RNA–Protein interactions for RNA: ENST00000272091.7

SDE2-201, Transcript of SDE2 telomere maintenance homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDE2, Length 3,975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDE2-201ENST00000272091 TMX2Q9Y320 296 aa13.84□□□□□ -0.19
SDE2-201ENST00000272091 MYH7BA7E2Y1 1941 aa13.84□□□□□ -0.19
SDE2-201ENST00000272091 RAD21O60216 631 aa13.84□□□□□ -0.19
SDE2-201ENST00000272091 QRICH1Q2TAL8 776 aa13.84□□□□□ -0.19
SDE2-201ENST00000272091 CCDC12Q8WUD4 166 aaPredicted RBP13.84□□□□□ -0.19
SDE2-201ENST00000272091 PDLIM2Q96JY6 352 aa13.84□□□□□ -0.19
SDE2-201ENST00000272091 C6orf50Q9HD87 102 aa13.84□□□□□ -0.19
SDE2-201ENST00000272091 BIN2Q9UBW5 565 aaPredicted RBP13.84□□□□□ -0.19
SDE2-201ENST00000272091 SYNPO2Q9UMS6 1093 aa13.84□□□□□ -0.19
SDE2-201ENST00000272091 CCDC194A0A1B0GVG4 234 aa13.84□□□□□ -0.19
SDE2-201ENST00000272091 CLK2P49760 499 aaKnown RBP13.84□□□□□ -0.19
SDE2-201ENST00000272091 SNAP25P60880 206 aa13.84□□□□□ -0.19
SDE2-201ENST00000272091 MDM2Q00987 491 aaPredicted RBP13.84□□□□□ -0.19
SDE2-201ENST00000272091 EPSTI1Q96J88 318 aa13.84□□□□□ -0.19
SDE2-201ENST00000272091 TMEM60Q9H2L4 133 aa13.84□□□□□ -0.19
SDE2-201ENST00000272091 SMCHD1A6NHR9 2005 aa13.84□□□□□ -0.19
SDE2-201ENST00000272091 FOXN1O15353 648 aa13.83□□□□□ -0.19
SDE2-201ENST00000272091 PPP1R18Q6NYC8 613 aa13.83□□□□□ -0.19
SDE2-201ENST00000272091 BTNL9Q6UXG8 535 aa13.83□□□□□ -0.19
SDE2-201ENST00000272091 DNAJC25Q9H1X3 360 aa13.83□□□□□ -0.19
SDE2-201ENST00000272091 BMP15O95972 392 aa13.83□□□□□ -0.2
SDE2-201ENST00000272091 LMNB1P20700 586 aa13.83□□□□□ -0.2
SDE2-201ENST00000272091 CDC37Q16543 378 aaPredicted RBP13.83□□□□□ -0.2
SDE2-201ENST00000272091 KRBA2Q6ZNG9 492 aa13.83□□□□□ -0.2
SDE2-201ENST00000272091 SPICE1Q8N0Z3 855 aa13.83□□□□□ -0.2
SDE2-201ENST00000272091 CBX8Q9HC52 389 aa13.83□□□□□ -0.2
SDE2-201ENST00000272091 KIAA1468Q9P260 1216 aa13.83□□□□□ -0.2
SDE2-201ENST00000272091 PHIPQ8WWQ0 1821 aa13.83□□□□□ -0.2
SDE2-201ENST00000272091 YBX3P16989 372 aaKnown RBP eCLIP13.83□□□□□ -0.29e-9■■■□□ 15.2
SDE2-201ENST00000272091 TAL1P17542 331 aaPredicted RBP13.83□□□□□ -0.2
SDE2-201ENST00000272091 FERMT2Q96AC1 680 aa13.83□□□□□ -0.2
SDE2-201ENST00000272091 RIC8AQ9NPQ8 531 aa13.83□□□□□ -0.2
SDE2-201ENST00000272091 ACTN4O43707 911 aaKnown RBP13.82□□□□□ -0.2
SDE2-201ENST00000272091 GNA11P29992 359 aa13.82□□□□□ -0.2
SDE2-201ENST00000272091 TNNI2P48788 182 aa13.82□□□□□ -0.2
SDE2-201ENST00000272091 ADCY7P51828 1080 aa13.82□□□□□ -0.2
SDE2-201ENST00000272091 UVSSAQ2YD98 709 aa13.82□□□□□ -0.2
SDE2-201ENST00000272091 JAKMIP3Q5VZ66 844 aa13.82□□□□□ -0.2
SDE2-201ENST00000272091 SASS6Q6UVJ0 657 aa13.82□□□□□ -0.2
SDE2-201ENST00000272091 KRT25Q7Z3Z0 450 aa13.82□□□□□ -0.2
SDE2-201ENST00000272091 SYMPKQ92797 1274 aaKnown RBP13.82□□□□□ -0.2
SDE2-201ENST00000272091 SDF4Q9BRK5 362 aa13.82□□□□□ -0.2
SDE2-201ENST00000272091 GPRC5DQ9NZD1 345 aa13.82□□□□□ -0.2
SDE2-201ENST00000272091 SSC5DA1L4H1 1573 aa13.82□□□□□ -0.2
SDE2-201ENST00000272091 BMP3P12645 472 aa13.82□□□□□ -0.2
SDE2-201ENST00000272091 HIRAP54198 1017 aaPredicted RBP13.82□□□□□ -0.2
SDE2-201ENST00000272091 UBE2SQ16763 222 aa13.82□□□□□ -0.2
SDE2-201ENST00000272091 FAM200AQ8TCP9 573 aa13.82□□□□□ -0.2
SDE2-201ENST00000272091 TMEM232C9JQI7 657 aa13.82□□□□□ -0.2
SDE2-201ENST00000272091 PNOCQ13519 176 aa13.82□□□□□ -0.2
SDE2-201ENST00000272091 LUZP1Q86V48 1076 aa13.82□□□□□ -0.2
SDE2-201ENST00000272091 REXO1Q8N1G1 1221 aaKnown RBP13.82□□□□□ -0.2
SDE2-201ENST00000272091 SYT17Q9BSW7 474 aa13.82□□□□□ -0.2
SDE2-201ENST00000272091 PAPPA2Q9BXP8 1791 aa13.82□□□□□ -0.2
SDE2-201ENST00000272091 PARP14Q460N5 1801 aa13.82□□□□□ -0.2
SDE2-201ENST00000272091 VWA3AA6NCI4 1184 aa13.81□□□□□ -0.2
SDE2-201ENST00000272091 CCDC173Q0VFZ6 552 aa13.81□□□□□ -0.2
SDE2-201ENST00000272091 NONOQ15233 471 aaKnown RBP eCLIP13.81□□□□□ -0.2
SDE2-201ENST00000272091 DEFB129Q9H1M3 183 aa13.81□□□□□ -0.2
SDE2-201ENST00000272091 ARHGEF10LQ9HCE6 1279 aa13.81□□□□□ -0.2
SDE2-201ENST00000272091 POLR2DO15514 142 aaKnown RBP13.81□□□□□ -0.2
SDE2-201ENST00000272091 NBPF12Q5TAG4 269 aaPredicted RBP13.81□□□□□ -0.2
SDE2-201ENST00000272091 SYDE2Q5VT97 1194 aa13.81□□□□□ -0.2
SDE2-201ENST00000272091 GPC2Q8N158 579 aa13.81□□□□□ -0.2
SDE2-201ENST00000272091 TBCKQ8TEA7 893 aa13.81□□□□□ -0.2
SDE2-201ENST00000272091 SERTAD1Q9UHV2 236 aa13.81□□□□□ -0.2
SDE2-201ENST00000272091 TUBE1Q9UJT0 475 aa13.81□□□□□ -0.2
SDE2-201ENST00000272091 POLR2AP24928 1970 aaKnown RBP13.81□□□□□ -0.2
SDE2-201ENST00000272091 PRR29P0C7W0 189 aa13.81□□□□□ -0.2
SDE2-201ENST00000272091 EPS15P42566 896 aa13.81□□□□□ -0.2
SDE2-201ENST00000272091 TNFAIP1Q13829 316 aa13.81□□□□□ -0.2
SDE2-201ENST00000272091 IQCB1Q15051 598 aa13.81□□□□□ -0.2
SDE2-201ENST00000272091 P2RX7Q99572 595 aaKnown RBP13.81□□□□□ -0.2
SDE2-201ENST00000272091 STX1AQ16623 288 aa13.81□□□□□ -0.2
SDE2-201ENST00000272091 FAM83BQ5T0W9 1011 aa13.81□□□□□ -0.2
SDE2-201ENST00000272091 FAM13BQ9NYF5 915 aa13.81□□□□□ -0.2
SDE2-201ENST00000272091 ANGEL2Q5VTE6 544 aaKnown RBP13.8□□□□□ -0.2
SDE2-201ENST00000272091 ARL6IP4Q66PJ3 421 aaKnown RBP13.8□□□□□ -0.2
SDE2-201ENST00000272091 ELOA2Q8IYF1 753 aaPredicted RBP13.8□□□□□ -0.2
SDE2-201ENST00000272091 OPLAHO14841 1288 aa13.8□□□□□ -0.2
SDE2-201ENST00000272091 GRAMD1CQ8IYS0 662 aa13.8□□□□□ -0.2
SDE2-201ENST00000272091 VCPKMTQ9H867 229 aa13.8□□□□□ -0.2
SDE2-201ENST00000272091 USP25Q9UHP3 1055 aa13.8□□□□□ -0.2
SDE2-201ENST00000272091 PRR12Q9ULL5 1215 aa13.8□□□□□ -0.2
SDE2-201ENST00000272091 DPCR1Q3MIW9 517 aa13.8□□□□□ -0.2
SDE2-201ENST00000272091 PDILTQ8N807 584 aa13.8□□□□□ -0.2
SDE2-201ENST00000272091 E2F4Q16254 413 aa13.79□□□□□ -0.2
SDE2-201ENST00000272091 PRAMEF18Q5VWM3 479 aa13.79□□□□□ -0.2
SDE2-201ENST00000272091 NEK8Q86SG6 692 aa13.79□□□□□ -0.2
SDE2-201ENST00000272091 FZD1Q9UP38 647 aa13.79□□□□□ -0.2
SDE2-201ENST00000272091 DGKZQ13574 1117 aa13.79□□□□□ -0.2
SDE2-201ENST00000272091 ZYXQ15942 572 aaKnown RBP13.79□□□□□ -0.2
SDE2-201ENST00000272091 LETM2Q2VYF4 491 aa13.79□□□□□ -0.2
SDE2-201ENST00000272091 DHX40Q8IX18 779 aaKnown RBP13.79□□□□□ -0.2
SDE2-201ENST00000272091 CNNM3Q8NE01 707 aa13.79□□□□□ -0.2
SDE2-201ENST00000272091 GOPCQ9HD26 462 aa13.79□□□□□ -0.2
SDE2-201ENST00000272091 PCDHA1Q9Y5I3 950 aa13.79□□□□□ -0.2
SDE2-201ENST00000272091 BIN1O00499 593 aa13.78□□□□□ -0.2
SDE2-201ENST00000272091 CCNT1O60563 726 aaKnown RBP13.78□□□□□ -0.2
SDE2-201ENST00000272091 ASNSP08243 561 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms