RNA–Protein interactions for RNA: ENST00000265598.7

LAMP3-201, Transcript of lysosomal associated membrane protein 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene LAMP3, Length 3,375 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP3-201ENST00000265598 GJA10Q969M2 543 aa12.5□□□□□ -0.41
LAMP3-201ENST00000265598 CCDC17Q96LX7 622 aa12.5□□□□□ -0.41
LAMP3-201ENST00000265598 ADAMTSL1Q8N6G6 1762 aa12.49□□□□□ -0.41
LAMP3-201ENST00000265598 NEMFO60524 1076 aa12.49□□□□□ -0.41
LAMP3-201ENST00000265598 RRAGBQ5VZM2 374 aa12.49□□□□□ -0.41
LAMP3-201ENST00000265598 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.49□□□□□ -0.41
LAMP3-201ENST00000265598 KRT25Q7Z3Z0 450 aa12.49□□□□□ -0.41
LAMP3-201ENST00000265598 NEK8Q86SG6 692 aa12.49□□□□□ -0.41
LAMP3-201ENST00000265598 JDP2Q8WYK2 163 aa12.49□□□□□ -0.41
LAMP3-201ENST00000265598 ZMYND12Q9H0C1 365 aa12.49□□□□□ -0.41
LAMP3-201ENST00000265598 KANSL2Q9H9L4 492 aa12.49□□□□□ -0.41
LAMP3-201ENST00000265598 GJA3Q9Y6H8 435 aa12.49□□□□□ -0.41
LAMP3-201ENST00000265598 PSDA5PKW4 1024 aaPredicted RBP12.49□□□□□ -0.41
LAMP3-201ENST00000265598 USP17L15C9J2P7 530 aa12.49□□□□□ -0.41
LAMP3-201ENST00000265598 USP17L13C9JLJ4 530 aa12.49□□□□□ -0.41
LAMP3-201ENST00000265598 USP17L11C9JVI0 530 aa12.49□□□□□ -0.41
LAMP3-201ENST00000265598 USP17L18D6R9N7 530 aa12.49□□□□□ -0.41
LAMP3-201ENST00000265598 USP17L22D6RA61 530 aa12.49□□□□□ -0.41
LAMP3-201ENST00000265598 USP17L17D6RBQ6 530 aa12.49□□□□□ -0.41
LAMP3-201ENST00000265598 USP17L19D6RCP7 530 aa12.49□□□□□ -0.41
LAMP3-201ENST00000265598 USP17L20D6RJB6 530 aa12.49□□□□□ -0.41
LAMP3-201ENST00000265598 POLD1P28340 1107 aa12.49□□□□□ -0.41
LAMP3-201ENST00000265598 USP17L24Q0WX57 530 aa12.49□□□□□ -0.41
LAMP3-201ENST00000265598 R3HDM1Q15032 1099 aaKnown RBP12.49□□□□□ -0.41
LAMP3-201ENST00000265598 RSBN1LQ6PCB5 846 aaPredicted RBP12.49□□□□□ -0.41
LAMP3-201ENST00000265598 USP17L6PQ6QN14 398 aa12.49□□□□□ -0.41
LAMP3-201ENST00000265598 TMEM39BQ9GZU3 492 aa12.49□□□□□ -0.41
LAMP3-201ENST00000265598 PIM2Q9P1W9 311 aa12.49□□□□□ -0.41
LAMP3-201ENST00000265598 SCN9AQ15858 1988 aa12.49□□□□□ -0.41
LAMP3-201ENST00000265598 SHTN1A0MZ66 631 aa12.49□□□□□ -0.41
LAMP3-201ENST00000265598 TMEM232C9JQI7 657 aa12.49□□□□□ -0.41
LAMP3-201ENST00000265598 PES1O00541 588 aaKnown RBP12.49□□□□□ -0.41
LAMP3-201ENST00000265598 ZBTB22O15209 634 aa12.49□□□□□ -0.41
LAMP3-201ENST00000265598 FMR1Q06787 632 aaKnown RBP eCLIP12.49□□□□□ -0.41
LAMP3-201ENST00000265598 CUL4BQ13620 913 aa12.49□□□□□ -0.41
LAMP3-201ENST00000265598 TRMT1Q9NXH9 659 aaKnown RBP12.49□□□□□ -0.41
LAMP3-201ENST00000265598 PCDHA1Q9Y5I3 950 aa12.49□□□□□ -0.41
LAMP3-201ENST00000265598 F5H6K3 240 aa12.48□□□□□ -0.41
LAMP3-201ENST00000265598 ZNF500O60304 480 aaPredicted RBP12.48□□□□□ -0.41
LAMP3-201ENST00000265598 TPM3P06753 285 aa12.48□□□□□ -0.41
LAMP3-201ENST00000265598 NT5C2P49902 561 aa12.48□□□□□ -0.41
LAMP3-201ENST00000265598 MDM2Q00987 491 aaPredicted RBP12.48□□□□□ -0.41
LAMP3-201ENST00000265598 KLRC3Q07444 240 aa12.48□□□□□ -0.41
LAMP3-201ENST00000265598 GOLGA8FQ08AF8 430 aa12.48□□□□□ -0.41
LAMP3-201ENST00000265598 GOLGA8DPQ0D2H9 430 aa12.48□□□□□ -0.41
LAMP3-201ENST00000265598 POTEDQ86YR6 584 aa12.48□□□□□ -0.41
LAMP3-201ENST00000265598 DPF2Q92785 391 aa12.48□□□□□ -0.41
LAMP3-201ENST00000265598 EEF2KMTQ96G04 330 aa12.48□□□□□ -0.41
LAMP3-201ENST00000265598 DDX60LQ5H9U9 1706 aaKnown RBP12.48□□□□□ -0.41
LAMP3-201ENST00000265598 TDP2O95551 362 aa12.48□□□□□ -0.41
LAMP3-201ENST00000265598 ZNF592Q92610 1267 aa12.48□□□□□ -0.41
LAMP3-201ENST00000265598 PSTPIP2Q9H939 334 aa12.48□□□□□ -0.41
LAMP3-201ENST00000265598 SAMSN1Q9NSI8 373 aaKnown RBP12.48□□□□□ -0.41
LAMP3-201ENST00000265598 PNMA6FA0A0J9YX94 578 aa12.47□□□□□ -0.41
LAMP3-201ENST00000265598 FAM237AA0A1B0GTK4 181 aa12.47□□□□□ -0.41
LAMP3-201ENST00000265598 NCAPHQ15003 741 aa12.47□□□□□ -0.41
LAMP3-201ENST00000265598 GPATCH4Q5T3I0 446 aaKnown RBP12.47□□□□□ -0.41
LAMP3-201ENST00000265598 GALNT17Q6IS24 598 aa12.47□□□□□ -0.41
LAMP3-201ENST00000265598 C16orf45Q96MC5 204 aaPredicted RBP12.47□□□□□ -0.41
LAMP3-201ENST00000265598 IDI2Q9BXS1 227 aa12.47□□□□□ -0.41
LAMP3-201ENST00000265598 RIOX1Q9H6W3 641 aa12.47□□□□□ -0.41
LAMP3-201ENST00000265598 DACH1Q9UI36 760 aa12.47□□□□□ -0.41
LAMP3-201ENST00000265598 SSBP05455 408 aaKnown RBP eCLIP12.47□□□□□ -0.41
LAMP3-201ENST00000265598 OR52Z1P0C646 297 aa12.47□□□□□ -0.41
LAMP3-201ENST00000265598 ECE1P42892 770 aa12.47□□□□□ -0.41
LAMP3-201ENST00000265598 JAG1P78504 1218 aa12.47□□□□□ -0.41
LAMP3-201ENST00000265598 QRICH1Q2TAL8 776 aa12.47□□□□□ -0.41
LAMP3-201ENST00000265598 MRFAP1L1Q96HT8 127 aa12.47□□□□□ -0.41
LAMP3-201ENST00000265598 SPDYE2BA6NHP3 402 aa12.47□□□□□ -0.41
LAMP3-201ENST00000265598 MYO1BO43795 1136 aa12.47□□□□□ -0.41
LAMP3-201ENST00000265598 SPDYE6P0CI01 402 aa12.47□□□□□ -0.41
LAMP3-201ENST00000265598 SKILP12757 684 aa12.47□□□□□ -0.41
LAMP3-201ENST00000265598 NBPF9Q3BBW0 867 aa12.47□□□□□ -0.41
LAMP3-201ENST00000265598 DALRD3Q5D0E6 543 aaKnown RBP12.47□□□□□ -0.41
LAMP3-201ENST00000265598 TMEM179Q6ZVK1 233 aa12.47□□□□□ -0.41
LAMP3-201ENST00000265598 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.47□□□□□ -0.41
LAMP3-201ENST00000265598 CDK5RAP3Q96JB5 506 aa12.47□□□□□ -0.41
LAMP3-201ENST00000265598 ZNF70Q9UC06 446 aaPredicted RBP12.47□□□□□ -0.41
LAMP3-201ENST00000265598 ZBTB5O15062 677 aa12.46□□□□□ -0.41
LAMP3-201ENST00000265598 PPP1R11O60927 126 aaPredicted RBP12.46□□□□□ -0.41
LAMP3-201ENST00000265598 OFD1O75665 1012 aa12.46□□□□□ -0.41
LAMP3-201ENST00000265598 LONP1P36776 959 aaKnown RBP12.46□□□□□ -0.41
LAMP3-201ENST00000265598 HDLBPQ00341 1268 aaKnown RBP12.46□□□□□ -0.41
LAMP3-201ENST00000265598 CXCL9Q07325 125 aa12.46□□□□□ -0.41
LAMP3-201ENST00000265598 CDC37Q16543 378 aaPredicted RBP12.46□□□□□ -0.41
LAMP3-201ENST00000265598 CALCRLQ16602 461 aa12.46□□□□□ -0.41
LAMP3-201ENST00000265598 SARM1Q6SZW1 724 aa12.46□□□□□ -0.41
LAMP3-201ENST00000265598 CTNND2Q9UQB3 1225 aa12.46□□□□□ -0.41
LAMP3-201ENST00000265598 NDUFB10O96000 172 aa12.46□□□□□ -0.41
LAMP3-201ENST00000265598 MRPL12P52815 198 aaKnown RBP12.46□□□□□ -0.41
LAMP3-201ENST00000265598 RRP1BQ14684 758 aaKnown RBP12.46□□□□□ -0.41
LAMP3-201ENST00000265598 CABP7Q86V35 215 aa12.46□□□□□ -0.41
LAMP3-201ENST00000265598 MLKLQ8NB16 471 aa12.46□□□□□ -0.41
LAMP3-201ENST00000265598 CUL5Q93034 780 aa12.46□□□□□ -0.41
LAMP3-201ENST00000265598 ZNRF3Q9ULT6 936 aa12.46□□□□□ -0.41
LAMP3-201ENST00000265598 CDK5RAP2Q96SN8 1893 aa12.46□□□□□ -0.42
LAMP3-201ENST00000265598 IGKV6D-41A0A0C4DH26 115 aa12.46□□□□□ -0.42
LAMP3-201ENST00000265598 KCNA3P22001 575 aa12.46□□□□□ -0.42
LAMP3-201ENST00000265598 FCHSD1Q86WN1 690 aa12.46□□□□□ -0.42
LAMP3-201ENST00000265598 ACER1Q8TDN7 264 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms