RNA–Protein interactions for RNA: ENST00000269347.10

RAB40B-201, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 2,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-201ENST00000269347 LRRC8AQ8IWT6 810 aa26.29■■□□□ 1.8
RAB40B-201ENST00000269347 PLIN2Q99541 437 aa26.29■■□□□ 1.8
RAB40B-201ENST00000269347 DHX36Q9H2U1 1008 aaKnown RBP26.29■■□□□ 1.8
RAB40B-201ENST00000269347 COBLO75128 1261 aa26.28■■□□□ 1.8
RAB40B-201ENST00000269347 GMLQ99445 158 aa26.28■■□□□ 1.8
RAB40B-201ENST00000269347 C6orf50Q9HD87 102 aa26.28■■□□□ 1.8
RAB40B-201ENST00000269347 R3HCC1Q9Y3T6 440 aaKnown RBP26.28■■□□□ 1.8
RAB40B-201ENST00000269347 SMCHD1A6NHR9 2005 aa26.28■■□□□ 1.8
RAB40B-201ENST00000269347 KIF13BQ9NQT8 1826 aa26.28■■□□□ 1.8
RAB40B-201ENST00000269347 ARFGEF1Q9Y6D6 1849 aa26.28■■□□□ 1.8
RAB40B-201ENST00000269347 TMEM232C9JQI7 657 aa26.27■■□□□ 1.8
RAB40B-201ENST00000269347 UBE2SQ16763 222 aa26.27■■□□□ 1.8
RAB40B-201ENST00000269347 CCDC96Q2M329 555 aa26.27■■□□□ 1.8
RAB40B-201ENST00000269347 MYH7BA7E2Y1 1941 aa26.27■■□□□ 1.8
RAB40B-201ENST00000269347 RAD21O60216 631 aa26.27■■□□□ 1.8
RAB40B-201ENST00000269347 CCNT1O60563 726 aaKnown RBP26.27■■□□□ 1.8
RAB40B-201ENST00000269347 TAL1P17542 331 aaPredicted RBP26.27■■□□□ 1.8
RAB40B-201ENST00000269347 BAG6P46379 1132 aa26.27■■□□□ 1.8
RAB40B-201ENST00000269347 NONOQ15233 471 aaKnown RBP eCLIP26.27■■□□□ 1.8
RAB40B-201ENST00000269347 CCDC93Q567U6 631 aa26.27■■□□□ 1.8
RAB40B-201ENST00000269347 CC2D2BQ6DHV5 1058 aa26.27■■□□□ 1.8
RAB40B-201ENST00000269347 KANK3Q6NY19 840 aa26.27■■□□□ 1.8
RAB40B-201ENST00000269347 NUP88Q99567 741 aaPredicted RBP26.27■■□□□ 1.8
RAB40B-201ENST00000269347 TCP10L2B9ZVM9 353 aa26.26■■□□□ 1.79
RAB40B-201ENST00000269347 TPM3P06753 285 aa26.26■■□□□ 1.79
RAB40B-201ENST00000269347 LONP1P36776 959 aaKnown RBP26.26■■□□□ 1.79
RAB40B-201ENST00000269347 HOOK1Q9UJC3 728 aaKnown RBP26.26■■□□□ 1.79
RAB40B-201ENST00000269347 SNAP25P60880 206 aa26.26■■□□□ 1.79
RAB40B-201ENST00000269347 RSBN1LQ6PCB5 846 aaPredicted RBP26.26■■□□□ 1.79
RAB40B-201ENST00000269347 POTEDQ86YR6 584 aa26.26■■□□□ 1.79
RAB40B-201ENST00000269347 MTMR8Q96EF0 704 aa26.26■■□□□ 1.79
RAB40B-201ENST00000269347 CCDC17Q96LX7 622 aa26.26■■□□□ 1.79
RAB40B-201ENST00000269347 SAMSN1Q9NSI8 373 aaKnown RBP26.26■■□□□ 1.79
RAB40B-201ENST00000269347 ESYT2A0FGR8 921 aa26.25■■□□□ 1.79
RAB40B-201ENST00000269347 CCZ1BP86790 482 aa26.25■■□□□ 1.79
RAB40B-201ENST00000269347 CCZ1P86791 482 aaPredicted RBP26.25■■□□□ 1.79
RAB40B-201ENST00000269347 DTHD1Q6ZMT9 781 aa26.25■■□□□ 1.79
RAB40B-201ENST00000269347 KRT25Q7Z3Z0 450 aa26.25■■□□□ 1.79
RAB40B-201ENST00000269347 TMC6Q7Z403 805 aa26.25■■□□□ 1.79
RAB40B-201ENST00000269347 REXO1Q8N1G1 1221 aaKnown RBP26.25■■□□□ 1.79
RAB40B-201ENST00000269347 SUPT20HQ8NEM7 779 aa26.25■■□□□ 1.79
RAB40B-201ENST00000269347 FRMD4AQ9P2Q2 1039 aaPredicted RBP26.25■■□□□ 1.79
RAB40B-201ENST00000269347 ATRNL1Q5VV63 1379 aa26.25■■□□□ 1.79
RAB40B-201ENST00000269347 SHTN1A0MZ66 631 aa26.24■■□□□ 1.79
RAB40B-201ENST00000269347 NPM3O75607 178 aaKnown RBP26.24■■□□□ 1.79
RAB40B-201ENST00000269347 ZBTB7AO95365 584 aa26.24■■□□□ 1.79
RAB40B-201ENST00000269347 GNA11P29992 359 aa26.24■■□□□ 1.79
RAB40B-201ENST00000269347 SOGA3Q5TF21 947 aa26.24■■□□□ 1.79
RAB40B-201ENST00000269347 ARMCX5Q6P1M9 558 aa26.24■■□□□ 1.79
RAB40B-201ENST00000269347 LARGE2Q8N3Y3 721 aa26.24■■□□□ 1.79
RAB40B-201ENST00000269347 MKL1Q969V6 931 aa26.24■■□□□ 1.79
RAB40B-201ENST00000269347 SCAF8Q9UPN6 1271 aaKnown RBP26.24■■□□□ 1.79
RAB40B-201ENST00000269347 NFE2L3Q9Y4A8 694 aa26.24■■□□□ 1.79
RAB40B-201ENST00000269347 PNMA6FA0A0J9YX94 578 aa26.24■■□□□ 1.79
RAB40B-201ENST00000269347 SPDYE2BA6NHP3 402 aa26.24■■□□□ 1.79
RAB40B-201ENST00000269347 SLC37A4O43826 429 aa26.24■■□□□ 1.79
RAB40B-201ENST00000269347 SPDYE6P0CI01 402 aa26.24■■□□□ 1.79
RAB40B-201ENST00000269347 ZNF18P17022 549 aa26.24■■□□□ 1.79
RAB40B-201ENST00000269347 STX17P56962 302 aa26.24■■□□□ 1.79
RAB40B-201ENST00000269347 NEK8Q86SG6 692 aa26.24■■□□□ 1.79
RAB40B-201ENST00000269347 MLKLQ8NB16 471 aa26.24■■□□□ 1.79
RAB40B-201ENST00000269347 CCDC12Q8WUD4 166 aaPredicted RBP26.24■■□□□ 1.79
RAB40B-201ENST00000269347 PSMD1Q99460 953 aa26.24■■□□□ 1.79
RAB40B-201ENST00000269347 A0A1W2PRG0 241 aa26.23■■□□□ 1.79
RAB40B-201ENST00000269347 PPP1R3GB7ZBB8 358 aa26.23■■□□□ 1.79
RAB40B-201ENST00000269347 TDP2O95551 362 aa26.23■■□□□ 1.79
RAB40B-201ENST00000269347 TPM2P07951 284 aa26.23■■□□□ 1.79
RAB40B-201ENST00000269347 VIL1P09327 827 aaKnown RBP26.23■■□□□ 1.79
RAB40B-201ENST00000269347 TRIML1Q8N9V2 468 aa26.23■■□□□ 1.79
RAB40B-201ENST00000269347 IQUBQ8NA54 791 aa26.23■■□□□ 1.79
RAB40B-201ENST00000269347 DISC1Q9NRI5 854 aa26.23■■□□□ 1.79
RAB40B-201ENST00000269347 NYAP2Q9P242 653 aa26.23■■□□□ 1.79
RAB40B-201ENST00000269347 CNTNAP1P78357 1384 aa26.22■■□□□ 1.79
RAB40B-201ENST00000269347 GH2P01242 217 aa26.22■■□□□ 1.79
RAB40B-201ENST00000269347 GOLGA8FQ08AF8 430 aa26.22■■□□□ 1.79
RAB40B-201ENST00000269347 GOLGA8DPQ0D2H9 430 aa26.22■■□□□ 1.79
RAB40B-201ENST00000269347 KLHL10Q6JEL2 608 aa26.22■■□□□ 1.79
RAB40B-201ENST00000269347 GJA10Q969M2 543 aa26.22■■□□□ 1.79
RAB40B-201ENST00000269347 CSRNP1Q96S65 589 aa26.22■■□□□ 1.79
RAB40B-201ENST00000269347 USP27XA6NNY8 438 aa26.22■■□□□ 1.79
RAB40B-201ENST00000269347 CLK2P49760 499 aaKnown RBP26.22■■□□□ 1.79
RAB40B-201ENST00000269347 ADCY7P51828 1080 aa26.22■■□□□ 1.79
RAB40B-201ENST00000269347 ICA1Q05084 483 aa26.22■■□□□ 1.79
RAB40B-201ENST00000269347 SLFN13Q68D06 897 aa26.22■■□□□ 1.79
RAB40B-201ENST00000269347 ENOX1Q8TC92 643 aaKnown RBP26.22■■□□□ 1.79
RAB40B-201ENST00000269347 KANSL2Q9H9L4 492 aa26.22■■□□□ 1.79
RAB40B-201ENST00000269347 ENTPD3O75355 529 aa26.21■■□□□ 1.79
RAB40B-201ENST00000269347 UBASH3AP57075 661 aa26.21■■□□□ 1.79
RAB40B-201ENST00000269347 ABCB5Q2M3G0 1257 aa26.21■■□□□ 1.79
RAB40B-201ENST00000269347 KIAA1755Q5JYT7 1200 aa26.21■■□□□ 1.79
RAB40B-201ENST00000269347 RTKN2Q8IZC4 609 aa26.21■■□□□ 1.79
RAB40B-201ENST00000269347 FAM177A1Q8N128 213 aaPredicted RBP26.21■■□□□ 1.79
RAB40B-201ENST00000269347 P2RX7Q99572 595 aaKnown RBP26.21■■□□□ 1.79
RAB40B-201ENST00000269347 MMTAG2Q9BU76 263 aaKnown RBP26.21■■□□□ 1.79
RAB40B-201ENST00000269347 ZBTB5O15062 677 aa26.2■■□□□ 1.79
RAB40B-201ENST00000269347 NEMFO60524 1076 aa26.2■■□□□ 1.79
RAB40B-201ENST00000269347 OR52Z1P0C646 297 aa26.2■■□□□ 1.79
RAB40B-201ENST00000269347 SF3B2Q13435 895 aaKnown RBP26.2■■□□□ 1.79
RAB40B-201ENST00000269347 QRICH1Q2TAL8 776 aa26.2■■□□□ 1.79
RAB40B-201ENST00000269347 GPATCH4Q5T3I0 446 aaKnown RBP26.2■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms