RNA–Protein interactions for RNA: ENST00000273062.6

CTDSP1-201, Transcript of CTD small phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP1, Length 2,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-201ENST00000273062 PLA2G12BQ9BX93 195 aa17.52■□□□□ 0.4
CTDSP1-201ENST00000273062 EBF2Q9HAK2 575 aa17.52■□□□□ 0.4
CTDSP1-201ENST00000273062 COL22A1Q8NFW1 1626 aaPredicted RBP17.52■□□□□ 0.4
CTDSP1-201ENST00000273062 SLIT2O94813 1529 aa17.52■□□□□ 0.4
CTDSP1-201ENST00000273062 SPATA31A1Q5TZJ5 1347 aa17.52■□□□□ 0.39
CTDSP1-201ENST00000273062 IRS4O14654 1257 aaPredicted RBP17.51■□□□□ 0.39
CTDSP1-201ENST00000273062 STX17P56962 302 aa17.51■□□□□ 0.39
CTDSP1-201ENST00000273062 TTC39AQ5SRH9 613 aa17.51■□□□□ 0.39
CTDSP1-201ENST00000273062 KIAA1328Q86T90 577 aa17.51■□□□□ 0.39
CTDSP1-201ENST00000273062 C8orf76Q96K31 380 aa17.51■□□□□ 0.39
CTDSP1-201ENST00000273062 RUFY1Q96T51 708 aa17.51■□□□□ 0.39
CTDSP1-201ENST00000273062 ACTR5Q9H9F9 607 aaPredicted RBP17.51■□□□□ 0.39
CTDSP1-201ENST00000273062 MYO1AQ9UBC5 1043 aa17.51■□□□□ 0.39
CTDSP1-201ENST00000273062 ZMYM6O95789 1325 aa17.51■□□□□ 0.39
CTDSP1-201ENST00000273062 COBLO75128 1261 aa17.51■□□□□ 0.39
CTDSP1-201ENST00000273062 KIF4AO95239 1232 aa17.51■□□□□ 0.39
CTDSP1-201ENST00000273062 LINGO3P0C6S8 592 aa17.51■□□□□ 0.39
CTDSP1-201ENST00000273062 CTSWP56202 376 aa17.51■□□□□ 0.39
CTDSP1-201ENST00000273062 ELF3P78545 371 aaPredicted RBP17.51■□□□□ 0.39
CTDSP1-201ENST00000273062 DDB1Q16531 1140 aa17.51■□□□□ 0.39
CTDSP1-201ENST00000273062 ZMYM1Q5SVZ6 1142 aa17.51■□□□□ 0.39
CTDSP1-201ENST00000273062 MARCH10Q8NA82 808 aaPredicted RBP17.51■□□□□ 0.39
CTDSP1-201ENST00000273062 ENOX1Q8TC92 643 aaKnown RBP17.51■□□□□ 0.39
CTDSP1-201ENST00000273062 C15orf41Q9Y2V0 281 aa17.51■□□□□ 0.39
CTDSP1-201ENST00000273062 A0A1B0GVG6 124 aa17.51■□□□□ 0.39
CTDSP1-201ENST00000273062 PSMD14O00487 310 aa17.51■□□□□ 0.39
CTDSP1-201ENST00000273062 ANP32DO95626 131 aa17.51■□□□□ 0.39
CTDSP1-201ENST00000273062 NR1D1P20393 614 aa17.51■□□□□ 0.39
CTDSP1-201ENST00000273062 DRP2Q13474 957 aa17.51■□□□□ 0.39
CTDSP1-201ENST00000273062 SLC39A14Q15043 492 aa17.51■□□□□ 0.39
CTDSP1-201ENST00000273062 KLHL23Q8NBE8 558 aa17.51■□□□□ 0.39
CTDSP1-201ENST00000273062 OSBP2Q969R2 916 aa17.51■□□□□ 0.39
CTDSP1-201ENST00000273062 BATF3Q9NR55 127 aa17.51■□□□□ 0.39
CTDSP1-201ENST00000273062 PCDHGC5Q9Y5F6 944 aa17.51■□□□□ 0.39
CTDSP1-201ENST00000273062 U3KPZ7 1027 aaPredicted RBP17.51■□□□□ 0.39
CTDSP1-201ENST00000273062 MAP3K13O43283 966 aa17.5■□□□□ 0.39
CTDSP1-201ENST00000273062 COQ9O75208 318 aa17.5■□□□□ 0.39
CTDSP1-201ENST00000273062 ZAP70P43403 619 aa17.5■□□□□ 0.39
CTDSP1-201ENST00000273062 MDM2Q00987 491 aaPredicted RBP17.5■□□□□ 0.39
CTDSP1-201ENST00000273062 XRCC4Q13426 336 aa17.5■□□□□ 0.39
CTDSP1-201ENST00000273062 METTL24Q5JXM2 366 aa17.5■□□□□ 0.39
CTDSP1-201ENST00000273062 C1QTNF12Q5T7M4 302 aa17.5■□□□□ 0.39
CTDSP1-201ENST00000273062 LDHAL6AQ6ZMR3 332 aa17.5■□□□□ 0.39
CTDSP1-201ENST00000273062 DHX32Q7L7V1 743 aaKnown RBP17.5■□□□□ 0.39
CTDSP1-201ENST00000273062 CUL5Q93034 780 aa17.5■□□□□ 0.39
CTDSP1-201ENST00000273062 PICK1Q9NRD5 415 aa17.5■□□□□ 0.39
CTDSP1-201ENST00000273062 HOMER3Q9NSC5 361 aa17.5■□□□□ 0.39
CTDSP1-201ENST00000273062 SMARCAL1Q9NZC9 954 aa17.5■□□□□ 0.39
CTDSP1-201ENST00000273062 WWC3Q9ULE0 1092 aa17.5■□□□□ 0.39
CTDSP1-201ENST00000273062 RTN3O95197 1032 aaPredicted RBP17.5■□□□□ 0.39
CTDSP1-201ENST00000273062 BYSLQ13895 437 aaKnown RBP17.5■□□□□ 0.39
CTDSP1-201ENST00000273062 ABHD10Q9NUJ1 306 aa17.5■□□□□ 0.39
CTDSP1-201ENST00000273062 WNK3Q9BYP7 1800 aa17.49■□□□□ 0.39
CTDSP1-201ENST00000273062 RNF113AO15541 343 aaKnown RBP17.49■□□□□ 0.39
CTDSP1-201ENST00000273062 HSF2BPO75031 334 aa17.49■□□□□ 0.39
CTDSP1-201ENST00000273062 HSPD1P10809 573 aaKnown RBP17.49■□□□□ 0.39
CTDSP1-201ENST00000273062 PYGBP11216 843 aa17.49■□□□□ 0.39
CTDSP1-201ENST00000273062 MDH1P40925 334 aaKnown RBP17.49■□□□□ 0.39
CTDSP1-201ENST00000273062 PRPHP41219 470 aa17.49■□□□□ 0.39
CTDSP1-201ENST00000273062 MATR3P43243 847 aaKnown RBP eCLIP17.49■□□□□ 0.39
CTDSP1-201ENST00000273062 PAPD7Q5XG87 772 aaKnown RBP17.49■□□□□ 0.39
CTDSP1-201ENST00000273062 KLHL10Q6JEL2 608 aa17.49■□□□□ 0.39
CTDSP1-201ENST00000273062 HIBCHQ6NVY1 386 aaPredicted RBP17.49■□□□□ 0.39
CTDSP1-201ENST00000273062 INTS5Q6P9B9 1019 aaKnown RBP17.49■□□□□ 0.39
CTDSP1-201ENST00000273062 ADD3Q9UEY8 706 aaKnown RBP17.49■□□□□ 0.39
CTDSP1-201ENST00000273062 KIF23Q02241 960 aaPredicted RBP17.49■□□□□ 0.39
CTDSP1-201ENST00000273062 PDCD2Q16342 344 aaPredicted RBP17.49■□□□□ 0.39
CTDSP1-201ENST00000273062 CCDC102BQ68D86 513 aa17.49■□□□□ 0.39
CTDSP1-201ENST00000273062 RPUSD2Q8IZ73 545 aaKnown RBP17.49■□□□□ 0.39
CTDSP1-201ENST00000273062 AIFM3Q96NN9 605 aa17.49■□□□□ 0.39
CTDSP1-201ENST00000273062 HELLSQ9NRZ9 838 aa17.49■□□□□ 0.39
CTDSP1-201ENST00000273062 LEMD3Q9Y2U8 911 aa17.49■□□□□ 0.39
CTDSP1-201ENST00000273062 FECHP22830 423 aa17.48■□□□□ 0.39
CTDSP1-201ENST00000273062 HPDP32754 393 aaPredicted RBP17.48■□□□□ 0.39
CTDSP1-201ENST00000273062 CCT6AP40227 531 aaKnown RBP17.48■□□□□ 0.39
CTDSP1-201ENST00000273062 ITPK1Q13572 414 aa17.48■□□□□ 0.39
CTDSP1-201ENST00000273062 GNPTABQ3T906 1256 aa17.48■□□□□ 0.39
CTDSP1-201ENST00000273062 HELBQ8NG08 1087 aaPredicted RBP17.48■□□□□ 0.39
CTDSP1-201ENST00000273062 KCNH3Q9ULD8 1083 aa17.48■□□□□ 0.39
CTDSP1-201ENST00000273062 SPDYE3A6NKU9 549 aa17.48■□□□□ 0.39
CTDSP1-201ENST00000273062 SNAP23O00161 211 aa17.48■□□□□ 0.39
CTDSP1-201ENST00000273062 FOXP2O15409 715 aa17.48■□□□□ 0.39
CTDSP1-201ENST00000273062 KCNQ2O43526 872 aa17.48■□□□□ 0.39
CTDSP1-201ENST00000273062 RESP18Q5W5W9 173 aa17.48■□□□□ 0.39
CTDSP1-201ENST00000273062 STK11IPQ8N1F8 1099 aa17.48■□□□□ 0.39
CTDSP1-201ENST00000273062 CNNM1Q9NRU3 951 aa17.48■□□□□ 0.39
CTDSP1-201ENST00000273062 IL6STP40189 918 aaPredicted RBP17.47■□□□□ 0.39
CTDSP1-201ENST00000273062 CRKLP46109 303 aaKnown RBP17.47■□□□□ 0.39
CTDSP1-201ENST00000273062 KCNQ4P56696 695 aa17.47■□□□□ 0.39
CTDSP1-201ENST00000273062 LAMB3Q13751 1172 aa17.47■□□□□ 0.39
CTDSP1-201ENST00000273062 TMTC1Q8IUR5 882 aa17.47■□□□□ 0.39
CTDSP1-201ENST00000273062 CNGA4Q8IV77 575 aa17.47■□□□□ 0.39
CTDSP1-201ENST00000273062 EZH1Q92800 747 aaPredicted RBP17.47■□□□□ 0.39
CTDSP1-201ENST00000273062 FAM167BQ9BTA0 163 aa17.47■□□□□ 0.39
CTDSP1-201ENST00000273062 NUP98P52948 1817 aa17.47■□□□□ 0.39
CTDSP1-201ENST00000273062 A6NNZ2 444 aa17.47■□□□□ 0.39
CTDSP1-201ENST00000273062 FAM153BP0C7A2 387 aa17.47■□□□□ 0.39
CTDSP1-201ENST00000273062 ABL2P42684 1182 aa17.47■□□□□ 0.39
CTDSP1-201ENST00000273062 MCAMP43121 646 aa17.47■□□□□ 0.39
CTDSP1-201ENST00000273062 EXOSC10Q01780 885 aaKnown RBP17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms