RNA–Protein interactions for RNA: ENST00000286398.11

SMC2-201, Transcript of structural maintenance of chromosomes 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC2, Length 5,992 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-201ENST00000286398 TRIM60Q495X7 471 aa9.92□□□□□ -0.82
SMC2-201ENST00000286398 CDKL2Q92772 493 aa9.92□□□□□ -0.82
SMC2-201ENST00000286398 LZTS1Q9Y250 596 aa9.92□□□□□ -0.82
SMC2-201ENST00000286398 TADA3O75528 432 aa9.92□□□□□ -0.82
SMC2-201ENST00000286398 PLTPP55058 493 aa9.92□□□□□ -0.82
SMC2-201ENST00000286398 PKP1Q13835 747 aa9.92□□□□□ -0.82
SMC2-201ENST00000286398 NBPF9Q3BBW0 867 aa9.92□□□□□ -0.82
SMC2-201ENST00000286398 MUM1L1Q5H9M0 696 aa9.92□□□□□ -0.82
SMC2-201ENST00000286398 TMTC4Q5T4D3 741 aa9.92□□□□□ -0.82
SMC2-201ENST00000286398 CYTH2Q99418 400 aa9.92□□□□□ -0.82
SMC2-201ENST00000286398 DBNDD2Q9BQY9 259 aa9.92□□□□□ -0.82
SMC2-201ENST00000286398 ADAM21Q9UKJ8 722 aa9.92□□□□□ -0.82
SMC2-201ENST00000286398 NOVA2Q9UNW9 492 aaKnown RBP9.92□□□□□ -0.82
SMC2-201ENST00000286398 KDM1AO60341 852 aa9.92□□□□□ -0.82
SMC2-201ENST00000286398 DNAJC6O75061 913 aa9.92□□□□□ -0.82
SMC2-201ENST00000286398 GARSP41250 739 aaKnown RBP9.92□□□□□ -0.82
SMC2-201ENST00000286398 STX1BP61266 288 aa9.92□□□□□ -0.82
SMC2-201ENST00000286398 DHX9Q08211 1270 aaKnown RBP9.92□□□□□ -0.82
SMC2-201ENST00000286398 DKC1O60832 514 aaKnown RBP eCLIP9.92□□□□□ -0.82
SMC2-201ENST00000286398 CDC25BP30305 580 aa9.92□□□□□ -0.82
SMC2-201ENST00000286398 RASSF7Q02833 373 aa9.92□□□□□ -0.82
SMC2-201ENST00000286398 MSH6P52701 1360 aa9.92□□□□□ -0.82
SMC2-201ENST00000286398 KRT81Q14533 505 aa9.92□□□□□ -0.82
SMC2-201ENST00000286398 NBPF20Q3BBV1 942 aa9.92□□□□□ -0.82
SMC2-201ENST00000286398 ALS2CLQ60I27 953 aa9.92□□□□□ -0.82
SMC2-201ENST00000286398 CYP4F22Q6NT55 531 aa9.92□□□□□ -0.82
SMC2-201ENST00000286398 RINLQ6ZS11 566 aa9.92□□□□□ -0.82
SMC2-201ENST00000286398 VPS54Q9P1Q0 977 aa9.92□□□□□ -0.82
SMC2-201ENST00000286398 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.92□□□□□ -0.82
SMC2-201ENST00000286398 TNNI1P19237 187 aa9.91□□□□□ -0.82
SMC2-201ENST00000286398 RFC4P35249 363 aa9.91□□□□□ -0.82
SMC2-201ENST00000286398 CASP2P42575 452 aa9.91□□□□□ -0.82
SMC2-201ENST00000286398 DDX28Q9NUL7 540 aaKnown RBP9.91□□□□□ -0.82
SMC2-201ENST00000286398 TRPC6Q9Y210 931 aa9.91□□□□□ -0.82
SMC2-201ENST00000286398 PTPN22Q9Y2R2 807 aa9.91□□□□□ -0.82
SMC2-201ENST00000286398 TSC22D4Q9Y3Q8 395 aa9.91□□□□□ -0.82
SMC2-201ENST00000286398 TIAM1Q13009 1591 aa9.91□□□□□ -0.82
SMC2-201ENST00000286398 KRT14P02533 472 aa9.91□□□□□ -0.82
SMC2-201ENST00000286398 KRT19P08727 400 aa9.91□□□□□ -0.82
SMC2-201ENST00000286398 SLCO1A2P46721 670 aa9.91□□□□□ -0.82
SMC2-201ENST00000286398 OCA2Q04671 838 aa9.91□□□□□ -0.82
SMC2-201ENST00000286398 SEPT2Q15019 361 aa9.91□□□□□ -0.82
SMC2-201ENST00000286398 NME8Q8N427 588 aa9.91□□□□□ -0.82
SMC2-201ENST00000286398 ARMT1Q9H993 441 aa9.91□□□□□ -0.82
SMC2-201ENST00000286398 SPC25Q9HBM1 224 aa9.91□□□□□ -0.82
SMC2-201ENST00000286398 PAIP2BQ9ULR5 123 aaKnown RBP9.91□□□□□ -0.82
SMC2-201ENST00000286398 SUFUQ9UMX1 484 aa9.91□□□□□ -0.82
SMC2-201ENST00000286398 EIF4E1BA6NMX2 242 aaKnown RBP9.91□□□□□ -0.82
SMC2-201ENST00000286398 H0Y3Z8 333 aa9.91□□□□□ -0.82
SMC2-201ENST00000286398 COPB1P53618 953 aaKnown RBP9.91□□□□□ -0.82
SMC2-201ENST00000286398 DEUP1Q05D60 604 aa9.91□□□□□ -0.82
SMC2-201ENST00000286398 SCYL2Q6P3W7 929 aa9.91□□□□□ -0.82
SMC2-201ENST00000286398 KBTBD3Q8NAB2 608 aa9.91□□□□□ -0.82
SMC2-201ENST00000286398 POMGNT1Q8WZA1 660 aa9.91□□□□□ -0.82
SMC2-201ENST00000286398 NT5C3AQ9H0P0 336 aa9.91□□□□□ -0.82
SMC2-201ENST00000286398 HAUS2Q9NVX0 235 aa9.91□□□□□ -0.82
SMC2-201ENST00000286398 NIP7Q9Y221 180 aaKnown RBP eCLIP9.91□□□□□ -0.82
SMC2-201ENST00000286398 hCG_1642624A0A1W2PR95 340 aa9.91□□□□□ -0.82
SMC2-201ENST00000286398 MSH2P43246 934 aa9.91□□□□□ -0.82
SMC2-201ENST00000286398 ADCY7P51828 1080 aa9.91□□□□□ -0.82
SMC2-201ENST00000286398 PSMC1P62191 440 aaKnown RBP9.91□□□□□ -0.82
SMC2-201ENST00000286398 TMEM259Q4ZIN3 620 aa9.91□□□□□ -0.82
SMC2-201ENST00000286398 TNNI3KQ59H18 835 aa9.91□□□□□ -0.82
SMC2-201ENST00000286398 TRMT10CQ7L0Y3 403 aaKnown RBP9.91□□□□□ -0.82
SMC2-201ENST00000286398 MCUQ8NE86 351 aa9.91□□□□□ -0.82
SMC2-201ENST00000286398 SETDB2Q96T68 719 aa9.91□□□□□ -0.82
SMC2-201ENST00000286398 FPGT-TNNI3KV9GXZ4 949 aa9.91□□□□□ -0.82
SMC2-201ENST00000286398 IRS4O14654 1257 aaPredicted RBP9.91□□□□□ -0.82
SMC2-201ENST00000286398 CYP2J2P51589 502 aa9.91□□□□□ -0.82
SMC2-201ENST00000286398 GYS2P54840 703 aa9.91□□□□□ -0.82
SMC2-201ENST00000286398 ST5P78524 1137 aa9.91□□□□□ -0.82
SMC2-201ENST00000286398 UIMC1Q96RL1 719 aa9.91□□□□□ -0.82
SMC2-201ENST00000286398 TMED2Q15363 201 aa9.9□□□□□ -0.82
SMC2-201ENST00000286398 ABCB6Q9NP58 842 aa9.9□□□□□ -0.82
SMC2-201ENST00000286398 PCDHA7Q9UN72 937 aa9.9□□□□□ -0.82
SMC2-201ENST00000286398 PARD3Q8TEW0 1356 aa9.9□□□□□ -0.82
SMC2-201ENST00000286398 SLC4A1P02730 911 aa9.9□□□□□ -0.82
SMC2-201ENST00000286398 ECE1P42892 770 aa9.9□□□□□ -0.82
SMC2-201ENST00000286398 ACTN3Q08043 901 aaPredicted RBP9.9□□□□□ -0.82
SMC2-201ENST00000286398 NUGGCQ68CJ6 796 aa9.9□□□□□ -0.82
SMC2-201ENST00000286398 FGD4Q96M96 766 aa9.9□□□□□ -0.82
SMC2-201ENST00000286398 RIOK1Q9BRS2 568 aaKnown RBP9.9□□□□□ -0.82
SMC2-201ENST00000286398 ZC3H12CQ9C0D7 883 aaKnown RBP9.9□□□□□ -0.82
SMC2-201ENST00000286398 SMYD2Q9NRG4 433 aa9.9□□□□□ -0.82
SMC2-201ENST00000286398 TRPC5Q9UL62 973 aaPredicted RBP9.9□□□□□ -0.82
SMC2-201ENST00000286398 POLR3AO14802 1390 aaPredicted RBP9.9□□□□□ -0.82
SMC2-201ENST00000286398 E9PMD0 336 aa9.9□□□□□ -0.82
SMC2-201ENST00000286398 TRIM37O94972 964 aa9.9□□□□□ -0.82
SMC2-201ENST00000286398 PDHA1P08559 390 aa9.9□□□□□ -0.82
SMC2-201ENST00000286398 MRPS15P82914 257 aaKnown RBP9.9□□□□□ -0.82
SMC2-201ENST00000286398 PDCLQ13371 301 aa9.9□□□□□ -0.82
SMC2-201ENST00000286398 KAZNQ674X7 775 aa9.9□□□□□ -0.82
SMC2-201ENST00000286398 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.9□□□□□ -0.82
SMC2-201ENST00000286398 EYA2O00167 538 aa9.9□□□□□ -0.83
SMC2-201ENST00000286398 PGRMC1O00264 195 aaKnown RBP9.9□□□□□ -0.83
SMC2-201ENST00000286398 LMNAP02545 664 aaKnown RBP9.9□□□□□ -0.83
SMC2-201ENST00000286398 NDUFA8P51970 172 aa9.9□□□□□ -0.83
SMC2-201ENST00000286398 C2orf54Q08AI8 447 aa9.9□□□□□ -0.83
SMC2-201ENST00000286398 AKAP4Q5JQC9 854 aa9.9□□□□□ -0.83
SMC2-201ENST00000286398 TRIM50Q86XT4 487 aa9.9□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms