RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 ARPP21Q9UBL0 812 aaPredicted RBP10.75□□□□□ -0.69
TPM3-201ENST00000271850 PHF24Q9UPV7 400 aa10.75□□□□□ -0.69
TPM3-201ENST00000271850 TACC3Q9Y6A5 838 aa10.75□□□□□ -0.69
TPM3-201ENST00000271850 DNAJC25-GNG10A0A024R161 153 aa10.74□□□□□ -0.69
TPM3-201ENST00000271850 MYADML2A6NDP7 307 aa10.74□□□□□ -0.69
TPM3-201ENST00000271850 DLL1O00548 723 aa10.74□□□□□ -0.69
TPM3-201ENST00000271850 GPAA1O43292 621 aa10.74□□□□□ -0.69
TPM3-201ENST00000271850 PRDM1O75626 825 aa10.74□□□□□ -0.69
TPM3-201ENST00000271850 SLC25A27O95847 323 aa10.74□□□□□ -0.69
TPM3-201ENST00000271850 SNAI1O95863 264 aaPredicted RBP10.74□□□□□ -0.69
TPM3-201ENST00000271850 PGK1P00558 417 aa10.74□□□□□ -0.69
TPM3-201ENST00000271850 FCER1AP12319 257 aa10.74□□□□□ -0.69
TPM3-201ENST00000271850 STAT3P40763 770 aa10.74□□□□□ -0.69
TPM3-201ENST00000271850 C1orf53Q5VUE5 145 aa10.74□□□□□ -0.69
TPM3-201ENST00000271850 CCSAPQ6IQ19 270 aaPredicted RBP10.74□□□□□ -0.69
TPM3-201ENST00000271850 PI4K2BQ8TCG2 481 aa10.74□□□□□ -0.69
TPM3-201ENST00000271850 APPBP2Q92624 585 aa10.74□□□□□ -0.69
TPM3-201ENST00000271850 BADQ92934 168 aa10.74□□□□□ -0.69
TPM3-201ENST00000271850 TINF2Q9BSI4 451 aa10.74□□□□□ -0.69
TPM3-201ENST00000271850 SH2D4AQ9H788 454 aa10.74□□□□□ -0.69
TPM3-201ENST00000271850 KBTBD13C9JR72 458 aa10.73□□□□□ -0.69
TPM3-201ENST00000271850 F5H6K3 240 aa10.73□□□□□ -0.69
TPM3-201ENST00000271850 KLRC3Q07444 240 aa10.73□□□□□ -0.69
TPM3-201ENST00000271850 GIMAP6Q6P9H5 292 aa10.73□□□□□ -0.69
TPM3-201ENST00000271850 RASGRP2Q7LDG7 609 aa10.73□□□□□ -0.69
TPM3-201ENST00000271850 ARRDC4Q8NCT1 418 aa10.73□□□□□ -0.69
TPM3-201ENST00000271850 FAM161BQ96MY7 647 aa10.73□□□□□ -0.69
TPM3-201ENST00000271850 SLF1Q9BQI6 1058 aa10.73□□□□□ -0.69
TPM3-201ENST00000271850 XPNPEP3Q9NQH7 507 aa10.73□□□□□ -0.69
TPM3-201ENST00000271850 NYAP2Q9P242 653 aa10.73□□□□□ -0.69
TPM3-201ENST00000271850 DIS3Q9Y2L1 958 aaKnown RBP10.73□□□□□ -0.69
TPM3-201ENST00000271850 PCDHB15Q9Y5E8 787 aa10.73□□□□□ -0.69
TPM3-201ENST00000271850 MYH4Q9Y623 1939 aa10.73□□□□□ -0.69
TPM3-201ENST00000271850 SALL3Q9BXA9 1300 aa10.73□□□□□ -0.69
TPM3-201ENST00000271850 PLIN4Q96Q06 1357 aa10.73□□□□□ -0.69
TPM3-201ENST00000271850 MCM3APO60318 1980 aa10.72□□□□□ -0.69
TPM3-201ENST00000271850 A0A1W2PQ45 241 aaPredicted RBP10.72□□□□□ -0.69
TPM3-201ENST00000271850 A0A1W2PQY0 241 aa10.72□□□□□ -0.69
TPM3-201ENST00000271850 MINDY4BA8MYZ0 360 aa10.72□□□□□ -0.69
TPM3-201ENST00000271850 RNF113AO15541 343 aaKnown RBP10.72□□□□□ -0.69
TPM3-201ENST00000271850 RGS20O76081 388 aa10.72□□□□□ -0.69
TPM3-201ENST00000271850 PTGS1P23219 599 aa10.72□□□□□ -0.69
TPM3-201ENST00000271850 TLE2Q04725 743 aa10.72□□□□□ -0.69
TPM3-201ENST00000271850 FAM109BQ6ICB4 259 aaPredicted RBP10.72□□□□□ -0.69
TPM3-201ENST00000271850 SNRNP48Q6IEG0 339 aaKnown RBP10.72□□□□□ -0.69
TPM3-201ENST00000271850 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.72□□□□□ -0.69
TPM3-201ENST00000271850 KLHDC9Q8NEP7 349 aa10.72□□□□□ -0.69
TPM3-201ENST00000271850 CEP95Q96GE4 821 aa10.72□□□□□ -0.69
TPM3-201ENST00000271850 KATNBL1Q9H079 304 aa10.72□□□□□ -0.69
TPM3-201ENST00000271850 TTYH1Q9H313 450 aaPredicted RBP10.72□□□□□ -0.69
TPM3-201ENST00000271850 GOPCQ9HD26 462 aa10.72□□□□□ -0.69
TPM3-201ENST00000271850 PRDM5Q9NQX1 630 aaPredicted RBP10.72□□□□□ -0.69
TPM3-201ENST00000271850 NRBP1Q9UHY1 535 aa10.72□□□□□ -0.69
TPM3-201ENST00000271850 DDX49Q9Y6V7 483 aaKnown RBP10.72□□□□□ -0.69
TPM3-201ENST00000271850 SYNRGQ9UMZ2 1314 aa10.72□□□□□ -0.69
TPM3-201ENST00000271850 CHD9Q3L8U1 2897 aa10.71□□□□□ -0.69
TPM3-201ENST00000271850 LRRC37A2A6NM11 1700 aa10.71□□□□□ -0.69
TPM3-201ENST00000271850 ASTN1O14525 1302 aa10.71□□□□□ -0.69
TPM3-201ENST00000271850 ATP2A1O14983 1001 aa10.71□□□□□ -0.69
TPM3-201ENST00000271850 ZNF536O15090 1300 aa10.71□□□□□ -0.69
TPM3-201ENST00000271850 CTAGE5O15320 804 aa10.71□□□□□ -0.69
TPM3-201ENST00000271850 RAD21O60216 631 aa10.71□□□□□ -0.69
TPM3-201ENST00000271850 LCTP09848 1927 aa10.71□□□□□ -0.69
TPM3-201ENST00000271850 ZSCAN25Q6NSZ9 544 aa10.71□□□□□ -0.69
TPM3-201ENST00000271850 MAMDC4Q6UXC1 1216 aa10.71□□□□□ -0.69
TPM3-201ENST00000271850 IFNL3Q8IZI9 196 aa10.71□□□□□ -0.69
TPM3-201ENST00000271850 LRRC47Q8N1G4 583 aaKnown RBP10.71□□□□□ -0.69
TPM3-201ENST00000271850 MKL1Q969V6 931 aa10.71□□□□□ -0.69
TPM3-201ENST00000271850 TEX13BQ9BXU2 312 aa10.71□□□□□ -0.69
TPM3-201ENST00000271850 SLC38A10Q9HBR0 1119 aa10.71□□□□□ -0.69
TPM3-201ENST00000271850 RAVER2Q9HCJ3 691 aaKnown RBP10.71□□□□□ -0.69
TPM3-201ENST00000271850 INCENPQ9NQS7 918 aa10.71□□□□□ -0.69
TPM3-201ENST00000271850 SLC5A4Q9NY91 659 aa10.71□□□□□ -0.69
TPM3-201ENST00000271850 MTMR4Q9NYA4 1195 aa10.71□□□□□ -0.69
TPM3-201ENST00000271850 CLIP2Q9UDT6 1046 aa10.71□□□□□ -0.69
TPM3-201ENST00000271850 SYNGAP1Q96PV0 1343 aa10.7□□□□□ -0.7
TPM3-201ENST00000271850 RARBP10826 455 aa10.7□□□□□ -0.7
TPM3-201ENST00000271850 AKR1A1P14550 325 aa10.7□□□□□ -0.7
TPM3-201ENST00000271850 FOXK1P85037 733 aa10.7□□□□□ -0.7
TPM3-201ENST00000271850 KCTD2Q14681 263 aa10.7□□□□□ -0.7
TPM3-201ENST00000271850 CCDC129Q6ZRS4 1044 aa10.7□□□□□ -0.7
TPM3-201ENST00000271850 PLPP6Q8IY26 295 aa10.7□□□□□ -0.7
TPM3-201ENST00000271850 AMOTL1Q8IY63 956 aa10.7□□□□□ -0.7
TPM3-201ENST00000271850 KCNK17Q96T54 332 aa10.7□□□□□ -0.7
TPM3-201ENST00000271850 LBHD1Q9BQE6 289 aaPredicted RBP10.7□□□□□ -0.7
TPM3-201ENST00000271850 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.7□□□□□ -0.7
TPM3-201ENST00000271850 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.69□□□□□ -0.7
TPM3-201ENST00000271850 PATL2C9JE40 543 aaKnown RBP10.69□□□□□ -0.7
TPM3-201ENST00000271850 KIAA0355O15063 1070 aa10.69□□□□□ -0.7
TPM3-201ENST00000271850 PQBP1O60828 265 aaKnown RBP10.69□□□□□ -0.7
TPM3-201ENST00000271850 CLTBP09497 229 aa10.69□□□□□ -0.7
TPM3-201ENST00000271850 ACLYP53396 1101 aa10.69□□□□□ -0.7
TPM3-201ENST00000271850 FAAP100Q0VG06 881 aa10.69□□□□□ -0.7
TPM3-201ENST00000271850 ZMYM1Q5SVZ6 1142 aa10.69□□□□□ -0.7
TPM3-201ENST00000271850 ANKRD33Q7Z3H0 272 aa10.69□□□□□ -0.7
TPM3-201ENST00000271850 CPXCR1Q8N123 301 aa10.69□□□□□ -0.7
TPM3-201ENST00000271850 PRPF38AQ8NAV1 312 aaKnown RBP10.69□□□□□ -0.7
TPM3-201ENST00000271850 GMCL1P1Q8NEA9 526 aa10.69□□□□□ -0.7
TPM3-201ENST00000271850 NEDD1Q8NHV4 660 aa10.69□□□□□ -0.7
TPM3-201ENST00000271850 KIFC2Q96AC6 838 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms