RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 CALM1P0DP23 149 aa14.94□□□□□ -0.02
SCAF4-201ENST00000286835 CALM2P0DP24 149 aa14.94□□□□□ -0.02
SCAF4-201ENST00000286835 CALM3P0DP25 149 aa14.94□□□□□ -0.02
SCAF4-201ENST00000286835 RRAGAQ7L523 313 aa14.94□□□□□ -0.02
SCAF4-201ENST00000286835 RWDD2AQ9UIY3 292 aa14.94□□□□□ -0.02
SCAF4-201ENST00000286835 FAM114A1Q8IWE2 563 aa14.94□□□□□ -0.02
SCAF4-201ENST00000286835 OTUD6BQ8N6M0 293 aa14.94□□□□□ -0.02
SCAF4-201ENST00000286835 TAF4BQ92750 862 aa14.94□□□□□ -0.02
SCAF4-201ENST00000286835 SMARCAL1Q9NZC9 954 aa14.94□□□□□ -0.02
SCAF4-201ENST00000286835 MROH5Q6ZUA9 1318 aa14.94□□□□□ -0.02
SCAF4-201ENST00000286835 PPP1R3GB7ZBB8 358 aa14.94□□□□□ -0.02
SCAF4-201ENST00000286835 SCG2P13521 617 aa14.94□□□□□ -0.02
SCAF4-201ENST00000286835 NAPAP54920 295 aa14.94□□□□□ -0.02
SCAF4-201ENST00000286835 DPYDQ12882 1025 aa14.94□□□□□ -0.02
SCAF4-201ENST00000286835 ZNF658Q5TYW1 1059 aaPredicted RBP14.94□□□□□ -0.02
SCAF4-201ENST00000286835 SELENOOQ9BVL4 669 aa14.94□□□□□ -0.02
SCAF4-201ENST00000286835 SLC39A2Q9NP94 309 aa14.94□□□□□ -0.02
SCAF4-201ENST00000286835 FAM53CQ9NYF3 392 aa14.94□□□□□ -0.02
SCAF4-201ENST00000286835 JRKLQ9Y4A0 524 aa14.94□□□□□ -0.02
SCAF4-201ENST00000286835 MEGF6O75095 1541 aa14.94□□□□□ -0.02
SCAF4-201ENST00000286835 TMCO5BA8MYB1 307 aa14.93□□□□□ -0.02
SCAF4-201ENST00000286835 OPA1O60313 960 aa14.93□□□□□ -0.02
SCAF4-201ENST00000286835 GOLGA8HP0CJ92 632 aa14.93□□□□□ -0.02
SCAF4-201ENST00000286835 MAGEA1P43355 309 aa14.93□□□□□ -0.02
SCAF4-201ENST00000286835 SMIM5Q71RC9 77 aa14.93□□□□□ -0.02
SCAF4-201ENST00000286835 CALML4Q96GE6 196 aa14.93□□□□□ -0.02
SCAF4-201ENST00000286835 CAPS2Q9BXY5 557 aa14.93□□□□□ -0.02
SCAF4-201ENST00000286835 CRNKL1Q9BZJ0 848 aaKnown RBP14.93□□□□□ -0.02
SCAF4-201ENST00000286835 CTDP1Q9Y5B0 961 aaPredicted RBP14.93□□□□□ -0.02
SCAF4-201ENST00000286835 DUSP10Q9Y6W6 482 aa14.93□□□□□ -0.02
SCAF4-201ENST00000286835 CALML3P27482 149 aa14.93□□□□□ -0.02
SCAF4-201ENST00000286835 INPP5BP32019 993 aa14.93□□□□□ -0.02
SCAF4-201ENST00000286835 VAV2P52735 878 aa14.93□□□□□ -0.02
SCAF4-201ENST00000286835 CFAP58Q5T655 872 aa14.93□□□□□ -0.02
SCAF4-201ENST00000286835 MB21D1Q8N884 522 aa14.93□□□□□ -0.02
SCAF4-201ENST00000286835 NHEJ1Q9H9Q4 299 aaPredicted RBP14.93□□□□□ -0.02
SCAF4-201ENST00000286835 AGPAT5Q9NUQ2 364 aa14.93□□□□□ -0.02
SCAF4-201ENST00000286835 CCNT1O60563 726 aaKnown RBP14.93□□□□□ -0.02
SCAF4-201ENST00000286835 MOCS3O95396 460 aa14.93□□□□□ -0.02
SCAF4-201ENST00000286835 FBXL16Q8N461 479 aa14.93□□□□□ -0.02
SCAF4-201ENST00000286835 MYO1AQ9UBC5 1043 aa14.93□□□□□ -0.02
SCAF4-201ENST00000286835 TRPC5Q9UL62 973 aaPredicted RBP14.93□□□□□ -0.02
SCAF4-201ENST00000286835 TXKP42681 527 aa14.92□□□□□ -0.02
SCAF4-201ENST00000286835 KLK7P49862 253 aa14.92□□□□□ -0.02
SCAF4-201ENST00000286835 DNM2P50570 870 aa14.92□□□□□ -0.02
SCAF4-201ENST00000286835 CDR1P51861 262 aa14.92□□□□□ -0.02
SCAF4-201ENST00000286835 STAG1Q8WVM7 1258 aa14.92□□□□□ -0.02
SCAF4-201ENST00000286835 RNF225M0QZC1 329 aaPredicted RBP14.92□□□□□ -0.02
SCAF4-201ENST00000286835 MPHOSPH10O00566 681 aaKnown RBP14.92□□□□□ -0.02
SCAF4-201ENST00000286835 TSPY3P0CV98 308 aa14.92□□□□□ -0.02
SCAF4-201ENST00000286835 TSPY8P0CW00 308 aa14.92□□□□□ -0.02
SCAF4-201ENST00000286835 USP14P54578 494 aa14.92□□□□□ -0.02
SCAF4-201ENST00000286835 CNOT6LQ96LI5 555 aaKnown RBP14.92□□□□□ -0.02
SCAF4-201ENST00000286835 MED15Q96RN5 788 aa14.92□□□□□ -0.02
SCAF4-201ENST00000286835 SARSP49591 514 aaKnown RBP14.92□□□□□ -0.02
SCAF4-201ENST00000286835 BLIDQ8IZY5 108 aa14.92□□□□□ -0.02
SCAF4-201ENST00000286835 PPFIA4O75335 1185 aa14.92□□□□□ -0.02
SCAF4-201ENST00000286835 CHRNDQ07001 517 aa14.92□□□□□ -0.02
SCAF4-201ENST00000286835 MSL1Q68DK7 614 aa14.92□□□□□ -0.02
SCAF4-201ENST00000286835 KLHL7Q8IXQ5 586 aa14.92□□□□□ -0.02
SCAF4-201ENST00000286835 MLXIPQ9HAP2 919 aa14.92□□□□□ -0.02
SCAF4-201ENST00000286835 LUC7LQ9NQ29 371 aaKnown RBP14.92□□□□□ -0.02
SCAF4-201ENST00000286835 TBC1D7Q9P0N9 293 aa14.92□□□□□ -0.02
SCAF4-201ENST00000286835 SEC63Q9UGP8 760 aaKnown RBP14.92□□□□□ -0.02
SCAF4-201ENST00000286835 IL6STP40189 918 aaPredicted RBP14.91□□□□□ -0.02
SCAF4-201ENST00000286835 MAGEA9P43362 315 aa14.91□□□□□ -0.02
SCAF4-201ENST00000286835 FAM196AQ6ZSG2 479 aa14.91□□□□□ -0.02
SCAF4-201ENST00000286835 HPS3Q969F9 1004 aa14.91□□□□□ -0.02
SCAF4-201ENST00000286835 USP8P40818 1118 aa14.91□□□□□ -0.02
SCAF4-201ENST00000286835 TECP42680 631 aa14.91□□□□□ -0.02
SCAF4-201ENST00000286835 TFAP4Q01664 338 aa14.91□□□□□ -0.02
SCAF4-201ENST00000286835 SEPT12Q8IYM1 358 aa14.91□□□□□ -0.02
SCAF4-201ENST00000286835 CPVLQ9H3G5 476 aa14.91□□□□□ -0.02
SCAF4-201ENST00000286835 BICDL2A1A5D9 508 aa14.91□□□□□ -0.02
SCAF4-201ENST00000286835 WNT7AO00755 349 aa14.91□□□□□ -0.02
SCAF4-201ENST00000286835 AMPD3Q01432 767 aa14.91□□□□□ -0.02
SCAF4-201ENST00000286835 LRRC31Q6UY01 552 aa14.91□□□□□ -0.02
SCAF4-201ENST00000286835 UBA5Q9GZZ9 404 aa14.91□□□□□ -0.02
SCAF4-201ENST00000286835 SETD1AO15047 1707 aaKnown RBP14.9□□□□□ -0.02
SCAF4-201ENST00000286835 MAP2K7O14733 419 aa14.9□□□□□ -0.02
SCAF4-201ENST00000286835 CABP7Q86V35 215 aa14.9□□□□□ -0.02
SCAF4-201ENST00000286835 ZC3H12CQ9C0D7 883 aaKnown RBP14.9□□□□□ -0.02
SCAF4-201ENST00000286835 CAPN7Q9Y6W3 813 aa14.9□□□□□ -0.02
SCAF4-201ENST00000286835 ESYT3A0FGR9 886 aa14.9□□□□□ -0.02
SCAF4-201ENST00000286835 PRPF3O43395 683 aaKnown RBP14.9□□□□□ -0.02
SCAF4-201ENST00000286835 NCK2O43639 380 aa14.9□□□□□ -0.02
SCAF4-201ENST00000286835 ARID4AP29374 1257 aaPredicted RBP14.9□□□□□ -0.02
SCAF4-201ENST00000286835 HNRNPLLQ8WVV9 542 aaKnown RBP14.9□□□□□ -0.02
SCAF4-201ENST00000286835 SEPT11Q9NVA2 429 aaKnown RBP14.9□□□□□ -0.02
SCAF4-201ENST00000286835 SAP30BPQ9UHR5 308 aaKnown RBP14.9□□□□□ -0.02
SCAF4-201ENST00000286835 XDHP47989 1333 aa14.9□□□□□ -0.02
SCAF4-201ENST00000286835 CYP2D6P10635 497 aa14.9□□□□□ -0.02
SCAF4-201ENST00000286835 HMGB2P26583 209 aaKnown RBP14.9□□□□□ -0.02
SCAF4-201ENST00000286835 RASSF7Q02833 373 aa14.9□□□□□ -0.02
SCAF4-201ENST00000286835 PDCLQ13371 301 aa14.9□□□□□ -0.02
SCAF4-201ENST00000286835 TICAM2Q86XR7 235 aa14.9□□□□□ -0.02
SCAF4-201ENST00000286835 MSANTD4Q8NCY6 345 aa14.9□□□□□ -0.02
SCAF4-201ENST00000286835 COG1Q8WTW3 980 aa14.9□□□□□ -0.02
SCAF4-201ENST00000286835 EHD2Q9NZN4 543 aa14.9□□□□□ -0.02
SCAF4-201ENST00000286835 CSF1RP07333 972 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms