RNA–Protein interactions for RNA: ENST00000277817.10

HERC4-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-201ENST00000277817 SYAP1Q96A49 352 aaPredicted RBP3.42□□□□□ -1.86
HERC4-201ENST00000277817 SLC26A8Q96RN1 970 aa3.42□□□□□ -1.86
HERC4-201ENST00000277817 MPHOSPH6Q99547 160 aaKnown RBP3.42□□□□□ -1.86
HERC4-201ENST00000277817 NPHS2Q9NP85 383 aa3.42□□□□□ -1.86
HERC4-201ENST00000277817 TLR6Q9Y2C9 796 aa3.42□□□□□ -1.86
HERC4-201ENST00000277817 DIS3Q9Y2L1 958 aaKnown RBP3.42□□□□□ -1.86
HERC4-201ENST00000277817 RLBP1P12271 317 aa3.42□□□□□ -1.86
HERC4-201ENST00000277817 HOXB1P14653 301 aaPredicted RBP3.42□□□□□ -1.86
HERC4-201ENST00000277817 CAPN3P20807 821 aa3.42□□□□□ -1.86
HERC4-201ENST00000277817 ADD1P35611 737 aaKnown RBP3.42□□□□□ -1.86
HERC4-201ENST00000277817 CASP2P42575 452 aa3.42□□□□□ -1.86
HERC4-201ENST00000277817 TEFQ10587 303 aa3.42□□□□□ -1.86
HERC4-201ENST00000277817 MPP2Q14168 576 aa3.42□□□□□ -1.86
HERC4-201ENST00000277817 SYDE2Q5VT97 1194 aa3.42□□□□□ -1.86
HERC4-201ENST00000277817 CREB3L3Q68CJ9 461 aa3.42□□□□□ -1.86
HERC4-201ENST00000277817 NELL1Q92832 810 aa3.42□□□□□ -1.86
HERC4-201ENST00000277817 KCNK17Q96T54 332 aa3.42□□□□□ -1.86
HERC4-201ENST00000277817 ANLNQ9NQW6 1124 aa3.42□□□□□ -1.86
HERC4-201ENST00000277817 ASAP1Q9ULH1 1129 aa3.42□□□□□ -1.86
HERC4-201ENST00000277817 PPT2Q9UMR5 302 aa3.42□□□□□ -1.86
HERC4-201ENST00000277817 POLR3KQ9Y2Y1 108 aaPredicted RBP3.42□□□□□ -1.86
HERC4-201ENST00000277817 EYA2O00167 538 aa3.42□□□□□ -1.86
HERC4-201ENST00000277817 MYL3P08590 195 aa3.42□□□□□ -1.86
HERC4-201ENST00000277817 BMP6P22004 513 aa3.42□□□□□ -1.86
HERC4-201ENST00000277817 SLFN5Q08AF3 891 aa3.42□□□□□ -1.86
HERC4-201ENST00000277817 ALDH1L2Q3SY69 923 aa3.42□□□□□ -1.86
HERC4-201ENST00000277817 SPATA31A5Q5VU36 1347 aa3.42□□□□□ -1.86
HERC4-201ENST00000277817 PNMA8AQ86V59 439 aaPredicted RBP3.42□□□□□ -1.86
HERC4-201ENST00000277817 SPATA31A7Q8IWB4 1347 aa3.42□□□□□ -1.86
HERC4-201ENST00000277817 OR10H5Q8NGA6 315 aa3.42□□□□□ -1.86
HERC4-201ENST00000277817 IFT43Q96FT9 208 aa3.42□□□□□ -1.86
HERC4-201ENST00000277817 KIF16BQ96L93 1317 aa3.42□□□□□ -1.86
HERC4-201ENST00000277817 RUSC1Q9BVN2 902 aa3.42□□□□□ -1.86
HERC4-201ENST00000277817 EPN3Q9H201 632 aa3.42□□□□□ -1.86
HERC4-201ENST00000277817 C9orf78Q9NZ63 289 aaPredicted RBP3.42□□□□□ -1.86
HERC4-201ENST00000277817 TSPYL4Q9UJ04 414 aa3.42□□□□□ -1.86
HERC4-201ENST00000277817 MCM8Q9UJA3 840 aa3.42□□□□□ -1.86
HERC4-201ENST00000277817 HDAC5Q9UQL6 1122 aa3.42□□□□□ -1.86
HERC4-201ENST00000277817 DGKBQ9Y6T7 804 aa3.42□□□□□ -1.86
HERC4-201ENST00000277817 COL3A1P02461 1466 aaPredicted RBP3.42□□□□□ -1.86
HERC4-201ENST00000277817 GOLGA6L6A8MZA4 724 aa3.42□□□□□ -1.86
HERC4-201ENST00000277817 RHOBTB3O94955 611 aa3.42□□□□□ -1.86
HERC4-201ENST00000277817 REC8O95072 547 aa3.42□□□□□ -1.86
HERC4-201ENST00000277817 ZRANB2O95218 330 aaKnown RBP eCLIP3.42□□□□□ -1.86
HERC4-201ENST00000277817 MCM4P33991 863 aa3.42□□□□□ -1.86
HERC4-201ENST00000277817 NFKB2Q00653 900 aa3.42□□□□□ -1.86
HERC4-201ENST00000277817 CLCQ05315 142 aa3.42□□□□□ -1.86
HERC4-201ENST00000277817 IFNL2Q8IZJ0 200 aa3.42□□□□□ -1.86
HERC4-201ENST00000277817 CDK19Q9BWU1 502 aa3.42□□□□□ -1.86
HERC4-201ENST00000277817 CSRNP2Q9H175 543 aa3.42□□□□□ -1.86
HERC4-201ENST00000277817 UBAP1LF5GYI3 381 aa3.41□□□□□ -1.86
HERC4-201ENST00000277817 SOX5P35711 763 aa3.41□□□□□ -1.86
HERC4-201ENST00000277817 HALP42357 657 aa3.41□□□□□ -1.86
HERC4-201ENST00000277817 TRAPPC10P48553 1259 aa3.41□□□□□ -1.86
HERC4-201ENST00000277817 FXNQ16595 210 aa3.41□□□□□ -1.86
HERC4-201ENST00000277817 SKOR2Q2VWA4 1001 aaPredicted RBP3.41□□□□□ -1.86
HERC4-201ENST00000277817 NUP88Q99567 741 aaPredicted RBP3.41□□□□□ -1.86
HERC4-201ENST00000277817 AS3MTQ9HBK9 375 aa3.41□□□□□ -1.86
HERC4-201ENST00000277817 FNIP2Q9P278 1114 aa3.41□□□□□ -1.86
HERC4-201ENST00000277817 KDRP35968 1356 aa3.41□□□□□ -1.86
HERC4-201ENST00000277817 LTBP3Q9NS15 1303 aa3.41□□□□□ -1.86
HERC4-201ENST00000277817 FBXO21O94952 628 aa3.41□□□□□ -1.86
HERC4-201ENST00000277817 SH3BP2P78314 561 aa3.41□□□□□ -1.86
HERC4-201ENST00000277817 C1orf141Q5JVX7 400 aa3.41□□□□□ -1.86
HERC4-201ENST00000277817 INTS3Q68E01 1043 aaKnown RBP3.41□□□□□ -1.86
HERC4-201ENST00000277817 CFAP161Q6P656 301 aa3.41□□□□□ -1.86
HERC4-201ENST00000277817 OTOP3Q7RTS5 596 aa3.41□□□□□ -1.86
HERC4-201ENST00000277817 FBXO27Q8NI29 283 aa3.41□□□□□ -1.86
HERC4-201ENST00000277817 GAL3ST3Q96A11 431 aa3.41□□□□□ -1.86
HERC4-201ENST00000277817 TBATAQ96M53 351 aa3.41□□□□□ -1.86
HERC4-201ENST00000277817 PNMA8BQ9ULN7 279 aaPredicted RBP3.41□□□□□ -1.86
HERC4-201ENST00000277817 A0A1W2PP55 124 aa3.41□□□□□ -1.86
HERC4-201ENST00000277817 NFKBIEO00221 500 aa3.41□□□□□ -1.86
HERC4-201ENST00000277817 RBP3P10745 1247 aa3.41□□□□□ -1.86
HERC4-201ENST00000277817 DDIT3P35638 169 aa3.41□□□□□ -1.86
HERC4-201ENST00000277817 TWISTNBQ3B726 338 aaPredicted RBP3.41□□□□□ -1.86
HERC4-201ENST00000277817 KMT5BQ4FZB7 885 aa3.41□□□□□ -1.86
HERC4-201ENST00000277817 DUSP27Q5VZP5 1158 aa3.41□□□□□ -1.86
HERC4-201ENST00000277817 MCTP1Q6DN14 999 aa3.41□□□□□ -1.86
HERC4-201ENST00000277817 TREML1Q86YW5 311 aa3.41□□□□□ -1.86
HERC4-201ENST00000277817 WDR63Q8IWG1 891 aa3.41□□□□□ -1.86
HERC4-201ENST00000277817 ELAC2Q9BQ52 826 aaKnown RBP3.41□□□□□ -1.86
HERC4-201ENST00000277817 ALDH8A1Q9H2A2 487 aaPredicted RBP3.41□□□□□ -1.86
HERC4-201ENST00000277817 SMYD2Q9NRG4 433 aa3.41□□□□□ -1.86
HERC4-201ENST00000277817 DIAPH3Q9NSV4 1193 aa3.41□□□□□ -1.86
HERC4-201ENST00000277817 PHTF1Q9UMS5 762 aa3.41□□□□□ -1.86
HERC4-201ENST00000277817 B2RBV5 119 aa3.4□□□□□ -1.86
HERC4-201ENST00000277817 ARAFP10398 606 aa3.4□□□□□ -1.86
HERC4-201ENST00000277817 WDR45BQ5MNZ6 344 aa3.4□□□□□ -1.86
HERC4-201ENST00000277817 GPR158Q5T848 1215 aa3.4□□□□□ -1.86
HERC4-201ENST00000277817 ZBTB33Q86T24 672 aa3.4□□□□□ -1.86
HERC4-201ENST00000277817 LRRTM3Q86VH5 581 aa3.4□□□□□ -1.86
HERC4-201ENST00000277817 BPHLQ86WA6 291 aaPredicted RBP3.4□□□□□ -1.86
HERC4-201ENST00000277817 CXorf38Q8TB03 319 aa3.4□□□□□ -1.86
HERC4-201ENST00000277817 NKD1Q969G9 470 aa3.4□□□□□ -1.86
HERC4-201ENST00000277817 PGBD4Q96DM1 585 aa3.4□□□□□ -1.86
HERC4-201ENST00000277817 LRCH3Q96II8 777 aa3.4□□□□□ -1.86
HERC4-201ENST00000277817 NECAB3Q96P71 396 aaPredicted RBP3.4□□□□□ -1.86
HERC4-201ENST00000277817 PDLIM7Q9NR12 457 aa3.4□□□□□ -1.86
HERC4-201ENST00000277817 ZNF112Q9UJU3 913 aa3.4□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms