RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 PAGE5Q96GU1 130 aa5.32□□□□□ -1.56
UBR1-201ENST00000290650 ISCA1Q9BUE6 129 aa5.32□□□□□ -1.56
UBR1-201ENST00000290650 IMPACTQ9P2X3 320 aa5.32□□□□□ -1.56
UBR1-201ENST00000290650 PCDHA1Q9Y5I3 950 aa5.32□□□□□ -1.56
UBR1-201ENST00000290650 SRGAP2O75044 1071 aa5.32□□□□□ -1.56
UBR1-201ENST00000290650 BIRC3Q13489 604 aa5.32□□□□□ -1.56
UBR1-201ENST00000290650 MTF1Q14872 753 aa5.32□□□□□ -1.56
UBR1-201ENST00000290650 GSTA5Q7RTV2 222 aa5.32□□□□□ -1.56
UBR1-201ENST00000290650 NEK8Q86SG6 692 aa5.32□□□□□ -1.56
UBR1-201ENST00000290650 CCDC114Q96M63 670 aa5.32□□□□□ -1.56
UBR1-201ENST00000290650 IFIH1Q9BYX4 1025 aaKnown RBP5.32□□□□□ -1.56
UBR1-201ENST00000290650 USTQ9Y2C2 406 aa5.32□□□□□ -1.56
UBR1-201ENST00000290650 COL15A1P39059 1388 aa5.32□□□□□ -1.56
UBR1-201ENST00000290650 CDK8P49336 464 aa5.32□□□□□ -1.56
UBR1-201ENST00000290650 HS2ST1Q7LGA3 356 aa5.32□□□□□ -1.56
UBR1-201ENST00000290650 CNOT6LQ96LI5 555 aaKnown RBP5.32□□□□□ -1.56
UBR1-201ENST00000290650 SH2D3AQ9BRG2 576 aa5.32□□□□□ -1.56
UBR1-201ENST00000290650 CDCA7Q9BWT1 371 aaPredicted RBP5.32□□□□□ -1.56
UBR1-201ENST00000290650 GPR108Q9NPR9 543 aa5.32□□□□□ -1.56
UBR1-201ENST00000290650 TEX33O43247 280 aa5.31□□□□□ -1.56
UBR1-201ENST00000290650 EPB41P11171 864 aaKnown RBP5.31□□□□□ -1.56
UBR1-201ENST00000290650 RBM6P78332 1123 aaKnown RBP5.31□□□□□ -1.56
UBR1-201ENST00000290650 IRX5P78411 483 aaPredicted RBP5.31□□□□□ -1.56
UBR1-201ENST00000290650 SLC7A5Q01650 507 aa5.31□□□□□ -1.56
UBR1-201ENST00000290650 PLCB3Q01970 1234 aa5.31□□□□□ -1.56
UBR1-201ENST00000290650 RASSF7Q02833 373 aa5.31□□□□□ -1.56
UBR1-201ENST00000290650 DMTNQ08495 405 aa5.31□□□□□ -1.56
UBR1-201ENST00000290650 ASIC2Q16515 512 aa5.31□□□□□ -1.56
UBR1-201ENST00000290650 BBXQ8WY36 941 aaPredicted RBP5.31□□□□□ -1.56
UBR1-201ENST00000290650 PPP1R16BQ96T49 567 aa5.31□□□□□ -1.56
UBR1-201ENST00000290650 TFR2Q9UP52 801 aa5.31□□□□□ -1.56
UBR1-201ENST00000290650 DNM3Q9UQ16 869 aa5.31□□□□□ -1.56
UBR1-201ENST00000290650 FRMD4BQ9Y2L6 1034 aa5.31□□□□□ -1.56
UBR1-201ENST00000290650 AP5Z1O43299 807 aa5.31□□□□□ -1.56
UBR1-201ENST00000290650 SMC1AQ14683 1233 aaKnown RBP5.31□□□□□ -1.56
UBR1-201ENST00000290650 RASGRP2Q7LDG7 609 aa5.31□□□□□ -1.56
UBR1-201ENST00000290650 KRT25Q7Z3Z0 450 aa5.31□□□□□ -1.56
UBR1-201ENST00000290650 SEPT12Q8IYM1 358 aa5.31□□□□□ -1.56
UBR1-201ENST00000290650 IRX2Q9BZI1 471 aaPredicted RBP5.31□□□□□ -1.56
UBR1-201ENST00000290650 PCIF1Q9H4Z3 704 aa5.31□□□□□ -1.56
UBR1-201ENST00000290650 GOLGA6L10A0A0M3HER8 536 aa5.31□□□□□ -1.56
UBR1-201ENST00000290650 ARHGEF35A5YM69 484 aa5.31□□□□□ -1.56
UBR1-201ENST00000290650 USP17L15C9J2P7 530 aa5.31□□□□□ -1.56
UBR1-201ENST00000290650 USP17L13C9JLJ4 530 aa5.31□□□□□ -1.56
UBR1-201ENST00000290650 USP17L11C9JVI0 530 aa5.31□□□□□ -1.56
UBR1-201ENST00000290650 USP17L18D6R9N7 530 aa5.31□□□□□ -1.56
UBR1-201ENST00000290650 USP17L22D6RA61 530 aa5.31□□□□□ -1.56
UBR1-201ENST00000290650 USP17L17D6RBQ6 530 aa5.31□□□□□ -1.56
UBR1-201ENST00000290650 USP17L19D6RCP7 530 aa5.31□□□□□ -1.56
UBR1-201ENST00000290650 USP17L20D6RJB6 530 aa5.31□□□□□ -1.56
UBR1-201ENST00000290650 CEP104O60308 925 aa5.31□□□□□ -1.56
UBR1-201ENST00000290650 RFX5P48382 616 aaPredicted RBP5.31□□□□□ -1.56
UBR1-201ENST00000290650 COPB1P53618 953 aaKnown RBP5.31□□□□□ -1.56
UBR1-201ENST00000290650 ICA1Q05084 483 aa5.31□□□□□ -1.56
UBR1-201ENST00000290650 CKAP4Q07065 602 aaKnown RBP5.31□□□□□ -1.56
UBR1-201ENST00000290650 USP17L24Q0WX57 530 aa5.31□□□□□ -1.56
UBR1-201ENST00000290650 USP17L6PQ6QN14 398 aa5.31□□□□□ -1.56
UBR1-201ENST00000290650 FMR1NBQ8N0W7 255 aaPredicted RBP5.31□□□□□ -1.56
UBR1-201ENST00000290650 LINC00116Q8NCU8 138 aa5.31□□□□□ -1.56
UBR1-201ENST00000290650 CSRNP1Q96S65 589 aa5.31□□□□□ -1.56
UBR1-201ENST00000290650 NAA15Q9BXJ9 866 aaKnown RBP5.31□□□□□ -1.56
UBR1-201ENST00000290650 MROH7-TTC4A0A0A0MT08 1334 aa5.31□□□□□ -1.56
UBR1-201ENST00000290650 XDHP47989 1333 aa5.31□□□□□ -1.56
UBR1-201ENST00000290650 MAGEA1P43355 309 aa5.31□□□□□ -1.56
UBR1-201ENST00000290650 ANTXR2P58335 489 aa5.31□□□□□ -1.56
UBR1-201ENST00000290650 IPO4Q8TEX9 1081 aaKnown RBP5.31□□□□□ -1.56
UBR1-201ENST00000290650 SECISBP2LQ93073 1101 aaKnown RBP5.31□□□□□ -1.56
UBR1-201ENST00000290650 CCDC127Q96BQ5 260 aa5.31□□□□□ -1.56
UBR1-201ENST00000290650 FOXP1Q9H334 677 aaPredicted RBP5.31□□□□□ -1.56
UBR1-201ENST00000290650 EPB41L4AQ9HCS5 686 aaPredicted RBP5.31□□□□□ -1.56
UBR1-201ENST00000290650 PCDHA4Q9UN74 947 aa5.31□□□□□ -1.56
UBR1-201ENST00000290650 LRRN2O75325 713 aa5.31□□□□□ -1.56
UBR1-201ENST00000290650 POTEJP0CG39 1038 aa5.31□□□□□ -1.56
UBR1-201ENST00000290650 VPS41P49754 854 aa5.31□□□□□ -1.56
UBR1-201ENST00000290650 DLGAP5Q15398 846 aa5.31□□□□□ -1.56
UBR1-201ENST00000290650 GSPT2Q8IYD1 628 aaKnown RBP5.31□□□□□ -1.56
UBR1-201ENST00000290650 CEP95Q96GE4 821 aa5.31□□□□□ -1.56
UBR1-201ENST00000290650 FAM84BQ96KN1 310 aaPredicted RBP5.31□□□□□ -1.56
UBR1-201ENST00000290650 ARHGEF10LQ9HCE6 1279 aa5.31□□□□□ -1.56
UBR1-201ENST00000290650 ATF5Q9Y2D1 282 aaPredicted RBP5.31□□□□□ -1.56
UBR1-201ENST00000290650 C2orf54Q08AI8 447 aa5.31□□□□□ -1.56
UBR1-201ENST00000290650 KLHL30Q0D2K2 578 aa5.31□□□□□ -1.56
UBR1-201ENST00000290650 NFIXQ14938 502 aa5.31□□□□□ -1.56
UBR1-201ENST00000290650 FAM102BQ5T8I3 360 aa5.31□□□□□ -1.56
UBR1-201ENST00000290650 SLFN13Q68D06 897 aa5.31□□□□□ -1.56
UBR1-201ENST00000290650 PIGOQ8TEQ8 1089 aa5.31□□□□□ -1.56
UBR1-201ENST00000290650 TUBGCP2Q9BSJ2 902 aa5.31□□□□□ -1.56
UBR1-201ENST00000290650 PAGR1Q9BTK6 254 aa5.31□□□□□ -1.56
UBR1-201ENST00000290650 LRRC27Q9C0I9 530 aa5.31□□□□□ -1.56
UBR1-201ENST00000290650 ST7Q9NRC1 585 aa5.31□□□□□ -1.56
UBR1-201ENST00000290650 AFDNP55196 1824 aaKnown RBP5.31□□□□□ -1.56
UBR1-201ENST00000290650 C21orf2O43822 256 aa5.3□□□□□ -1.56
UBR1-201ENST00000290650 PPP6R2O75170 966 aa5.3□□□□□ -1.56
UBR1-201ENST00000290650 GBP2P32456 591 aaPredicted RBP5.3□□□□□ -1.56
UBR1-201ENST00000290650 STAT3P40763 770 aa5.3□□□□□ -1.56
UBR1-201ENST00000290650 ATP1A2P50993 1020 aa5.3□□□□□ -1.56
UBR1-201ENST00000290650 MKRN3Q13064 507 aaKnown RBP5.3□□□□□ -1.56
UBR1-201ENST00000290650 SPATA1Q5VX52 437 aa5.3□□□□□ -1.56
UBR1-201ENST00000290650 STXBP4Q6ZWJ1 553 aa5.3□□□□□ -1.56
UBR1-201ENST00000290650 EEPD1Q7L9B9 569 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms