RNA–Protein interactions for RNA: ENST00000285199.11

USP43-201, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP43, Length 4,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-201ENST00000285199 ZBTB21Q9ULJ3 1066 aa17.38■□□□□ 0.37
USP43-201ENST00000285199 CCDC172P0C7W6 258 aa17.38■□□□□ 0.37
USP43-201ENST00000285199 SLCO1A2P46721 670 aa17.38■□□□□ 0.37
USP43-201ENST00000285199 CTSWP56202 376 aa17.38■□□□□ 0.37
USP43-201ENST00000285199 NFRKBQ6P4R8 1299 aa17.38■□□□□ 0.37
USP43-201ENST00000285199 AP1M1Q9BXS5 423 aa17.38■□□□□ 0.37
USP43-201ENST00000285199 NSRP1Q9H0G5 558 aaKnown RBP17.38■□□□□ 0.37
USP43-201ENST00000285199 TMEM2Q9UHN6 1383 aa17.38■□□□□ 0.37
USP43-201ENST00000285199 MED23Q9ULK4 1368 aa17.38■□□□□ 0.37
USP43-201ENST00000285199 GOLGA8KD6RF30 607 aa17.38■□□□□ 0.37
USP43-201ENST00000285199 E9PCH4 1651 aa17.37■□□□□ 0.37
USP43-201ENST00000285199 ZBTB16Q05516 673 aa17.37■□□□□ 0.37
USP43-201ENST00000285199 NONOQ15233 471 aaKnown RBP eCLIP17.37■□□□□ 0.37
USP43-201ENST00000285199 RUFY4Q6ZNE9 571 aa17.37■□□□□ 0.37
USP43-201ENST00000285199 TBC1D5Q92609 795 aa17.37■□□□□ 0.37
USP43-201ENST00000285199 KAZALD1Q96I82 304 aa17.37■□□□□ 0.37
USP43-201ENST00000285199 UTP11Q9Y3A2 253 aaKnown RBP17.37■□□□□ 0.37
USP43-201ENST00000285199 SMCO2A6NFE2 343 aa17.37■□□□□ 0.37
USP43-201ENST00000285199 PRCPP42785 496 aa17.37■□□□□ 0.37
USP43-201ENST00000285199 U2AF1L4Q8WU68 220 aaKnown RBP17.37■□□□□ 0.37
USP43-201ENST00000285199 TSGA10IPQ3SY00 556 aa17.37■□□□□ 0.37
USP43-201ENST00000285199 ARHGEF25Q86VW2 580 aa17.37■□□□□ 0.37
USP43-201ENST00000285199 CCDC50Q8IVM0 306 aa17.37■□□□□ 0.37
USP43-201ENST00000285199 GLI2P10070 1586 aa17.36■□□□□ 0.37
USP43-201ENST00000285199 PCK1P35558 622 aa17.36■□□□□ 0.37
USP43-201ENST00000285199 PNMA1Q8ND90 353 aa17.36■□□□□ 0.37
USP43-201ENST00000285199 LMBR1Q8WVP7 490 aa17.36■□□□□ 0.37
USP43-201ENST00000285199 HPS3Q969F9 1004 aa17.36■□□□□ 0.37
USP43-201ENST00000285199 BPIFA3Q9BQP9 254 aa17.36■□□□□ 0.37
USP43-201ENST00000285199 ADAMTS1Q9UHI8 967 aa17.36■□□□□ 0.37
USP43-201ENST00000285199 ZFYVE16Q7Z3T8 1539 aa17.36■□□□□ 0.37
USP43-201ENST00000285199 A0A0U1RQJ8 604 aa17.36■□□□□ 0.37
USP43-201ENST00000285199 CETN3O15182 167 aa17.36■□□□□ 0.37
USP43-201ENST00000285199 NMT2O60551 498 aa17.36■□□□□ 0.37
USP43-201ENST00000285199 EEF2P13639 858 aaKnown RBP17.36■□□□□ 0.37
USP43-201ENST00000285199 SF3B2Q13435 895 aaKnown RBP17.36■□□□□ 0.37
USP43-201ENST00000285199 MMS22LQ6ZRQ5 1243 aa17.36■□□□□ 0.37
USP43-201ENST00000285199 GSTA5Q7RTV2 222 aa17.36■□□□□ 0.37
USP43-201ENST00000285199 CETN1Q12798 172 aa17.36■□□□□ 0.37
USP43-201ENST00000285199 UBE3CQ15386 1083 aa17.36■□□□□ 0.37
USP43-201ENST00000285199 NLRP3Q96P20 1036 aa17.36■□□□□ 0.37
USP43-201ENST00000285199 ODF2LQ9ULJ1 636 aa17.36■□□□□ 0.37
USP43-201ENST00000285199 ATP8A1Q9Y2Q0 1164 aa17.36■□□□□ 0.37
USP43-201ENST00000285199 GCKP35557 465 aa17.36■□□□□ 0.37
USP43-201ENST00000285199 GUCY1A3Q02108 690 aa17.36■□□□□ 0.37
USP43-201ENST00000285199 CALCOCO2Q13137 446 aa17.36■□□□□ 0.37
USP43-201ENST00000285199 CAPN12Q6ZSI9 719 aa17.36■□□□□ 0.37
USP43-201ENST00000285199 TGFBRAP1Q8WUH2 860 aa17.36■□□□□ 0.37
USP43-201ENST00000285199 UNC13BO14795 1591 aa17.35■□□□□ 0.37
USP43-201ENST00000285199 SPOPO43791 374 aa17.35■□□□□ 0.37
USP43-201ENST00000285199 ZKSCAN8Q15776 578 aaPredicted RBP17.35■□□□□ 0.37
USP43-201ENST00000285199 HIBCHQ6NVY1 386 aaPredicted RBP17.35■□□□□ 0.37
USP43-201ENST00000285199 TEX11Q8IYF3 940 aa17.35■□□□□ 0.37
USP43-201ENST00000285199 STRBPQ96SI9 672 aaKnown RBP17.35■□□□□ 0.37
USP43-201ENST00000285199 RASAL2Q9UJF2 1139 aa17.35■□□□□ 0.37
USP43-201ENST00000285199 MYO1AQ9UBC5 1043 aa17.35■□□□□ 0.37
USP43-201ENST00000285199 MTRF1LQ9UGC7 380 aaKnown RBP17.35■□□□□ 0.37
USP43-201ENST00000285199 FAM184BQ9ULE4 1060 aa17.35■□□□□ 0.37
USP43-201ENST00000285199 ATP6V0A2Q9Y487 856 aa17.35■□□□□ 0.37
USP43-201ENST00000285199 CALCRLQ16602 461 aa17.35■□□□□ 0.37
USP43-201ENST00000285199 GKAP1Q5VSY0 366 aaPredicted RBP17.35■□□□□ 0.37
USP43-201ENST00000285199 USPL1Q5W0Q7 1092 aa17.35■□□□□ 0.37
USP43-201ENST00000285199 TMC4Q7Z404 712 aa17.35■□□□□ 0.37
USP43-201ENST00000285199 EHD2Q9NZN4 543 aa17.35■□□□□ 0.37
USP43-201ENST00000285199 NOVA2Q9UNW9 492 aaKnown RBP17.35■□□□□ 0.37
USP43-201ENST00000285199 LDHCP07864 332 aa17.34■□□□□ 0.37
USP43-201ENST00000285199 ANTXR2P58335 489 aa17.34■□□□□ 0.37
USP43-201ENST00000285199 RASGRF1Q13972 1273 aa17.34■□□□□ 0.37
USP43-201ENST00000285199 FAM133BQ5BKY9 247 aaKnown RBP17.34■□□□□ 0.37
USP43-201ENST00000285199 VSIG1Q86XK7 387 aa17.34■□□□□ 0.37
USP43-201ENST00000285199 MB21D1Q8N884 522 aa17.34■□□□□ 0.37
USP43-201ENST00000285199 FAM212AQ96EL1 285 aa17.34■□□□□ 0.37
USP43-201ENST00000285199 SLC24A3Q9HC58 644 aa17.34■□□□□ 0.37
USP43-201ENST00000285199 LDHBP07195 334 aaKnown RBP17.34■□□□□ 0.37
USP43-201ENST00000285199 NR1D1P20393 614 aa17.34■□□□□ 0.37
USP43-201ENST00000285199 NCAPHQ15003 741 aa17.34■□□□□ 0.37
USP43-201ENST00000285199 MCTP2Q6DN12 878 aa17.34■□□□□ 0.37
USP43-201ENST00000285199 HOOK3Q86VS8 718 aa17.34■□□□□ 0.37
USP43-201ENST00000285199 CCDC65Q8IXS2 484 aa17.34■□□□□ 0.37
USP43-201ENST00000285199 ZBTB38Q8NAP3 1195 aaPredicted RBP17.34■□□□□ 0.37
USP43-201ENST00000285199 N4BP2L2Q92802 583 aaPredicted RBP17.34■□□□□ 0.37
USP43-201ENST00000285199 LRRC1Q9BTT6 524 aa17.34■□□□□ 0.37
USP43-201ENST00000285199 LRRC27Q9C0I9 530 aa17.34■□□□□ 0.37
USP43-201ENST00000285199 QRICH2Q9H0J4 1663 aa17.34■□□□□ 0.37
USP43-201ENST00000285199 EPHB4P54760 987 aa17.34■□□□□ 0.37
USP43-201ENST00000285199 PPP2R5AQ15172 486 aa17.34■□□□□ 0.37
USP43-201ENST00000285199 ZRSR2Q15696 482 aaKnown RBP17.34■□□□□ 0.37
USP43-201ENST00000285199 ZNF658Q5TYW1 1059 aaPredicted RBP17.34■□□□□ 0.37
USP43-201ENST00000285199 RBM43Q6ZSC3 357 aaKnown RBP17.34■□□□□ 0.37
USP43-201ENST00000285199 CTTNBP2NLQ9P2B4 639 aa17.34■□□□□ 0.37
USP43-201ENST00000285199 KRT14P02533 472 aa17.33■□□□□ 0.37
USP43-201ENST00000285199 KIF11P52732 1056 aa17.33■□□□□ 0.37
USP43-201ENST00000285199 CROCC2H7BZ55 1655 aa17.33■□□□□ 0.37
USP43-201ENST00000285199 FRMPD2Q68DX3 1309 aaPredicted RBP17.33■□□□□ 0.37
USP43-201ENST00000285199 CCDC105Q8IYK2 499 aa17.33■□□□□ 0.36
USP43-201ENST00000285199 COG1Q8WTW3 980 aa17.33■□□□□ 0.36
USP43-201ENST00000285199 AGPAT5Q9NUQ2 364 aa17.33■□□□□ 0.36
USP43-201ENST00000285199 RGS16O15492 202 aaPredicted RBP17.33■□□□□ 0.36
USP43-201ENST00000285199 TNFAIP3P21580 790 aa17.33■□□□□ 0.36
USP43-201ENST00000285199 CETN2P41208 172 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms