -0.35
TGFA-201ENST00000295400 ASIC2Q16515 512 aa12.87□□□□□ -0.35
TGFA-201ENST00000295400 SPICE1Q8N0Z3 855 aa12.87□□□□□ -0.35
TGFA-201ENST00000295400 OTUD6BQ8N6M0 293 aa12.87□□□□□ -0.35
TGFA-201ENST00000295400 PCDHA4Q9UN74 947 aa12.87□□□□□ -0.35
TGFA-201ENST00000295400 ARHGEF28Q8N1W1 1705 aaKnown RBP12.87□□□□□ -0.35
TGFA-201ENST00000295400 UBXN2AP68543 259 aa12.87□□□□□ -0.35
TGFA-201ENST00000295400 EHHADHQ08426 723 aa12.87□□□□□ -0.35
TGFA-201ENST00000295400 UBE2SQ16763 222 aa12.87□□□□□ -0.35
TGFA-201ENST00000295400 SFMBT2Q5VUG0 894 aa12.87□□□□□ -0.35
TGFA-201ENST00000295400 MSL1Q68DK7 614 aa12.87□□□□□ -0.35
TGFA-201ENST00000295400 GSPT2Q8IYD1 628 aaKnown RBP12.87□□□□□ -0.35
TGFA-201ENST00000295400 KANSL2Q9H9L4 492 aa12.87□□□□□ -0.35
TGFA-201ENST00000295400 ECM2O94769 699 aaPredicted RBP12.87□□□□□ -0.35
TGFA-201ENST00000295400 PRCPP42785 496 aa12.87□□□□□ -0.35
TGFA-201ENST00000295400 SNAP25P60880 206 aa12.87□□□□□ -0.35
TGFA-201ENST00000295400 C2orf54Q08AI8 447 aa12.87□□□□□ -0.35
TGFA-201ENST00000295400 WHAMMP3Q1A5X7 153 aa12.87□□□□□ -0.35
TGFA-201ENST00000295400 CCDC84Q86UT8 332 aaPredicted RBP12.87□□□□□ -0.35
TGFA-201ENST00000295400 TPH2Q8IWU9 490 aa12.87□□□□□ -0.35
TGFA-201ENST00000295400 UHMK1Q8TAS1 419 aaKnown RBP12.87□□□□□ -0.35
TGFA-201ENST00000295400 TSGA10Q9BZW7 698 aa12.87□□□□□ -0.35
TGFA-201ENST00000295400 HOMER2Q9NSB8 354 aa12.87□□□□□ -0.35
TGFA-201ENST00000295400 MINPP1Q9UNW1 487 aa12.87□□□□□ -0.35
TGFA-201ENST00000295400 KIAA1024Q9UPX6 916 aa12.87□□□□□ -0.35
TGFA-201ENST00000295400 UTYO14607 1347 aa12.87□□□□□ -0.35
TGFA-201ENST00000295400 MEIS1O00470 390 aa12.87□□□□□ -0.35
TGFA-201ENST00000295400 MFAP3LO75121 409 aa12.87□□□□□ -0.35
TGFA-201ENST00000295400 CCDC174Q6PII3 467 aa12.87□□□□□ -0.35
TGFA-201ENST00000295400 TMTC3Q6ZXV5 915 aa12.87□□□□□ -0.35
TGFA-201ENST00000295400 MYOCDQ8IZQ8 938 aa12.87□□□□□ -0.35
TGFA-201ENST00000295400 STAG2Q8N3U4 1231 aa12.87□□□□□ -0.35
TGFA-201ENST00000295400 KCNB2Q92953 911 aa12.87□□□□□ -0.35
TGFA-201ENST00000295400 PSTPIP2Q9H939 334 aa12.87□□□□□ -0.35
TGFA-201ENST00000295400 MRPL44Q9H9J2 332 aaKnown RBP12.87□□□□□ -0.35
TGFA-201ENST00000295400 PALLDQ8WX93 1383 aa12.86□□□□□ -0.35
TGFA-201ENST00000295400 GOLGA6L10A0A0M3HER8 536 aa12.86□□□□□ -0.35
TGFA-201ENST00000295400 NDUFA10O95299 355 aa12.86□□□□□ -0.35
TGFA-201ENST00000295400 ZNF658Q5TYW1 1059 aaPredicted RBP12.86□□□□□ -0.35
TGFA-201ENST00000295400 STXBP4Q6ZWJ1 553 aa12.86□□□□□ -0.35
TGFA-201ENST00000295400 MYCT1Q8N699 235 aa12.86□□□□□ -0.35
TGFA-201ENST00000295400 GJA10Q969M2 543 aa12.86□□□□□ -0.35
TGFA-201ENST00000295400 SHPRHQ149N8 1683 aa12.86□□□□□ -0.35
TGFA-201ENST00000295400 ERVV-1B6SEH8 477 aa12.86□□□□□ -0.35
TGFA-201ENST00000295400 TNNC1P63316 161 aa12.86□□□□□ -0.35
TGFA-201ENST00000295400 SH3RF3Q8TEJ3 882 aaPredicted RBP12.86□□□□□ -0.35
TGFA-201ENST00000295400 RBM17Q96I25 401 aaKnown RBP12.86□□□□□ -0.35
TGFA-201ENST00000295400 FAM204AQ9H8W3 233 aa12.86□□□□□ -0.35
TGFA-201ENST00000295400 TFR2Q9UP52 801 aa12.86□□□□□ -0.35
TGFA-201ENST00000295400 KCNK3O14649 394 aa12.86□□□□□ -0.35
TGFA-201ENST00000295400 TOM1O60784 492 aa12.86□□□□□ -0.35
TGFA-201ENST00000295400 PABPC4Q13310 644 aaKnown RBP eCLIP12.86□□□□□ -0.35
TGFA-201ENST00000295400 FBXO2Q9UK22 296 aaPredicted RBP12.86□□□□□ -0.35
TGFA-201ENST00000295400 PXDNQ92626 1479 aa12.85□□□□□ -0.35
TGFA-201ENST00000295400 MOCS3O95396 460 aa12.85□□□□□ -0.35
TGFA-201ENST00000295400 TUBBP07437 444 aa12.85□□□□□ -0.35
TGFA-201ENST00000295400 TCP11X2Q5H9J9 407 aa12.85□□□□□ -0.35
TGFA-201ENST00000295400 CPLX4Q7Z7G2 160 aa12.85□□□□□ -0.35
TGFA-201ENST00000295400 P2RX5Q93086 422 aa12.85□□□□□ -0.35
TGFA-201ENST00000295400 MRRFQ96E11 262 aaKnown RBP12.85□□□□□ -0.35
TGFA-201ENST00000295400 DNM3Q9UQ16 869 aa12.85□□□□□ -0.35
TGFA-201ENST00000295400 HARSP12081 509 aaKnown RBP12.85□□□□□ -0.35
TGFA-201ENST00000295400 CYP2J2P51589 502 aa12.85□□□□□ -0.35
TGFA-201ENST00000295400 HNRNPH2P55795 449 aaKnown RBP12.85□□□□□ -0.35
TGFA-201ENST00000295400 MICALCLQ6ZW33 695 aa12.85□□□□□ -0.35
TGFA-201ENST00000295400 FAM212AQ96EL1 285 aa12.85□□□□□ -0.35
TGFA-201ENST00000295400 DCP1AQ9NPI6 582 aaPredicted RBP12.85□□□□□ -0.35
TGFA-201ENST00000295400 FAM196BA6NMK8 535 aa12.85□□□□□ -0.35
TGFA-201ENST00000295400 EPB41P11171 864 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms