RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 FAM221BA6H8Z2 402 aa5.73□□□□□ -1.49
CD44-202ENST00000278385 F6X3S4 739 aa5.73□□□□□ -1.49
CD44-202ENST00000278385 ANP32CO43423 234 aa5.73□□□□□ -1.49
CD44-202ENST00000278385 NRDCO43847 1150 aa5.73□□□□□ -1.49
CD44-202ENST00000278385 PGRP06401 933 aa5.73□□□□□ -1.49
CD44-202ENST00000278385 CYP7A1P22680 504 aa5.73□□□□□ -1.49
CD44-202ENST00000278385 EIF4A3P38919 411 aaKnown RBP5.73□□□□□ -1.49
CD44-202ENST00000278385 FAM160A1Q05DH4 1040 aa5.73□□□□□ -1.49
CD44-202ENST00000278385 HLTFQ14527 1009 aaKnown RBP eCLIP5.73□□□□□ -1.49
CD44-202ENST00000278385 INPP5AQ14642 412 aa5.73□□□□□ -1.49
CD44-202ENST00000278385 BRD3Q15059 726 aa5.73□□□□□ -1.49
CD44-202ENST00000278385 BRDTQ58F21 947 aaPredicted RBP5.73□□□□□ -1.49
CD44-202ENST00000278385 RASIP1Q5U651 963 aa5.73□□□□□ -1.49
CD44-202ENST00000278385 HOMER1Q86YM7 354 aa5.73□□□□□ -1.49
CD44-202ENST00000278385 RASGRP4Q8TDF6 673 aa5.73□□□□□ -1.49
CD44-202ENST00000278385 GATAD2BQ8WXI9 593 aa5.73□□□□□ -1.49
CD44-202ENST00000278385 GAL3ST3Q96A11 431 aa5.73□□□□□ -1.49
CD44-202ENST00000278385 ZNF408Q9H9D4 720 aa5.73□□□□□ -1.49
CD44-202ENST00000278385 CHST12Q9NRB3 414 aa5.73□□□□□ -1.49
CD44-202ENST00000278385 ARHGEF5Q12774 1597 aa5.72□□□□□ -1.49
CD44-202ENST00000278385 KLF4O43474 513 aa5.72□□□□□ -1.49
CD44-202ENST00000278385 LRIG2O94898 1065 aa5.72□□□□□ -1.49
CD44-202ENST00000278385 FOSP01100 380 aaPredicted RBP5.72□□□□□ -1.49
CD44-202ENST00000278385 TGFB1P01137 390 aa5.72□□□□□ -1.49
CD44-202ENST00000278385 F13BP05160 661 aa5.72□□□□□ -1.49
CD44-202ENST00000278385 SSBP05455 408 aaKnown RBP eCLIP5.72□□□□□ -1.49
CD44-202ENST00000278385 MYL1P05976 194 aa5.72□□□□□ -1.49
CD44-202ENST00000278385 FAM87AP0C7U9 286 aa5.72□□□□□ -1.49
CD44-202ENST00000278385 CALRP27797 417 aaKnown RBP5.72□□□□□ -1.49
CD44-202ENST00000278385 SSTR4P31391 388 aa5.72□□□□□ -1.49
CD44-202ENST00000278385 GRK4P32298 578 aa5.72□□□□□ -1.49
CD44-202ENST00000278385 YARSP54577 528 aaKnown RBP5.72□□□□□ -1.49
CD44-202ENST00000278385 CDK5R2Q13319 367 aa5.72□□□□□ -1.49
CD44-202ENST00000278385 RAB33AQ14088 237 aa5.72□□□□□ -1.49
CD44-202ENST00000278385 MPP2Q14168 576 aa5.72□□□□□ -1.49
CD44-202ENST00000278385 PPP2R5AQ15172 486 aa5.72□□□□□ -1.49
CD44-202ENST00000278385 CYFIP1Q7L576 1253 aa5.72□□□□□ -1.49
CD44-202ENST00000278385 KRT26Q7Z3Y9 468 aa5.72□□□□□ -1.49
CD44-202ENST00000278385 ZDHHC13Q8IUH4 622 aa5.72□□□□□ -1.49
CD44-202ENST00000278385 THEMISQ8N1K5 641 aaPredicted RBP5.72□□□□□ -1.49
CD44-202ENST00000278385 MFSD2AQ8NA29 543 aa5.72□□□□□ -1.49
CD44-202ENST00000278385 CXorf38Q8TB03 319 aa5.72□□□□□ -1.49
CD44-202ENST00000278385 SEC16BQ96JE7 1060 aa5.72□□□□□ -1.49
CD44-202ENST00000278385 FOXQ1Q9C009 403 aa5.72□□□□□ -1.49
CD44-202ENST00000278385 RRP7BPQ9NSQ0 103 aa5.72□□□□□ -1.49
CD44-202ENST00000278385 TPX2Q9ULW0 747 aaKnown RBP5.72□□□□□ -1.49
CD44-202ENST00000278385 ANGEL1Q9UNK9 670 aaKnown RBP5.72□□□□□ -1.49
CD44-202ENST00000278385 FER1L4A9Z1Z3 1794 aa5.72□□□□□ -1.49
CD44-202ENST00000278385 PTPRTO14522 1441 aa5.72□□□□□ -1.49
CD44-202ENST00000278385 PTPRKQ15262 1439 aa5.72□□□□□ -1.49
CD44-202ENST00000278385 PLXNC1O60486 1568 aa5.72□□□□□ -1.49
CD44-202ENST00000278385 INO80Q9ULG1 1556 aaPredicted RBP5.72□□□□□ -1.49
CD44-202ENST00000278385 ESYT3A0FGR9 886 aa5.71□□□□□ -1.5
CD44-202ENST00000278385 FAM170BA6NMN3 283 aa5.71□□□□□ -1.5
CD44-202ENST00000278385 GNAT3A8MTJ3 354 aa5.71□□□□□ -1.5
CD44-202ENST00000278385 FOSL1P15407 271 aa5.71□□□□□ -1.5
CD44-202ENST00000278385 PLCG1P19174 1290 aa5.71□□□□□ -1.5
CD44-202ENST00000278385 MCM4P33991 863 aa5.71□□□□□ -1.5
CD44-202ENST00000278385 CDKN1CP49918 316 aaPredicted RBP5.71□□□□□ -1.5
CD44-202ENST00000278385 EPHB1P54762 984 aa5.71□□□□□ -1.5
CD44-202ENST00000278385 POU5F1Q01860 360 aaKnown RBP5.71□□□□□ -1.5
CD44-202ENST00000278385 PTPN11Q06124 597 aaPredicted RBP5.71□□□□□ -1.5
CD44-202ENST00000278385 RAPGEF1Q13905 1077 aa5.71□□□□□ -1.5
CD44-202ENST00000278385 LRP8Q14114 963 aa5.71□□□□□ -1.5
CD44-202ENST00000278385 ICE2Q659A1 982 aa5.71□□□□□ -1.5
CD44-202ENST00000278385 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.71□□□□□ -1.5
CD44-202ENST00000278385 BNC2Q6ZN30 1099 aaPredicted RBP5.71□□□□□ -1.5
CD44-202ENST00000278385 ANKS3Q6ZW76 656 aa5.71□□□□□ -1.5
CD44-202ENST00000278385 ZNF765Q7L2R6 523 aa5.71□□□□□ -1.5
CD44-202ENST00000278385 ERMP1Q7Z2K6 904 aa5.71□□□□□ -1.5
CD44-202ENST00000278385 LILRB2Q8N423 598 aa5.71□□□□□ -1.5
CD44-202ENST00000278385 TOP6BLQ8N6T0 577 aa5.71□□□□□ -1.5
CD44-202ENST00000278385 SVIPQ8NHG7 77 aa5.71□□□□□ -1.5
CD44-202ENST00000278385 RUNDC1Q96C34 613 aa5.71□□□□□ -1.5
CD44-202ENST00000278385 TRIM55Q9BYV6 548 aa5.71□□□□□ -1.5
CD44-202ENST00000278385 ABCC5O15440 1437 aa5.71□□□□□ -1.5
CD44-202ENST00000278385 TNRQ92752 1358 aa5.7□□□□□ -1.5
CD44-202ENST00000278385 ANKRD30AQ9BXX3 1397 aa5.7□□□□□ -1.5
CD44-202ENST00000278385 SETD1BQ9UPS6 1966 aaKnown RBP5.7□□□□□ -1.5
CD44-202ENST00000278385 CILPO75339 1184 aa5.7□□□□□ -1.5
CD44-202ENST00000278385 F13A1P00488 732 aa5.7□□□□□ -1.5
CD44-202ENST00000278385 ADMP35318 185 aa5.7□□□□□ -1.5
CD44-202ENST00000278385 PDE6BP35913 854 aa5.7□□□□□ -1.5
CD44-202ENST00000278385 RING1Q06587 406 aa5.7□□□□□ -1.5
CD44-202ENST00000278385 APOBRQ0VD83 1088 aa5.7□□□□□ -1.5
CD44-202ENST00000278385 SLC6A19Q695T7 634 aa5.7□□□□□ -1.5
CD44-202ENST00000278385 PPP4R4Q6NUP7 873 aa5.7□□□□□ -1.5
CD44-202ENST00000278385 C16orf86Q6ZW13 317 aa5.7□□□□□ -1.5
CD44-202ENST00000278385 ARMCX6Q7L4S7 300 aa5.7□□□□□ -1.5
CD44-202ENST00000278385 ANKLE2Q86XL3 938 aa5.7□□□□□ -1.5
CD44-202ENST00000278385 JAMLQ86YT9 394 aa5.7□□□□□ -1.5
CD44-202ENST00000278385 KIAA0825Q8IV33 1275 aa5.7□□□□□ -1.5
CD44-202ENST00000278385 PDILTQ8N807 584 aa5.7□□□□□ -1.5
CD44-202ENST00000278385 C1orf131Q8NDD1 294 aaKnown RBP5.7□□□□□ -1.5
CD44-202ENST00000278385 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.7□□□□□ -1.5
CD44-202ENST00000278385 ZNF296Q8WUU4 475 aaPredicted RBP5.7□□□□□ -1.5
CD44-202ENST00000278385 FEZ1Q99689 392 aa5.7□□□□□ -1.5
CD44-202ENST00000278385 SPON2Q9BUD6 331 aa5.7□□□□□ -1.5
CD44-202ENST00000278385 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.7□□□□□ -1.5
CD44-202ENST00000278385 ZFP64Q9NPA5 681 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms