RNA–Protein interactions for RNA: ENST00000264640.8

SMARCE1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-201ENST00000264640 ZSCAN30Q86W11 494 aa8.22□□□□□ -1.09
SMARCE1-201ENST00000264640 CCAR1Q8IX12 1150 aaKnown RBP8.22□□□□□ -1.09
SMARCE1-201ENST00000264640 TRMT44Q8IYL2 757 aaKnown RBP8.22□□□□□ -1.09
SMARCE1-201ENST00000264640 GPRC5AQ8NFJ5 357 aa8.22□□□□□ -1.09
SMARCE1-201ENST00000264640 ATXN2LQ8WWM7 1075 aaKnown RBP8.22□□□□□ -1.09
SMARCE1-201ENST00000264640 USP6NLQ92738 828 aa8.22□□□□□ -1.09
SMARCE1-201ENST00000264640 MAP4K1Q92918 833 aa8.22□□□□□ -1.09
SMARCE1-201ENST00000264640 TRIM43Q96BQ3 446 aaPredicted RBP8.22□□□□□ -1.09
SMARCE1-201ENST00000264640 P2RX7Q99572 595 aaKnown RBP8.22□□□□□ -1.09
SMARCE1-201ENST00000264640 ZNF576Q9H609 170 aa8.22□□□□□ -1.09
SMARCE1-201ENST00000264640 GPR108Q9NPR9 543 aa8.22□□□□□ -1.09
SMARCE1-201ENST00000264640 CCDC39Q9UFE4 941 aa8.22□□□□□ -1.09
SMARCE1-201ENST00000264640 PA2G4Q9UQ80 394 aaKnown RBP8.22□□□□□ -1.09
SMARCE1-201ENST00000264640 RBM8AQ9Y5S9 174 aaKnown RBP8.22□□□□□ -1.09
SMARCE1-201ENST00000264640 LRRC37A2A6NM11 1700 aa8.22□□□□□ -1.09
SMARCE1-201ENST00000264640 FOCADQ5VW36 1801 aa8.22□□□□□ -1.09
SMARCE1-201ENST00000264640 RNF40O75150 1001 aa8.21□□□□□ -1.1
SMARCE1-201ENST00000264640 F13A1P00488 732 aa8.21□□□□□ -1.1
SMARCE1-201ENST00000264640 HMGB1P09429 215 aaKnown RBP8.21□□□□□ -1.1
SMARCE1-201ENST00000264640 IFIT1P09914 478 aaKnown RBP8.21□□□□□ -1.1
SMARCE1-201ENST00000264640 MAPK4P31152 587 aa8.21□□□□□ -1.1
SMARCE1-201ENST00000264640 HERVK_113P62684 666 aa8.21□□□□□ -1.1
SMARCE1-201ENST00000264640 MRPS5P82675 430 aaKnown RBP8.21□□□□□ -1.1
SMARCE1-201ENST00000264640 MAP3K10Q02779 954 aa8.21□□□□□ -1.1
SMARCE1-201ENST00000264640 NMIQ13287 307 aaPredicted RBP8.21□□□□□ -1.1
SMARCE1-201ENST00000264640 PKP1Q13835 747 aa8.21□□□□□ -1.1
SMARCE1-201ENST00000264640 NECTIN1Q15223 517 aa8.21□□□□□ -1.1
SMARCE1-201ENST00000264640 PUM3Q15397 648 aaKnown RBP8.21□□□□□ -1.1
SMARCE1-201ENST00000264640 Q3C1V9 767 aa8.21□□□□□ -1.1
SMARCE1-201ENST00000264640 TSGA10IPQ3SY00 556 aa8.21□□□□□ -1.1
SMARCE1-201ENST00000264640 SWT1Q5T5J6 900 aaKnown RBP8.21□□□□□ -1.1
SMARCE1-201ENST00000264640 WDR78Q5VTH9 848 aa8.21□□□□□ -1.1
SMARCE1-201ENST00000264640 FOXD4L5Q5VV16 416 aaPredicted RBP8.21□□□□□ -1.1
SMARCE1-201ENST00000264640 SLC39A5Q6ZMH5 540 aa8.21□□□□□ -1.1
SMARCE1-201ENST00000264640 PLEKHH3Q7Z736 793 aa8.21□□□□□ -1.1
SMARCE1-201ENST00000264640 SLF2Q8IX21 1173 aa8.21□□□□□ -1.1
SMARCE1-201ENST00000264640 TRPV1Q8NER1 839 aa8.21□□□□□ -1.1
SMARCE1-201ENST00000264640 GPT2Q8TD30 523 aa8.21□□□□□ -1.1
SMARCE1-201ENST00000264640 FOXD4L4Q8WXT5 416 aaPredicted RBP8.21□□□□□ -1.1
SMARCE1-201ENST00000264640 LPAR1Q92633 364 aa8.21□□□□□ -1.1
SMARCE1-201ENST00000264640 FERMT2Q96AC1 680 aa8.21□□□□□ -1.1
SMARCE1-201ENST00000264640 IDI2Q9BXS1 227 aa8.21□□□□□ -1.1
SMARCE1-201ENST00000264640 CCDC8Q9H0W5 538 aaPredicted RBP8.21□□□□□ -1.1
SMARCE1-201ENST00000264640 PRDM12Q9H4Q4 367 aa8.21□□□□□ -1.1
SMARCE1-201ENST00000264640 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.21□□□□□ -1.1
SMARCE1-201ENST00000264640 RRAGDQ9NQL2 400 aaPredicted RBP8.21□□□□□ -1.1
SMARCE1-201ENST00000264640 HCN4Q9Y3Q4 1203 aa8.21□□□□□ -1.1
SMARCE1-201ENST00000264640 SYNGAP1Q96PV0 1343 aa8.21□□□□□ -1.1
SMARCE1-201ENST00000264640 CHD7Q9P2D1 2997 aa8.21□□□□□ -1.1
SMARCE1-201ENST00000264640 SLC27A2O14975 620 aa8.2□□□□□ -1.1
SMARCE1-201ENST00000264640 SLC5A1P13866 664 aa8.2□□□□□ -1.1
SMARCE1-201ENST00000264640 SYT1P21579 422 aa8.2□□□□□ -1.1
SMARCE1-201ENST00000264640 FGFR2P21802 821 aa8.2□□□□□ -1.1
SMARCE1-201ENST00000264640 CYP2C19P33261 490 aa8.2□□□□□ -1.1
SMARCE1-201ENST00000264640 ERVK-9P63128 1117 aa8.2□□□□□ -1.1
SMARCE1-201ENST00000264640 ERVK-24P63145 666 aa8.2□□□□□ -1.1
SMARCE1-201ENST00000264640 MAP2K5Q13163 448 aa8.2□□□□□ -1.1
SMARCE1-201ENST00000264640 SHROOM1Q2M3G4 852 aaPredicted RBP8.2□□□□□ -1.1
SMARCE1-201ENST00000264640 RABL6Q3YEC7 729 aaPredicted RBP8.2□□□□□ -1.1
SMARCE1-201ENST00000264640 TNNI3KQ59H18 835 aa8.2□□□□□ -1.1
SMARCE1-201ENST00000264640 MFSD14CQ5VZR4 134 aa8.2□□□□□ -1.1
SMARCE1-201ENST00000264640 PADI6Q6TGC4 694 aa8.2□□□□□ -1.1
SMARCE1-201ENST00000264640 ALYREFQ86V81 257 aaKnown RBP8.2□□□□□ -1.1
SMARCE1-201ENST00000264640 TIFAQ96CG3 184 aa8.2□□□□□ -1.1
SMARCE1-201ENST00000264640 EAF2Q96CJ1 260 aaPredicted RBP8.2□□□□□ -1.1
SMARCE1-201ENST00000264640 NAP1L5Q96NT1 182 aaPredicted RBP8.2□□□□□ -1.1
SMARCE1-201ENST00000264640 GAS2L1Q99501 681 aaPredicted RBP8.2□□□□□ -1.1
SMARCE1-201ENST00000264640 LRFN3Q9BTN0 628 aa8.2□□□□□ -1.1
SMARCE1-201ENST00000264640 TMUB1Q9BVT8 246 aa8.2□□□□□ -1.1
SMARCE1-201ENST00000264640 C1QTNF1Q9BXJ1 281 aa8.2□□□□□ -1.1
SMARCE1-201ENST00000264640 SIL1Q9H173 461 aa8.2□□□□□ -1.1
SMARCE1-201ENST00000264640 WDR70Q9NW82 654 aa8.2□□□□□ -1.1
SMARCE1-201ENST00000264640 RBPJLQ9UBG7 517 aa8.2□□□□□ -1.1
SMARCE1-201ENST00000264640 FPGT-TNNI3KV9GXZ4 949 aa8.2□□□□□ -1.1
SMARCE1-201ENST00000264640 ZNFX1Q9P2E3 1918 aaKnown RBP8.2□□□□□ -1.1
SMARCE1-201ENST00000264640 ZNF236Q9UL36 1845 aa8.19□□□□□ -1.1
SMARCE1-201ENST00000264640 SYCE3A1L190 88 aa8.19□□□□□ -1.1
SMARCE1-201ENST00000264640 USP17L5A8MUK1 530 aa8.19□□□□□ -1.1
SMARCE1-201ENST00000264640 GRXCR1A8MXD5 290 aa8.19□□□□□ -1.1
SMARCE1-201ENST00000264640 KBTBD13C9JR72 458 aa8.19□□□□□ -1.1
SMARCE1-201ENST00000264640 IGFBP4P22692 258 aa8.19□□□□□ -1.1
SMARCE1-201ENST00000264640 GJB2P29033 226 aa8.19□□□□□ -1.1
SMARCE1-201ENST00000264640 GGCXP38435 758 aa8.19□□□□□ -1.1
SMARCE1-201ENST00000264640 IL15P40933 162 aaPredicted RBP8.19□□□□□ -1.1
SMARCE1-201ENST00000264640 ADCYAP1R1P41586 468 aa8.19□□□□□ -1.1
SMARCE1-201ENST00000264640 BTDP43251 543 aa8.19□□□□□ -1.1
SMARCE1-201ENST00000264640 KRT85P78386 507 aa8.19□□□□□ -1.1
SMARCE1-201ENST00000264640 TFF2Q03403 129 aa8.19□□□□□ -1.1
SMARCE1-201ENST00000264640 PTH1RQ03431 593 aa8.19□□□□□ -1.1
SMARCE1-201ENST00000264640 ADGRE1Q14246 886 aa8.19□□□□□ -1.1
SMARCE1-201ENST00000264640 SH3D19Q5HYK7 790 aa8.19□□□□□ -1.1
SMARCE1-201ENST00000264640 LARP1BQ659C4 914 aaKnown RBP8.19□□□□□ -1.1
SMARCE1-201ENST00000264640 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.19□□□□□ -1.1
SMARCE1-201ENST00000264640 DZIP1Q86YF9 867 aaKnown RBP8.19□□□□□ -1.1
SMARCE1-201ENST00000264640 CCDC83Q8IWF9 413 aa8.19□□□□□ -1.1
SMARCE1-201ENST00000264640 OSBPL5Q9H0X9 879 aaPredicted RBP8.19□□□□□ -1.1
SMARCE1-201ENST00000264640 BOLA2Q9H3K6 86 aa8.19□□□□□ -1.1
SMARCE1-201ENST00000264640 EPHX3Q9H6B9 360 aa8.19□□□□□ -1.1
SMARCE1-201ENST00000264640 HELLSQ9NRZ9 838 aa8.19□□□□□ -1.1
SMARCE1-201ENST00000264640 TMOD4Q9NZQ9 345 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms