RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 RAD51AP2Q09MP3 1159 aa12.62□□□□□ -0.39
NPC1L1-201ENST00000289547 RABGGTAQ92696 567 aa12.62□□□□□ -0.39
NPC1L1-201ENST00000289547 PDLIM2Q96JY6 352 aa12.62□□□□□ -0.39
NPC1L1-201ENST00000289547 FAM204AQ9H8W3 233 aa12.62□□□□□ -0.39
NPC1L1-201ENST00000289547 MED4Q9NPJ6 270 aa12.62□□□□□ -0.39
NPC1L1-201ENST00000289547 NFE2L3Q9Y4A8 694 aa12.62□□□□□ -0.39
NPC1L1-201ENST00000289547 NLRP12P59046 1061 aa12.62□□□□□ -0.39
NPC1L1-201ENST00000289547 NAA30Q147X3 362 aaPredicted RBP12.62□□□□□ -0.39
NPC1L1-201ENST00000289547 AGBL3Q8NEM8 1001 aa12.62□□□□□ -0.39
NPC1L1-201ENST00000289547 ZSCAN10Q96SZ4 725 aaPredicted RBP12.62□□□□□ -0.39
NPC1L1-201ENST00000289547 VPS16Q9H269 839 aa12.62□□□□□ -0.39
NPC1L1-201ENST00000289547 ZSCAN20P17040 1043 aaPredicted RBP12.61□□□□□ -0.39
NPC1L1-201ENST00000289547 RPS6KB1P23443 525 aa12.61□□□□□ -0.39
NPC1L1-201ENST00000289547 MXRA7P84157 204 aa12.61□□□□□ -0.39
NPC1L1-201ENST00000289547 ARID5AQ03989 594 aa12.61□□□□□ -0.39
NPC1L1-201ENST00000289547 SETDB1Q15047 1291 aa12.61□□□□□ -0.39
NPC1L1-201ENST00000289547 APBB1IPQ7Z5R6 666 aaPredicted RBP12.61□□□□□ -0.39
NPC1L1-201ENST00000289547 EDC3Q96F86 508 aaKnown RBP12.61□□□□□ -0.39
NPC1L1-201ENST00000289547 CAPS2Q9BXY5 557 aa12.61□□□□□ -0.39
NPC1L1-201ENST00000289547 STAP2Q9UGK3 403 aa12.61□□□□□ -0.39
NPC1L1-201ENST00000289547 HGSO14964 777 aaPredicted RBP12.61□□□□□ -0.39
NPC1L1-201ENST00000289547 ADKP55263 362 aaKnown RBP12.61□□□□□ -0.39
NPC1L1-201ENST00000289547 NLRX1Q86UT6 975 aa12.61□□□□□ -0.39
NPC1L1-201ENST00000289547 FCHSD1Q86WN1 690 aa12.61□□□□□ -0.39
NPC1L1-201ENST00000289547 KCNK9Q9NPC2 374 aa12.61□□□□□ -0.39
NPC1L1-201ENST00000289547 SPTLC3Q9NUV7 552 aa12.61□□□□□ -0.39
NPC1L1-201ENST00000289547 EXOC1Q9NV70 894 aa12.61□□□□□ -0.39
NPC1L1-201ENST00000289547 FAN1Q9Y2M0 1017 aa12.61□□□□□ -0.39
NPC1L1-201ENST00000289547 STK24Q9Y6E0 443 aa12.61□□□□□ -0.39
NPC1L1-201ENST00000289547 ZNF202O95125 648 aa12.61□□□□□ -0.39
NPC1L1-201ENST00000289547 TTLL1O95922 423 aa12.61□□□□□ -0.39
NPC1L1-201ENST00000289547 CSF1RP07333 972 aa12.61□□□□□ -0.39
NPC1L1-201ENST00000289547 GNPTABQ3T906 1256 aa12.61□□□□□ -0.39
NPC1L1-201ENST00000289547 ZMYM1Q5SVZ6 1142 aa12.61□□□□□ -0.39
NPC1L1-201ENST00000289547 ANKRD35Q8N283 1001 aa12.61□□□□□ -0.39
NPC1L1-201ENST00000289547 TDRD3Q9H7E2 651 aaKnown RBP12.61□□□□□ -0.39
NPC1L1-201ENST00000289547 PPANQ9NQ55 473 aaKnown RBP12.61□□□□□ -0.39
NPC1L1-201ENST00000289547 HOMER2Q9NSB8 354 aa12.61□□□□□ -0.39
NPC1L1-201ENST00000289547 PALD1Q9ULE6 856 aa12.61□□□□□ -0.39
NPC1L1-201ENST00000289547 PPP2R2CQ9Y2T4 447 aa12.61□□□□□ -0.39
NPC1L1-201ENST00000289547 RIPOR2Q9Y4F9 1068 aa12.61□□□□□ -0.39
NPC1L1-201ENST00000289547 POLRMTO00411 1230 aaKnown RBP12.61□□□□□ -0.39
NPC1L1-201ENST00000289547 ADCY7P51828 1080 aa12.61□□□□□ -0.39
NPC1L1-201ENST00000289547 RABL6Q3YEC7 729 aaPredicted RBP12.61□□□□□ -0.39
NPC1L1-201ENST00000289547 TRMT1LQ7Z2T5 733 aaKnown RBP12.61□□□□□ -0.39
NPC1L1-201ENST00000289547 DPP9Q86TI2 863 aa12.61□□□□□ -0.39
NPC1L1-201ENST00000289547 FHDC1Q9C0D6 1143 aaPredicted RBP12.61□□□□□ -0.39
NPC1L1-201ENST00000289547 MRVI1Q9Y6F6 885 aa12.61□□□□□ -0.39
NPC1L1-201ENST00000289547 MAP2P11137 1827 aaKnown RBP12.61□□□□□ -0.39
NPC1L1-201ENST00000289547 SRGNP10124 158 aa12.6□□□□□ -0.39
NPC1L1-201ENST00000289547 STAT6P42226 847 aa12.6□□□□□ -0.39
NPC1L1-201ENST00000289547 ATP1A2P50993 1020 aa12.6□□□□□ -0.39
NPC1L1-201ENST00000289547 DAAM2Q86T65 1068 aa12.6□□□□□ -0.39
NPC1L1-201ENST00000289547 JPH2Q9BR39 696 aaPredicted RBP12.6□□□□□ -0.39
NPC1L1-201ENST00000289547 SPATS2LQ9NUQ6 558 aaKnown RBP12.6□□□□□ -0.39
NPC1L1-201ENST00000289547 MTMR6Q9Y217 621 aa12.6□□□□□ -0.39
NPC1L1-201ENST00000289547 NALCNQ8IZF0 1738 aa12.6□□□□□ -0.39
NPC1L1-201ENST00000289547 GPATCH4Q5T3I0 446 aaKnown RBP12.6□□□□□ -0.39
NPC1L1-201ENST00000289547 CYP26C1Q6V0L0 522 aa12.6□□□□□ -0.39
NPC1L1-201ENST00000289547 SLF1Q9BQI6 1058 aa12.6□□□□□ -0.39
NPC1L1-201ENST00000289547 PLEKHA4Q9H4M7 779 aa12.6□□□□□ -0.39
NPC1L1-201ENST00000289547 MROH7-TTC4A0A0A0MT08 1334 aa12.6□□□□□ -0.39
NPC1L1-201ENST00000289547 TRIM75PA6NK02 468 aa12.6□□□□□ -0.39
NPC1L1-201ENST00000289547 MYCLP12524 364 aaPredicted RBP12.6□□□□□ -0.39
NPC1L1-201ENST00000289547 KRT13P13646 458 aa12.6□□□□□ -0.39
NPC1L1-201ENST00000289547 HOXD10P28358 340 aa12.6□□□□□ -0.39
NPC1L1-201ENST00000289547 DYNLL1P63167 89 aaKnown RBP12.6□□□□□ -0.39
NPC1L1-201ENST00000289547 TMTC1Q8IUR5 882 aa12.6□□□□□ -0.39
NPC1L1-201ENST00000289547 PPP1R13BQ96KQ4 1090 aa12.6□□□□□ -0.39
NPC1L1-201ENST00000289547 ATRNO75882 1429 aa12.6□□□□□ -0.39
NPC1L1-201ENST00000289547 PXDNLA1KZ92 1463 aa12.6□□□□□ -0.39
NPC1L1-201ENST00000289547 HSPD1P10809 573 aaKnown RBP12.6□□□□□ -0.39
NPC1L1-201ENST00000289547 DESP17661 470 aa12.6□□□□□ -0.39
NPC1L1-201ENST00000289547 KRT9P35527 623 aa12.6□□□□□ -0.39
NPC1L1-201ENST00000289547 INTS8Q75QN2 995 aaKnown RBP12.6□□□□□ -0.39
NPC1L1-201ENST00000289547 MIGA2Q7L4E1 593 aa12.6□□□□□ -0.39
NPC1L1-201ENST00000289547 FAM84BQ96KN1 310 aaPredicted RBP12.6□□□□□ -0.39
NPC1L1-201ENST00000289547 WRNIP1Q96S55 665 aa12.6□□□□□ -0.39
NPC1L1-201ENST00000289547 ODF2LQ9ULJ1 636 aa12.6□□□□□ -0.39
NPC1L1-201ENST00000289547 ABCC12Q96J65 1359 aa12.59□□□□□ -0.39
NPC1L1-201ENST00000289547 RNASE9P60153 205 aaKnown RBP12.59□□□□□ -0.39
NPC1L1-201ENST00000289547 RBBP5Q15291 538 aaKnown RBP12.59□□□□□ -0.39
NPC1L1-201ENST00000289547 ZNF827Q17R98 1081 aa12.59□□□□□ -0.39
NPC1L1-201ENST00000289547 TDRD7Q8NHU6 1098 aaKnown RBP12.59□□□□□ -0.39
NPC1L1-201ENST00000289547 CCDC77Q9BR77 488 aa12.59□□□□□ -0.39
NPC1L1-201ENST00000289547 TLR7Q9NYK1 1049 aaKnown RBP12.59□□□□□ -0.39
NPC1L1-201ENST00000289547 RASAL2Q9UJF2 1139 aa12.59□□□□□ -0.39
NPC1L1-201ENST00000289547 ALAS1P13196 640 aa12.59□□□□□ -0.39
NPC1L1-201ENST00000289547 GMPSP49915 693 aaPredicted RBP12.59□□□□□ -0.39
NPC1L1-201ENST00000289547 USH1GQ495M9 461 aa12.59□□□□□ -0.39
NPC1L1-201ENST00000289547 KRT79Q5XKE5 535 aa12.59□□□□□ -0.39
NPC1L1-201ENST00000289547 IFT20Q8IY31 132 aa12.59□□□□□ -0.39
NPC1L1-201ENST00000289547 PSMB7Q99436 277 aa12.59□□□□□ -0.39
NPC1L1-201ENST00000289547 TRIM7Q9C029 511 aa12.59□□□□□ -0.39
NPC1L1-201ENST00000289547 AZI2Q9H6S1 392 aa12.59□□□□□ -0.39
NPC1L1-201ENST00000289547 ABCC6O95255 1503 aa12.59□□□□□ -0.39
NPC1L1-201ENST00000289547 MAGEA9P43362 315 aa12.59□□□□□ -0.39
NPC1L1-201ENST00000289547 PDIA6Q15084 440 aa12.59□□□□□ -0.39
NPC1L1-201ENST00000289547 CCDC38Q502W7 563 aa12.59□□□□□ -0.39
NPC1L1-201ENST00000289547 ANO1Q5XXA6 986 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms