RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 SRGAP1Q7Z6B7 1085 aa17.77■□□□□ 0.44
SMAD6-201ENST00000288840 ZC3H12CQ9C0D7 883 aaKnown RBP17.77■□□□□ 0.44
SMAD6-201ENST00000288840 TMEM260Q9NX78 707 aa17.77■□□□□ 0.44
SMAD6-201ENST00000288840 MYO6Q9UM54 1294 aa17.77■□□□□ 0.44
SMAD6-201ENST00000288840 PAFAH1B1P43034 410 aa17.77■□□□□ 0.44
SMAD6-201ENST00000288840 NFIXQ14938 502 aa17.77■□□□□ 0.44
SMAD6-201ENST00000288840 CALCRLQ16602 461 aa17.77■□□□□ 0.44
SMAD6-201ENST00000288840 PTF1AQ7RTS3 328 aa17.77■□□□□ 0.44
SMAD6-201ENST00000288840 FAM114A1Q8IWE2 563 aa17.77■□□□□ 0.44
SMAD6-201ENST00000288840 RIOK1Q9BRS2 568 aaKnown RBP17.77■□□□□ 0.44
SMAD6-201ENST00000288840 TTC26A0AVF1 554 aa17.77■□□□□ 0.43
SMAD6-201ENST00000288840 TMCO5BA8MYB1 307 aa17.76■□□□□ 0.43
SMAD6-201ENST00000288840 BUB1O43683 1085 aa17.76■□□□□ 0.43
SMAD6-201ENST00000288840 OR52Z1P0C646 297 aa17.76■□□□□ 0.43
SMAD6-201ENST00000288840 PFKFB3Q16875 520 aaPredicted RBP17.76■□□□□ 0.43
SMAD6-201ENST00000288840 ZNF658Q5TYW1 1059 aaPredicted RBP17.76■□□□□ 0.43
SMAD6-201ENST00000288840 HDXQ7Z353 690 aa17.76■□□□□ 0.43
SMAD6-201ENST00000288840 SLC51AQ86UW1 340 aa17.76■□□□□ 0.43
SMAD6-201ENST00000288840 CNOT6LQ96LI5 555 aaKnown RBP17.76■□□□□ 0.43
SMAD6-201ENST00000288840 TMEM47Q9BQJ4 181 aa17.76■□□□□ 0.43
SMAD6-201ENST00000288840 DISC1Q9NRI5 854 aa17.76■□□□□ 0.43
SMAD6-201ENST00000288840 FCER1AP12319 257 aa17.76■□□□□ 0.43
SMAD6-201ENST00000288840 SEC23AQ15436 765 aa17.76■□□□□ 0.43
SMAD6-201ENST00000288840 DPP8Q6V1X1 898 aaPredicted RBP17.76■□□□□ 0.43
SMAD6-201ENST00000288840 C10orf67Q8IYJ2 551 aa17.76■□□□□ 0.43
SMAD6-201ENST00000288840 FBXL16Q8N461 479 aa17.76■□□□□ 0.43
SMAD6-201ENST00000288840 LINC00116Q8NCU8 138 aa17.76■□□□□ 0.43
SMAD6-201ENST00000288840 IFT81Q8WYA0 676 aa17.76■□□□□ 0.43
SMAD6-201ENST00000288840 FAM107BQ9H098 131 aa17.76■□□□□ 0.43
SMAD6-201ENST00000288840 ADD3Q9UEY8 706 aaKnown RBP17.76■□□□□ 0.43
SMAD6-201ENST00000288840 GGA1Q9UJY5 639 aa17.76■□□□□ 0.43
SMAD6-201ENST00000288840 FAM196BA6NMK8 535 aa17.76■□□□□ 0.43
SMAD6-201ENST00000288840 H7C1D1 291 aa17.76■□□□□ 0.43
SMAD6-201ENST00000288840 HLTFQ14527 1009 aaKnown RBP eCLIP17.76■□□□□ 0.43
SMAD6-201ENST00000288840 UBE2SQ16763 222 aa17.76■□□□□ 0.43
SMAD6-201ENST00000288840 TXNRD1Q16881 649 aa17.76■□□□□ 0.43
SMAD6-201ENST00000288840 ANKRD65E5RJM6 399 aa17.75■□□□□ 0.43
SMAD6-201ENST00000288840 ZBTB22O15209 634 aa17.75■□□□□ 0.43
SMAD6-201ENST00000288840 LONP1P36776 959 aaKnown RBP17.75■□□□□ 0.43
SMAD6-201ENST00000288840 USH1GQ495M9 461 aa17.75■□□□□ 0.43
SMAD6-201ENST00000288840 ABHD10Q9NUJ1 306 aa17.75■□□□□ 0.43
SMAD6-201ENST00000288840 GYPCP04921 128 aa17.75■□□□□ 0.43
SMAD6-201ENST00000288840 DPYDQ12882 1025 aa17.75■□□□□ 0.43
SMAD6-201ENST00000288840 TRIM65Q6PJ69 517 aa17.75■□□□□ 0.43
SMAD6-201ENST00000288840 GSPT2Q8IYD1 628 aaKnown RBP17.75■□□□□ 0.43
SMAD6-201ENST00000288840 RABGGTAQ92696 567 aa17.75■□□□□ 0.43
SMAD6-201ENST00000288840 CDCA7Q9BWT1 371 aaPredicted RBP17.75■□□□□ 0.43
SMAD6-201ENST00000288840 LRRC37A3O60309 1634 aa17.75■□□□□ 0.43
SMAD6-201ENST00000288840 MED1Q15648 1581 aaPredicted RBP17.75■□□□□ 0.43
SMAD6-201ENST00000288840 BICDL2A1A5D9 508 aa17.75■□□□□ 0.43
SMAD6-201ENST00000288840 KLK7P49862 253 aa17.75■□□□□ 0.43
SMAD6-201ENST00000288840 ATP2C1P98194 919 aaPredicted RBP17.75■□□□□ 0.43
SMAD6-201ENST00000288840 RAPGEF1Q13905 1077 aa17.75■□□□□ 0.43
SMAD6-201ENST00000288840 PLS1Q14651 629 aa17.75■□□□□ 0.43
SMAD6-201ENST00000288840 CC2D1AQ6P1N0 951 aaPredicted RBP17.75■□□□□ 0.43
SMAD6-201ENST00000288840 FCHSD1Q86WN1 690 aa17.75■□□□□ 0.43
SMAD6-201ENST00000288840 CCDC43Q96MW1 224 aaKnown RBP17.75■□□□□ 0.43
SMAD6-201ENST00000288840 NAA15Q9BXJ9 866 aaKnown RBP17.75■□□□□ 0.43
SMAD6-201ENST00000288840 ABCB6Q9NP58 842 aa17.75■□□□□ 0.43
SMAD6-201ENST00000288840 SAR1BQ9Y6B6 198 aa17.75■□□□□ 0.43
SMAD6-201ENST00000288840 A0A1B0GTH6 734 aa17.74■□□□□ 0.43
SMAD6-201ENST00000288840 POTEMA6NI47 508 aa17.74■□□□□ 0.43
SMAD6-201ENST00000288840 CACNB3P54284 484 aa17.74■□□□□ 0.43
SMAD6-201ENST00000288840 KCTD1Q719H9 257 aa17.74■□□□□ 0.43
SMAD6-201ENST00000288840 KRT26Q7Z3Y9 468 aa17.74■□□□□ 0.43
SMAD6-201ENST00000288840 NEK8Q86SG6 692 aa17.74■□□□□ 0.43
SMAD6-201ENST00000288840 SMCR8Q8TEV9 937 aaPredicted RBP17.74■□□□□ 0.43
SMAD6-201ENST00000288840 SPAG5Q96R06 1193 aa17.74■□□□□ 0.43
SMAD6-201ENST00000288840 TACC1O75410 805 aa17.74■□□□□ 0.43
SMAD6-201ENST00000288840 NDUFA10O95299 355 aa17.74■□□□□ 0.43
SMAD6-201ENST00000288840 SNAP25P60880 206 aa17.74■□□□□ 0.43
SMAD6-201ENST00000288840 ST5P78524 1137 aa17.74■□□□□ 0.43
SMAD6-201ENST00000288840 HERC4Q5GLZ8 1057 aaPredicted RBP17.74■□□□□ 0.43
SMAD6-201ENST00000288840 XDHP47989 1333 aa17.74■□□□□ 0.43
SMAD6-201ENST00000288840 PANX2Q96RD6 677 aa17.74■□□□□ 0.43
SMAD6-201ENST00000288840 HSD3B7Q9H2F3 369 aa17.74■□□□□ 0.43
SMAD6-201ENST00000288840 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.74■□□□□ 0.433e-6■■■■■ 130.4
SMAD6-201ENST00000288840 ZNF446Q9NWS9 450 aa17.74■□□□□ 0.43
SMAD6-201ENST00000288840 ABL1P00519 1130 aa17.73■□□□□ 0.43
SMAD6-201ENST00000288840 PRPF4BQ13523 1007 aaKnown RBP17.73■□□□□ 0.43
SMAD6-201ENST00000288840 MAP9Q49MG5 647 aa17.73■□□□□ 0.43
SMAD6-201ENST00000288840 DCAF17Q5H9S7 520 aaPredicted RBP17.73■□□□□ 0.43
SMAD6-201ENST00000288840 RWDD2AQ9UIY3 292 aa17.73■□□□□ 0.43
SMAD6-201ENST00000288840 RGPD5Q99666 1765 aa17.73■□□□□ 0.43
SMAD6-201ENST00000288840 PPP1R3GB7ZBB8 358 aa17.73■□□□□ 0.43
SMAD6-201ENST00000288840 POTEB2H3BUK9 544 aa17.73■□□□□ 0.43
SMAD6-201ENST00000288840 ALS2CR12Q96Q35 445 aa17.73■□□□□ 0.43
SMAD6-201ENST00000288840 IFIH1Q9BYX4 1025 aaKnown RBP17.73■□□□□ 0.43
SMAD6-201ENST00000288840 L2HGDHQ9H9P8 463 aa17.73■□□□□ 0.43
SMAD6-201ENST00000288840 BCCIPQ9P287 314 aaKnown RBP eCLIP17.73■□□□□ 0.43
SMAD6-201ENST00000288840 TCEAL9Q9UHQ7 104 aa17.73■□□□□ 0.43
SMAD6-201ENST00000288840 MRFAP1Q9Y605 127 aa17.73■□□□□ 0.43
SMAD6-201ENST00000288840 FAM205AQ6ZU69 1335 aa17.73■□□□□ 0.43
SMAD6-201ENST00000288840 CNTNAP5Q8WYK1 1306 aa17.73■□□□□ 0.43
SMAD6-201ENST00000288840 USP17L5A8MUK1 530 aa17.73■□□□□ 0.43
SMAD6-201ENST00000288840 KRT25Q7Z3Z0 450 aa17.73■□□□□ 0.43
SMAD6-201ENST00000288840 ARHGEF1Q92888 912 aaKnown RBP17.73■□□□□ 0.43
SMAD6-201ENST00000288840 AGPAT5Q9NUQ2 364 aa17.73■□□□□ 0.43
SMAD6-201ENST00000288840 PKD2L1Q9P0L9 805 aa17.73■□□□□ 0.43
SMAD6-201ENST00000288840 MAGEA1P43355 309 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms