RNA–Protein interactions for RNA: ENST00000267260.4

SRRM4-201, Transcript of serine/arginine repetitive matrix 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRRM4, Length 8,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-201ENST00000267260 C1orf112Q9NSG2 853 aa13.18□□□□□ -0.3
SRRM4-201ENST00000267260 KDM1AO60341 852 aa13.18□□□□□ -0.3
SRRM4-201ENST00000267260 PDE6AP16499 860 aa13.18□□□□□ -0.3
SRRM4-201ENST00000267260 NCAPH2Q6IBW4 605 aa13.18□□□□□ -0.3
SRRM4-201ENST00000267260 KLHL29Q96CT2 875 aa13.18□□□□□ -0.3
SRRM4-201ENST00000267260 TRIM11Q96F44 468 aa13.18□□□□□ -0.3
SRRM4-201ENST00000267260 RBM17Q96I25 401 aaKnown RBP13.18□□□□□ -0.3
SRRM4-201ENST00000267260 MAPK8IP1Q9UQF2 711 aa13.18□□□□□ -0.3
SRRM4-201ENST00000267260 SYCE1LA8MT33 242 aa13.18□□□□□ -0.3
SRRM4-201ENST00000267260 IFNB1P01574 187 aa13.18□□□□□ -0.3
SRRM4-201ENST00000267260 CD19P15391 556 aa13.18□□□□□ -0.3
SRRM4-201ENST00000267260 ZBTB41Q5SVQ8 909 aa13.18□□□□□ -0.3
SRRM4-201ENST00000267260 GJC2Q5T442 439 aaPredicted RBP13.18□□□□□ -0.3
SRRM4-201ENST00000267260 MCF2L2Q86YR7 1114 aa13.18□□□□□ -0.3
SRRM4-201ENST00000267260 UPF3AQ9H1J1 476 aaKnown RBP13.18□□□□□ -0.3
SRRM4-201ENST00000267260 GPCPD1Q9NPB8 672 aa13.18□□□□□ -0.3
SRRM4-201ENST00000267260 COPS6Q7L5N1 327 aa13.18□□□□□ -0.3
SRRM4-201ENST00000267260 LINS1Q8NG48 757 aa13.18□□□□□ -0.3
SRRM4-201ENST00000267260 MED10Q9BTT4 135 aa13.18□□□□□ -0.3
SRRM4-201ENST00000267260 EMILIN1Q9Y6C2 1016 aa13.18□□□□□ -0.3
SRRM4-201ENST00000267260 IVNS1ABPQ9Y6Y0 642 aa13.18□□□□□ -0.3
SRRM4-201ENST00000267260 GUCY2CP25092 1073 aa13.17□□□□□ -0.3
SRRM4-201ENST00000267260 PDE11AQ9HCR9 933 aa13.17□□□□□ -0.3
SRRM4-201ENST00000267260 CAPN11Q9UMQ6 739 aa13.17□□□□□ -0.3
SRRM4-201ENST00000267260 HDAC4P56524 1084 aa13.17□□□□□ -0.3
SRRM4-201ENST00000267260 MRPL28Q13084 256 aaKnown RBP13.17□□□□□ -0.3
SRRM4-201ENST00000267260 ART3Q13508 389 aa13.17□□□□□ -0.3
SRRM4-201ENST00000267260 MRPL50Q8N5N7 158 aaKnown RBP13.17□□□□□ -0.3
SRRM4-201ENST00000267260 MIGA1Q8NAN2 632 aa13.17□□□□□ -0.3
SRRM4-201ENST00000267260 FGD4Q96M96 766 aa13.17□□□□□ -0.3
SRRM4-201ENST00000267260 SLF1Q9BQI6 1058 aa13.17□□□□□ -0.3
SRRM4-201ENST00000267260 PNMA2Q9UL42 364 aa13.17□□□□□ -0.3
SRRM4-201ENST00000267260 A6NJR5 290 aa13.17□□□□□ -0.3
SRRM4-201ENST00000267260 EFCAB14O75071 495 aa13.17□□□□□ -0.3
SRRM4-201ENST00000267260 DBNLQ9UJU6 430 aaKnown RBP13.17□□□□□ -0.3
SRRM4-201ENST00000267260 DMP1Q13316 513 aaPredicted RBP13.17□□□□□ -0.3
SRRM4-201ENST00000267260 FAM133BQ5BKY9 247 aaKnown RBP13.17□□□□□ -0.3
SRRM4-201ENST00000267260 KRT28Q7Z3Y7 464 aa13.17□□□□□ -0.3
SRRM4-201ENST00000267260 TEX11Q8IYF3 940 aa13.17□□□□□ -0.3
SRRM4-201ENST00000267260 FBXL13Q8NEE6 735 aa13.17□□□□□ -0.3
SRRM4-201ENST00000267260 RRAGDQ9NQL2 400 aaPredicted RBP13.17□□□□□ -0.3
SRRM4-201ENST00000267260 KCNJ18B7U540 433 aa13.17□□□□□ -0.3
SRRM4-201ENST00000267260 WBP4O75554 376 aaKnown RBP13.17□□□□□ -0.3
SRRM4-201ENST00000267260 KCNJ12Q14500 433 aa13.17□□□□□ -0.3
SRRM4-201ENST00000267260 C10orf76Q5T2E6 689 aa13.17□□□□□ -0.3
SRRM4-201ENST00000267260 SH3GL3Q99963 347 aa13.17□□□□□ -0.3
SRRM4-201ENST00000267260 MAP3K5Q99683 1374 aa13.17□□□□□ -0.3
SRRM4-201ENST00000267260 HEXIM1O94992 359 aaKnown RBP13.17□□□□□ -0.3
SRRM4-201ENST00000267260 TNNC2P02585 160 aa13.17□□□□□ -0.3
SRRM4-201ENST00000267260 MSH6P52701 1360 aa13.17□□□□□ -0.3
SRRM4-201ENST00000267260 TXKP42681 527 aa13.17□□□□□ -0.3
SRRM4-201ENST00000267260 REXO1Q8N1G1 1221 aaKnown RBP13.17□□□□□ -0.3
SRRM4-201ENST00000267260 PAIP2BQ9ULR5 123 aaKnown RBP13.17□□□□□ -0.3
SRRM4-201ENST00000267260 C6orf118Q5T5N4 469 aa13.16□□□□□ -0.3
SRRM4-201ENST00000267260 DTNBP1Q96EV8 351 aa13.16□□□□□ -0.3
SRRM4-201ENST00000267260 RTCBQ9Y3I0 505 aaKnown RBP13.16□□□□□ -0.3
SRRM4-201ENST00000267260 MRPS15P82914 257 aaKnown RBP13.16□□□□□ -0.3
SRRM4-201ENST00000267260 CEP85Q6P2H3 762 aa13.16□□□□□ -0.3
SRRM4-201ENST00000267260 ZC3H18Q86VM9 953 aaKnown RBP13.16□□□□□ -0.3
SRRM4-201ENST00000267260 SKAP1Q86WV1 359 aa13.16□□□□□ -0.3
SRRM4-201ENST00000267260 NOP53Q9NZM5 478 aaKnown RBP13.16□□□□□ -0.3
SRRM4-201ENST00000267260 SLC13A4Q9UKG4 626 aa13.16□□□□□ -0.3
SRRM4-201ENST00000267260 HNRNPCP07910 306 aaKnown RBP eCLIP13.16□□□□□ -0.3
SRRM4-201ENST00000267260 YARSP54577 528 aaKnown RBP13.16□□□□□ -0.3
SRRM4-201ENST00000267260 MRPL40Q9NQ50 206 aaKnown RBP13.16□□□□□ -0.3
SRRM4-201ENST00000267260 SLC5A4Q9NY91 659 aa13.16□□□□□ -0.3
SRRM4-201ENST00000267260 LONRF3Q496Y0 759 aa13.16□□□□□ -0.3
SRRM4-201ENST00000267260 TRMT10CQ7L0Y3 403 aaKnown RBP13.16□□□□□ -0.3
SRRM4-201ENST00000267260 PLEKHM2Q8IWE5 1019 aa13.16□□□□□ -0.3
SRRM4-201ENST00000267260 MAGEF1Q9HAY2 307 aa13.16□□□□□ -0.3
SRRM4-201ENST00000267260 SUCLA2Q9P2R7 463 aaPredicted RBP13.16□□□□□ -0.3
SRRM4-201ENST00000267260 NSFP46459 744 aaKnown RBP13.16□□□□□ -0.3
SRRM4-201ENST00000267260 ITKQ08881 620 aa13.16□□□□□ -0.3
SRRM4-201ENST00000267260 KLC3Q6P597 504 aa13.16□□□□□ -0.3
SRRM4-201ENST00000267260 DDX42Q86XP3 938 aaKnown RBP eCLIP13.16□□□□□ -0.3
SRRM4-201ENST00000267260 BBS5Q8N3I7 341 aa13.16□□□□□ -0.3
SRRM4-201ENST00000267260 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.16□□□□□ -0.3
SRRM4-201ENST00000267260 H3BRJ5 948 aa13.16□□□□□ -0.3
SRRM4-201ENST00000267260 RASGRF2O14827 1237 aa13.16□□□□□ -0.3
SRRM4-201ENST00000267260 C8orf34Q49A92 452 aa13.16□□□□□ -0.3
SRRM4-201ENST00000267260 TRIM59Q8IWR1 403 aa13.16□□□□□ -0.3
SRRM4-201ENST00000267260 BIN2Q9UBW5 565 aaPredicted RBP13.16□□□□□ -0.3
SRRM4-201ENST00000267260 PARP3Q9Y6F1 533 aa13.16□□□□□ -0.3
SRRM4-201ENST00000267260 SLC27A2O14975 620 aa13.15□□□□□ -0.3
SRRM4-201ENST00000267260 NVLO15381 856 aaKnown RBP13.15□□□□□ -0.3
SRRM4-201ENST00000267260 PYGBP11216 843 aa13.15□□□□□ -0.3
SRRM4-201ENST00000267260 RXRAP19793 462 aa13.15□□□□□ -0.3
SRRM4-201ENST00000267260 MORC3Q14149 939 aa13.15□□□□□ -0.3
SRRM4-201ENST00000267260 EP400NLQ6ZTU2 488 aa13.15□□□□□ -0.3
SRRM4-201ENST00000267260 RABGGTAQ92696 567 aa13.15□□□□□ -0.3
SRRM4-201ENST00000267260 PPIP5K1Q6PFW1 1433 aa13.15□□□□□ -0.3
SRRM4-201ENST00000267260 APOA1P02647 267 aa13.15□□□□□ -0.3
SRRM4-201ENST00000267260 RBM6P78332 1123 aaKnown RBP13.15□□□□□ -0.3
SRRM4-201ENST00000267260 BICC1Q9H694 974 aaKnown RBP13.15□□□□□ -0.3
SRRM4-201ENST00000267260 H7C1D1 291 aa13.15□□□□□ -0.3
SRRM4-201ENST00000267260 CADPS2Q86UW7 1296 aa13.15□□□□□ -0.3
SRRM4-201ENST00000267260 OLFM3Q96PB7 478 aa13.15□□□□□ -0.3
SRRM4-201ENST00000267260 TRAIPQ9BWF2 469 aa13.15□□□□□ -0.3
SRRM4-201ENST00000267260 SERPINB10P48595 397 aa13.15□□□□□ -0.3
SRRM4-201ENST00000267260 DZIP3Q86Y13 1208 aaKnown RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms